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Add guide to visualisation from metrics #215

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mwalzer opened this issue Jan 20, 2023 · 4 comments
Open

Add guide to visualisation from metrics #215

mwalzer opened this issue Jan 20, 2023 · 4 comments
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@mwalzer
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mwalzer commented Jan 20, 2023

which values are in the metrics, best practices, code examples

@mwalzer
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mwalzer commented Jan 20, 2023

e.g. to value distribution terms, how to use the quantiles

@mwalzer
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mwalzer commented Jan 20, 2023

maybe general guide to metric terms with two sections:

  1. visualisation
  2. use/interpretation
  3. combination (mapping rules)
    For 2. when 'it depends...' e.g. the peak density indications for issues in different modes/scenarios: peakpick algo; fragmentation scheduling or ion collection; sample content, local reference/consistency; additional identification assessment

@mwalzer
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mwalzer commented Jan 20, 2023

For 3. default interpretations in case mapping term is missing? (Any relationship: has_value_concept STATO:0000036 ! outlier term should have a threshold definition term)

@bittremieux
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Rather than in the specification document, this can be part of the online documentation. This is more related to specific examples and providing guidance, rather than the technical specification.

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