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run_all_tests.yml
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name: Run all tests
on:
schedule:
- cron: '0 5 * * *' # once per day at midnight ET
push:
tags: # run only on new tags that follow semver
- '/^[0-9]+(\.[0-9]+)?(\.[0-9]+)?$/'
workflow_dispatch:
jobs:
run-all-tests:
# the only differences between this job and "run_tests.yml" is the "strategy.matrix.include" and the upload
# distributions step.
# GitHub Actions does not yet support YAML anchors, easily reusable components, or easy dynamic matrix
# configurations based on the github event, so this job is duplicated for the most part
name: ${{ matrix.name }}
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}-${{ matrix.name }}
cancel-in-progress: true
strategy:
fail-fast: false
matrix:
include:
- { name: linux-python3.8-minimum , test-tox-env: pytest-py38-minimum , python-ver: "3.8" , os: ubuntu-latest }
- { name: linux-python3.9 , test-tox-env: pytest-py39-pinned , python-ver: "3.9" , os: ubuntu-latest }
- { name: linux-python3.10 , test-tox-env: pytest-py310-pinned , python-ver: "3.10", os: ubuntu-latest }
- { name: linux-python3.11 , test-tox-env: pytest-py311-pinned , python-ver: "3.11", os: ubuntu-latest }
- { name: linux-python3.11-optional , test-tox-env: pytest-py311-optional-pinned , python-ver: "3.11", os: ubuntu-latest }
- { name: linux-python3.12 , test-tox-env: pytest-py312-pinned , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-python3.12-upgraded , test-tox-env: pytest-py312-upgraded , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-python3.12-prerelease , test-tox-env: pytest-py312-prerelease , python-ver: "3.12", os: ubuntu-latest }
- { name: windows-python3.8-minimum , test-tox-env: pytest-py38-minimum , python-ver: "3.8" , os: windows-latest }
- { name: windows-python3.9 , test-tox-env: pytest-py39-pinned , python-ver: "3.9" , os: windows-latest }
- { name: windows-python3.10 , test-tox-env: pytest-py310-pinned , python-ver: "3.10", os: windows-latest }
- { name: windows-python3.11 , test-tox-env: pytest-py311-pinned , python-ver: "3.11", os: windows-latest }
- { name: windows-python3.11-optional , test-tox-env: pytest-py311-optional-pinned , python-ver: "3.11", os: windows-latest }
- { name: windows-python3.12 , test-tox-env: pytest-py312-pinned , python-ver: "3.12", os: windows-latest }
- { name: windows-python3.12-upgraded , test-tox-env: pytest-py312-upgraded , python-ver: "3.12", os: windows-latest }
- { name: windows-python3.12-prerelease , test-tox-env: pytest-py312-prerelease , python-ver: "3.12", os: windows-latest }
- { name: macos-python3.8-minimum , test-tox-env: pytest-py38-minimum , python-ver: "3.8" , os: macos-13 }
- { name: macos-python3.9 , test-tox-env: pytest-py39-pinned , python-ver: "3.9" , os: macos-13 }
- { name: macos-python3.10 , test-tox-env: pytest-py310-pinned , python-ver: "3.10", os: macos-latest }
- { name: macos-python3.11 , test-tox-env: pytest-py311-pinned , python-ver: "3.11", os: macos-latest }
- { name: macos-python3.11-optional , test-tox-env: pytest-py311-optional-pinned , python-ver: "3.11", os: macos-latest }
- { name: macos-python3.12 , test-tox-env: pytest-py312-pinned , python-ver: "3.12", os: macos-latest }
- { name: macos-python3.12-upgraded , test-tox-env: pytest-py312-upgraded , python-ver: "3.12", os: macos-latest }
- { name: macos-python3.12-prerelease , test-tox-env: pytest-py312-prerelease , python-ver: "3.12", os: macos-latest }
steps:
- name: Checkout repo with submodules
uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required to determine the version
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-ver }}
- name: Install build dependencies
run: |
python -m pip install --upgrade pip
python -m pip install tox
python -m pip list
- name: Run tox tests
run: |
tox -e ${{ matrix.test-tox-env }}
- name: Build wheel and source distribution
run: |
tox -e build
ls -1 dist
- name: Test installation from a wheel
run: |
tox -e wheelinstall --installpkg dist/*-none-any.whl
- name: Test installation from a source distribution
run: |
tox -e wheelinstall --installpkg dist/*.tar.gz
run-all-gallery-tests:
name: ${{ matrix.name }}
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}-${{ matrix.name }}
cancel-in-progress: true
strategy:
fail-fast: false
matrix:
include:
- { name: linux-gallery-python3.8-minimum , test-tox-env: gallery-py38-minimum , python-ver: "3.8" , os: ubuntu-latest }
- { name: linux-gallery-python3.11-optional , test-tox-env: gallery-py311-optional-pinned , python-ver: "3.11", os: ubuntu-latest }
- { name: linux-gallery-python3.12-upgraded , test-tox-env: gallery-py312-upgraded , python-ver: "3.12", os: ubuntu-latest }
- { name: linux-gallery-python3.12-prerelease , test-tox-env: gallery-py312-prerelease , python-ver: "3.12", os: ubuntu-latest }
- { name: windows-gallery-python3.8-minimum , test-tox-env: gallery-py38-minimum , python-ver: "3.8" , os: windows-latest }
- { name: windows-gallery-python3.11-optional , test-tox-env: gallery-py311-optional-pinned , python-ver: "3.11", os: windows-latest }
- { name: windows-gallery-python3.12-upgraded , test-tox-env: gallery-py312-upgraded , python-ver: "3.12", os: windows-latest }
- { name: windows-gallery-python3.12-prerelease, test-tox-env: gallery-py312-prerelease , python-ver: "3.12", os: windows-latest }
- { name: macos-gallery-python3.8-minimum , test-tox-env: gallery-py38-minimum , python-ver: "3.8" , os: macos-13 }
- { name: macos-gallery-python3.11-optional , test-tox-env: gallery-py311-optional-pinned , python-ver: "3.11", os: macos-latest }
- { name: macos-gallery-python3.12-upgraded , test-tox-env: gallery-py312-upgraded , python-ver: "3.12", os: macos-latest }
- { name: macos-gallery-python3.12-prerelease , test-tox-env: gallery-py312-prerelease , python-ver: "3.12", os: macos-latest }
steps:
- name: Checkout repo with submodules
uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required to determine the version
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-ver }}
- name: Install build dependencies
run: |
python -m pip install --upgrade pip
python -m pip install tox
python -m pip list
- name: Run tox tests
run: |
tox -e ${{ matrix.test-tox-env }}
run-all-tests-on-conda:
name: ${{ matrix.name }}
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0} # needed for conda environment to work
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}-${{ matrix.name }}
cancel-in-progress: true
strategy:
fail-fast: false
matrix:
include:
- { name: conda-linux-python3.8-minimum , test-tox-env: pytest-py38-minimum , python-ver: "3.8" , os: ubuntu-latest }
- { name: conda-linux-python3.9 , test-tox-env: pytest-py39-pinned , python-ver: "3.9" , os: ubuntu-latest }
- { name: conda-linux-python3.10 , test-tox-env: pytest-py310-pinned , python-ver: "3.10", os: ubuntu-latest }
- { name: conda-linux-python3.11 , test-tox-env: pytest-py311-pinned , python-ver: "3.11", os: ubuntu-latest }
- { name: conda-linux-python3.11-optional , test-tox-env: pytest-py311-optional-pinned , python-ver: "3.11", os: ubuntu-latest }
- { name: conda-linux-python3.12 , test-tox-env: pytest-py312-pinned , python-ver: "3.12", os: ubuntu-latest }
- { name: conda-linux-python3.12-upgraded , test-tox-env: pytest-py312-upgraded , python-ver: "3.12", os: ubuntu-latest }
- { name: conda-linux-python3.12-prerelease , test-tox-env: pytest-py312-prerelease , python-ver: "3.12", os: ubuntu-latest }
steps:
- name: Checkout repo with submodules
uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required to determine the version
- name: Set up Conda
uses: conda-incubator/setup-miniconda@v3
with:
auto-update-conda: true
python-version: ${{ matrix.python-ver }}
channels: conda-forge
mamba-version: "*"
- name: Install build dependencies
run: |
conda config --set always_yes yes --set changeps1 no
conda info
mamba install -c conda-forge "tox>=4"
- name: Conda reporting
run: |
conda info
conda config --show-sources
conda list --show-channel-urls
# NOTE tox installs packages from PyPI not conda-forge...
- name: Run tox tests
run: |
tox -e ${{ matrix.test-tox-env }}
- name: Build wheel and source distribution
run: |
tox -e build
ls -1 dist
- name: Test installation from a wheel
run: |
tox -e wheelinstall --installpkg dist/*-none-any.whl
- name: Test installation from a source distribution
run: |
tox -e wheelinstall --installpkg dist/*.tar.gz
run-ros3-tests:
name: ${{ matrix.name }}
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -l {0} # necessary for conda
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}-${{ matrix.name }}
cancel-in-progress: true
strategy:
fail-fast: false
matrix:
include:
- { name: linux-python3.12-ros3 , python-ver: "3.12", os: ubuntu-latest }
- { name: windows-python3.12-ros3 , python-ver: "3.12", os: windows-latest }
- { name: macos-python3.12-ros3 , python-ver: "3.12", os: macos-latest }
steps:
- name: Checkout repo with submodules
uses: actions/checkout@v4
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required to determine the version
- name: Set up Conda
uses: conda-incubator/setup-miniconda@v3
with:
auto-update-conda: true
activate-environment: ros3
environment-file: environment-ros3.yml
python-version: ${{ matrix.python-ver }}
channels: conda-forge
auto-activate-base: false
mamba-version: "*"
- name: Install run dependencies
run: |
pip install .
pip list
- name: Conda reporting
run: |
conda info
conda config --show-sources
conda list --show-channel-urls
- name: Run ros3 tests # TODO include gallery tests after they are written
run: |
pytest tests/unit/test_io_hdf5_streaming.py