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_load_data.py python script interface never used #37

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EricR86 opened this issue Apr 25, 2017 · 2 comments
Open

_load_data.py python script interface never used #37

EricR86 opened this issue Apr 25, 2017 · 2 comments
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enhancement New feature or request minor

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@EricR86
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EricR86 commented Apr 25, 2017

Original report (archived issue) by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).


Currently in _load_data.py, there is an ability to call the python script with a defined interface (parse_args in genomedata/_load_data.py) . This interface is never used. The name "genomedata-load-data" instead interfaces with the c program used to load in track data from stdin.

There should be consideration to re-open this interface or use this interface instead of the existing for "genomedata-load-data" since it contains far more options and is more flexible than the c program.

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EricR86 commented Apr 25, 2017

Original comment by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).


  • changed title from "_load_data.py python script never used" to "_load_data.py python script interface never used"

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EricR86 commented Apr 25, 2017

Original comment by Eric Roberts (Bitbucket: ericr86, GitHub: ericr86).


Also notabily the python interface attempts to use "chunk size" but is never actually used by the load_data function

@EricR86 EricR86 added minor enhancement New feature or request labels Apr 16, 2020
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