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Have you tried building docker image with ATL_TOMCAT_SCHEME, ATL_TOMCAT_SECURE and others?
Those environment variables don't work with this image. If you want to use those variables, use the official Atlassian image.
After configuring NGINX with https, you have to mount server.xml file with the customized config to the container.
I would be great to add https feature in jira.
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