.gitignore

*.o
*.gcno
*.gcda
*.class
*doxygen_xml
*_wrap.h
*_wrap.cxx
*.so
*.so.*
*.dylib
*.a
*_doxygen.i
.depend
.config
.cpuinfo
.cpuinfo.c
*.pyc
GPATH
GRTAGS
GTAGS
TAGS
tags
configure.log
*.swp
*.swo
*.mex*
*.oct
.localvimrc
*.DS_Store
cscope.*
cpplint.py

*~
\#*\#

*.orig


# /doc/
/doc/Doxyfile_en
/doc/Doxyfile_cn
/doc/html
/doc/html_cn
/doc/pages/Configure.generated
/doc/pages*/Examples*.mainpage

# /src/
/src/shogun/Makefile
/src/interfaces/*/Makefile
/src/examples
/src/shogun/.clang_complete
/src/configure-*-*.c*
/src/build-local

# modular interfaces
/src/interfaces/*_modular/*.doxy
/src/interfaces/*_modular/Evaluation.i
/src/interfaces/*_modular/Regression.i
/src/interfaces/*_modular/Library.i
/src/interfaces/*_modular/Distribution.i
/src/interfaces/*_modular/Structure.i
/src/interfaces/*_modular/Classifier.i
/src/interfaces/*_modular/Features.i
/src/interfaces/*_modular/Kernel.i
/src/interfaces/*_modular/Preprocessor.i
/src/interfaces/*_modular/Distance.i
/src/interfaces/*_modular/Clustering.i
/src/interfaces/*_modular/SGBase.i
/src/interfaces/*_modular/IO.i
/src/interfaces/*_modular/Mathematics.i
/src/interfaces/*_modular/ModelSelection.i
/src/interfaces/*_modular/modshogun.i
/src/interfaces/*_modular/modshogun_ignores.i
/src/interfaces/*_modular/*_includes.i
/src/interfaces/*_modular/Makefile
/src/interfaces/*_modular/Converter.i
/src/interfaces/*_modular/Multiclass.i
/src/interfaces/*_modular/Machine.i
/src/interfaces/*_modular/Transfer.i
/src/interfaces/*_modular/Loss.i
/src/interfaces/*_modular/Statistics.i
/src/interfaces/*_modular/Latent.i
/src/interfaces/*_modular/GaussianProcess.i

# particular modular ones
/src/interfaces/csharp_modular/*.cs
/src/interfaces/csharp_modular/abstract_types_extension.i
/src/interfaces/csharp_modular/modshogun.dll
/src/interfaces/java_modular/*.java
/src/interfaces/java_modular/*.jar
/src/interfaces/java_modular/*.class
/src/interfaces/java_modular/org/*
/src/interfaces/java_modular/shogun/*
/src/interfaces/python_modular/*.py
/src/interfaces/python_modular/abstract_types_extension.i
/src/interfaces/r_modular/*.R
/src/interfaces/r_modular/*.RData
/src/interfaces/perl_modular/*.pm
/src/interfaces/octave_modular/abstract_types_extension.i
/.duped_py_pl.pb

# /examples/
*.log
*.exe
/examples/documented
/examples/missing.log
/examples/undocumented/libshogun/*
!/examples/undocumented/libshogun/*.cpp
!/examples/undocumented/libshogun/CMakeLists.txt
!/examples/undocumented/libshogun/tools/
!examples/undocumented/python_modular/graphical/
!examples/undocumented/python_modular/*.py
!examples/undocumented/python_modular/CMakeLists.txt

# /tests
/tests/unit/shogun-unit-test
/tests/unit/*.txt
/tests/unit/*.xml
/tests/unit/*.hdf5
/tests/unit/*.json
/tests/unit/combined_kernel.weights
Testing/
examples/undocumented/python_modular/serialized_svm.bz2
examples/undocumented/python_modular/tmp/blaah.asc
examples/undocumented/python_modular/tmp/blaah.h5
examples/undocumented/python_modular/tmp/blaah.json
examples/undocumented/python_modular/tmp/blaah.xml
examples/undocumented/python_modular/vw_cache.dat.cache

# cmake
/CMakeFiles/
CMakeCache.txt
/build*
/third_party

# protobuf
src/shogun/io/protobuf/*.pb.*

# ipython notebook
.ipynb_checkpoints/

# CMake files
CMakeCache.txt
CMakeFiles
CMakeScripts
Makefile
build*/
cmake_install.cmake
install_manifest.txt

# Compiled Object files
*.slo
*.lo
*.o
*.obj

# Precompiled Headers
*.gch
*.pch

# Fortran module files
*.mod

# Compiled Static libraries
*.lai
*.la
*.a
*.lib

# Object files
*.o
*.ko
*.obj
*.elf

# Shared objects (inc. Windows DLLs)
*.dll
*.so
*.so.*
*.dylib

# Executables
*.exe
*.out
*.app
*.i*86
*.x86_64
*.hex

# Debug files
*.dSYM/

# Emacs
\#*\#
/.emacs.desktop
/.emacs.desktop.lock
*.elc
auto-save-list
tramp
.\#*

# Org-mode
.org-id-locations
*_archive

# flymake-mode
*_flymake.*

# eshell files
/eshell/history
/eshell/lastdir

# elpa packages
/elpa/

# reftex files
*.rel

# AUCTeX auto folder
/auto/

# cask packages
.cask/

# Flycheck
flycheck_*.el

# server auth directory
/server/

# Vim
[._]*.s[a-w][a-z]
[._]s[a-w][a-z]
Session.vim
.netrwhist
*~
tags

# Eclipse
.metadata
bin/
tmp/
*.tmp
*.bak
*.swp
*~.nib
local.properties
.settings/
.loadpath

# Eclipse Core
.project

# External tool builders
.externalToolBuilders/

# Locally stored "Eclipse launch configurations"
*.launch

# PyDev specific (Python IDE for Eclipse)
*.pydevproject

# CDT-specific (C/C++ Development Tooling)
.cproject

# JDT-specific (Eclipse Java Development Tools)
.classpath

# Java annotation processor (APT)
.factorypath

# PDT-specific (PHP Development Tools)
.buildpath

# sbteclipse plugin
.target

# Tern plugin
.tern-project

# TeXlipse plugin
.texlipse

# STS (Spring Tool Suite)
.springBeans

# Code Recommenders
.recommenders/

# temporary files which can be created if a process still has a handle open of a deleted file
.fuse_hidden*

# KDE directory preferences
.directory

# Linux trash folder which might appear on any partition or disk
.Trash-*

# OSX files
.DS_Store
.AppleDouble
.LSOverride

# Icon must end with two \r
Icon

# Thumbnails
._*

# Files that might appear in the root of a volume
.DocumentRevisions-V100
.fseventsd
.Spotlight-V100
.TemporaryItems
.Trashes
.VolumeIcon.icns

# Directories potentially created on remote AFP share
.AppleDB
.AppleDesktop
Network Trash Folder
Temporary Items
.apdisk

# Windows image file caches
Thumbs.db
ehthumbs.db

# Folder config file
Desktop.ini

# Recycle Bin used on file shares
$RECYCLE.BIN/

# Windows Installer files
*.cab
*.msi
*.msm
*.msp

# Windows shortcuts
*.lnk

# -*- mode: gitignore; -*-
# -*- coding: utf-8 -*-
# vim: set fileencoding=utf-8