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Add Genome.contigs. Fixes #140. #141

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merged 1 commit into from
Mar 29, 2016
Merged

Add Genome.contigs. Fixes #140. #141

merged 1 commit into from
Mar 29, 2016

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hammer
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@hammer hammer commented Mar 25, 2016

This change is Reviewable

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Coverage Status

Coverage decreased (-0.04%) to 80.054% when pulling 67a87ec on contigs into 300f5a7 on master.

"""
Returns all contigs ("seqname") for all genes
"""
return self.db.query_feature_values("seqname", "gene")
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Eventually I'd like to add a Chromosome object but for now it's good to have just the names available. LGTM

@iskandr iskandr merged commit 327c7e7 into master Mar 29, 2016
@iskandr iskandr deleted the contigs branch March 29, 2016 20:03
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3 participants