Database corruption during purge

[elektrinis]

The problem

I've run recorder.purge service to purge and repack everything above 5 days. It was a relatively large DB, over 10GB.
It's running on proxmox VM with 4 cores Ryzen 4600G and 16GB of RAM. When run, RAM peaked at 97% right away, and CPU was jumping around 10-35% for some time.
After an hour I noticed that new DB takes up only 18MB and there's a backup of corrupt DB saved, still full 10GB.
Possibly another issue: after everything, RAM usage remained at 96%. It was not released?

What version of Home Assistant Core has the issue?

core-2024.4.3

What type of installation are you running?

Home Assistant OS

Anything in the logs that might be useful for us?

Trere are three error entires in HA-core logs. One says there's a copy saved, the other two are:


1. Logger: homeassistant.components.recorder.util
Source: components/recorder/util.py:141
integration: Recorder (documentation, issues)
First occurred: 15:59:05 (1 occurrences)
Last logged: 15:59:05

Error executing query: (sqlite3.DatabaseError) database disk image is malformed [SQL: UPDATE states SET old_state_id=? WHERE states.old_state_id IN (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, 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?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)] [parameters: (None, 4603904, 4603905, 4603906, 4603907, 4603908, 4603909, 4603910, 4603911, 4603912, 4603913, 4603914, 4603915, 4603916, 4603917, 4603918, 4603919, 4603920, 4603921, 4603922, 4603923, 4603924, 4603925, 4603926, 4603927, 4603928, 4603929, 4603930, 4603931, 4603932, 4603933, 4603934, 4603935, 4603936, 4603937, 4603938, 4603939, 4603940, 4603941, 4603942, 4603943, 4603944, 4603945, 4603946, 4603947, 4603948, 4603949, 4603950, 4603951, 4603952 ... 3901 parameters truncated ... 4603854, 4603855, 4603856, 4603857, 4603858, 4603859, 4603860, 4603861, 4603862, 4603863, 4603864, 4603865, 4603866, 4603867, 4603868, 4603869, 4603870, 4603871, 4603872, 4603873, 4603874, 4603875, 4603876, 4603877, 4603878, 4603879, 4603880, 4603881, 4603882, 4603883, 4603884, 4603885, 4603886, 4603887, 4603888, 4603889, 4603890, 4603891, 4603892, 4603893, 4603894, 4603895, 4603896, 4603897, 4603898, 4603899, 4603900, 4603901, 4603902, 4603903)] (Background on this error at: https://sqlalche.me/e/20/4xp6)
Traceback (most recent call last):
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1971, in _exec_single_context
    self.dialect.do_execute(
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/default.py", line 919, in do_execute
    cursor.execute(statement, parameters)
sqlite3.DatabaseError: database disk image is malformed

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "/usr/src/homeassistant/homeassistant/components/recorder/util.py", line 141, in session_scope
    yield session
  File "/usr/src/homeassistant/homeassistant/components/recorder/purge.py", line 87, in purge_old_data
    has_more_to_purge |= _purge_states_and_attributes_ids(
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/src/homeassistant/homeassistant/components/recorder/purge.py", line 200, in _purge_states_and_attributes_ids
    _purge_state_ids(instance, session, state_ids)
  File "/usr/src/homeassistant/homeassistant/components/recorder/purge.py", line 519, in _purge_state_ids
    disconnected_rows = session.execute(disconnect_states_rows(state_ids))
                        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/session.py", line 2306, in execute
    return self._execute_internal(
           ^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/session.py", line 2191, in _execute_internal
    result: Result[Any] = compile_state_cls.orm_execute_statement(
                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/bulk_persistence.py", line 1617, in orm_execute_statement
    return super().orm_execute_statement(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/context.py", line 293, in orm_execute_statement
    result = conn.execute(
             ^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1422, in execute
    return meth(
           ^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/sql/lambdas.py", line 603, in _execute_on_connection
    return connection._execute_clauseelement(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1644, in _execute_clauseelement
    ret = self._execute_context(
          ^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1850, in _execute_context
    return self._exec_single_context(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1990, in _exec_single_context
    self._handle_dbapi_exception(
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 2357, in _handle_dbapi_exception
    raise sqlalchemy_exception.with_traceback(exc_info[2]) from e
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1971, in _exec_single_context
    self.dialect.do_execute(
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/default.py", line 919, in do_execute
    cursor.execute(statement, parameters)
sqlalchemy.exc.DatabaseError: (sqlite3.DatabaseError) database disk image is malformed
[SQL: UPDATE states SET old_state_id=? WHERE states.old_state_id IN (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, 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[parameters: (None, 4603904, 4603905, 4603906, 4603907, 4603908, 4603909, 4603910, 4603911, 4603912, 4603913, 4603914, 4603915, 4603916, 4603917, 4603918, 4603919, 4603920, 4603921, 4603922, 4603923, 4603924, 4603925, 4603926, 4603927, 4603928, 4603929, 4603930, 4603931, 4603932, 4603933, 4603934, 4603935, 4603936, 4603937, 4603938, 4603939, 4603940, 4603941, 4603942, 4603943, 4603944, 4603945, 4603946, 4603947, 4603948, 4603949, 4603950, 4603951, 4603952 ... 3901 parameters truncated ... 4603854, 4603855, 4603856, 4603857, 4603858, 4603859, 4603860, 4603861, 4603862, 4603863, 4603864, 4603865, 4603866, 4603867, 4603868, 4603869, 4603870, 4603871, 4603872, 4603873, 4603874, 4603875, 4603876, 4603877, 4603878, 4603879, 4603880, 4603881, 4603882, 4603883, 4603884, 4603885, 4603886, 4603887, 4603888, 4603889, 4603890, 4603891, 4603892, 4603893, 4603894, 4603895, 4603896, 4603897, 4603898, 4603899, 4603900, 4603901, 4603902, 4603903)]
(Background on this error at: https://sqlalche.me/e/20/4xp6)





2. Logger: homeassistant.components.recorder.core
Source: components/recorder/core.py:920
integration: Recorder (documentation, issues)
First occurred: 15:59:05 (1 occurrences)
Last logged: 15:59:05

Unrecoverable sqlite3 database corruption detected: (sqlite3.DatabaseError) database disk image is malformed [SQL: UPDATE states SET old_state_id=? 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?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)] [parameters: (None, 4603904, 4603905, 4603906, 4603907, 4603908, 4603909, 4603910, 4603911, 4603912, 4603913, 4603914, 4603915, 4603916, 4603917, 4603918, 4603919, 4603920, 4603921, 4603922, 4603923, 4603924, 4603925, 4603926, 4603927, 4603928, 4603929, 4603930, 4603931, 4603932, 4603933, 4603934, 4603935, 4603936, 4603937, 4603938, 4603939, 4603940, 4603941, 4603942, 4603943, 4603944, 4603945, 4603946, 4603947, 4603948, 4603949, 4603950, 4603951, 4603952 ... 3901 parameters truncated ... 4603854, 4603855, 4603856, 4603857, 4603858, 4603859, 4603860, 4603861, 4603862, 4603863, 4603864, 4603865, 4603866, 4603867, 4603868, 4603869, 4603870, 4603871, 4603872, 4603873, 4603874, 4603875, 4603876, 4603877, 4603878, 4603879, 4603880, 4603881, 4603882, 4603883, 4603884, 4603885, 4603886, 4603887, 4603888, 4603889, 4603890, 4603891, 4603892, 4603893, 4603894, 4603895, 4603896, 4603897, 4603898, 4603899, 4603900, 4603901, 4603902, 4603903)] (Background on this error at: https://sqlalche.me/e/20/4xp6)
Traceback (most recent call last):
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1971, in _exec_single_context
    self.dialect.do_execute(
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/default.py", line 919, in do_execute
    cursor.execute(statement, parameters)
sqlite3.DatabaseError: database disk image is malformed

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "/usr/src/homeassistant/homeassistant/components/recorder/core.py", line 920, in _process_one_task_or_event_or_recover
    return task.run(self)
           ^^^^^^^^^^^^^^
  File "/usr/src/homeassistant/homeassistant/components/recorder/tasks.py", line 113, in run
    if purge.purge_old_data(
       ^^^^^^^^^^^^^^^^^^^^^
  File "/usr/src/homeassistant/homeassistant/components/recorder/util.py", line 645, in wrapper
    return job(instance, *args, **kwargs)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/src/homeassistant/homeassistant/components/recorder/purge.py", line 87, in purge_old_data
    has_more_to_purge |= _purge_states_and_attributes_ids(
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/src/homeassistant/homeassistant/components/recorder/purge.py", line 200, in _purge_states_and_attributes_ids
    _purge_state_ids(instance, session, state_ids)
  File "/usr/src/homeassistant/homeassistant/components/recorder/purge.py", line 519, in _purge_state_ids
    disconnected_rows = session.execute(disconnect_states_rows(state_ids))
                        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/session.py", line 2306, in execute
    return self._execute_internal(
           ^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/session.py", line 2191, in _execute_internal
    result: Result[Any] = compile_state_cls.orm_execute_statement(
                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/bulk_persistence.py", line 1617, in orm_execute_statement
    return super().orm_execute_statement(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/orm/context.py", line 293, in orm_execute_statement
    result = conn.execute(
             ^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1422, in execute
    return meth(
           ^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/sql/lambdas.py", line 603, in _execute_on_connection
    return connection._execute_clauseelement(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1644, in _execute_clauseelement
    ret = self._execute_context(
          ^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1850, in _execute_context
    return self._exec_single_context(
           ^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1990, in _exec_single_context
    self._handle_dbapi_exception(
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 2357, in _handle_dbapi_exception
    raise sqlalchemy_exception.with_traceback(exc_info[2]) from e
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 1971, in _exec_single_context
    self.dialect.do_execute(
  File "/usr/local/lib/python3.12/site-packages/sqlalchemy/engine/default.py", line 919, in do_execute
    cursor.execute(statement, parameters)
sqlalchemy.exc.DatabaseError: (sqlite3.DatabaseError) database disk image is malformed
[SQL: UPDATE states SET old_state_id=? 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?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)]
[parameters: (None, 4603904, 4603905, 4603906, 4603907, 4603908, 4603909, 4603910, 4603911, 4603912, 4603913, 4603914, 4603915, 4603916, 4603917, 4603918, 4603919, 4603920, 4603921, 4603922, 4603923, 4603924, 4603925, 4603926, 4603927, 4603928, 4603929, 4603930, 4603931, 4603932, 4603933, 4603934, 4603935, 4603936, 4603937, 4603938, 4603939, 4603940, 4603941, 4603942, 4603943, 4603944, 4603945, 4603946, 4603947, 4603948, 4603949, 4603950, 4603951, 4603952 ... 3901 parameters truncated ... 4603854, 4603855, 4603856, 4603857, 4603858, 4603859, 4603860, 4603861, 4603862, 4603863, 4603864, 4603865, 4603866, 4603867, 4603868, 4603869, 4603870, 4603871, 4603872, 4603873, 4603874, 4603875, 4603876, 4603877, 4603878, 4603879, 4603880, 4603881, 4603882, 4603883, 4603884, 4603885, 4603886, 4603887, 4603888, 4603889, 4603890, 4603891, 4603892, 4603893, 4603894, 4603895, 4603896, 4603897, 4603898, 4603899, 4603900, 4603901, 4603902, 4603903)]
(Background on this error at: https://sqlalche.me/e/20/4xp6)

Additional information

I've found the database very unstable, this has happened a few times already, on different systems, including non-VM on raspberry and without manual trigger from my side.

[home-assistant]

Hey there @home-assistant/core, mind taking a look at this issue as it has been labeled with an integration (recorder) you are listed as a code owner for? Thanks!

Code owner commands

Code owners of recorder can trigger bot actions by commenting:

• @home-assistant close Closes the issue.
• @home-assistant rename Awesome new title Renames the issue.
• @home-assistant reopen Reopen the issue.
• @home-assistant unassign recorder Removes the current integration label and assignees on the issue, add the integration domain after the command.
• @home-assistant add-label needs-more-information Add a label (needs-more-information, problem in dependency, problem in custom component) to the issue.
• @home-assistant remove-label needs-more-information Remove a label (needs-more-information, problem in dependency, problem in custom component) on the issue.

_{^{(message by CodeOwnersMention)}}

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recorder documentation
recorder source
_{^{(message by IssueLinks)}}