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Hi!
I downloaded the repository, installed via install.py and tried to run the test.py benchmark.sh and visual benchmarks. Unfortunately none of them worked out of the box on my system. Running python 3.10 via miniconda on M1 mac.
test.py has a problem with numba's function caching:
Traceback (most recent call last):
File "/Users/nf/Python/umato/test.py", line 1, in <module>
import umato
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/__init__.py", line 1, in <module>
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/umato_.py", line 28, in <module>
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/sparse.py", line 10, in <module>
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/utils.py", line 698, in <module>
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/decorators.py", line 212, in wrapper
disp.enable_caching()
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/dispatcher.py", line 863, in enable_caching
self._cache = FunctionCache(self.py_func)
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/caching.py", line 601, in __init__
self._impl = self._impl_class(py_func)
File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/caching.py", line 337, in __init__
raise RuntimeError("cannot cache function %r: no locator available "
RuntimeError: cannot cache function 'rdist': no locator available for file '/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/utils.py
When running run-benchmark.sh, the whole script is running but complains about missing module specifications for all the methods and no results are shown:
/Users/nf/miniconda3/envs/umato/bin/python: Error while finding module specification for 'evaluation.models.umap' (ModuleNotFoundError: No module named 'evaluation')
When running the svelte app for visual benchmarking as instructed:
Error: Package subpath './compiler.js' is not defined by "exports" in /Users/nf/Python/umato/visualization/node_modules/svelte/package.json
Hi!
I downloaded the repository, installed via install.py and tried to run the test.py benchmark.sh and visual benchmarks. Unfortunately none of them worked out of the box on my system. Running python 3.10 via miniconda on M1 mac.
test.py has a problem with numba's function caching:
Traceback (most recent call last): File "/Users/nf/Python/umato/test.py", line 1, in <module> import umato File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/__init__.py", line 1, in <module> File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/umato_.py", line 28, in <module> File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/sparse.py", line 10, in <module> File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/utils.py", line 698, in <module> File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/decorators.py", line 212, in wrapper disp.enable_caching() File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/dispatcher.py", line 863, in enable_caching self._cache = FunctionCache(self.py_func) File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/caching.py", line 601, in __init__ self._impl = self._impl_class(py_func) File "/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/numba/core/caching.py", line 337, in __init__ raise RuntimeError("cannot cache function %r: no locator available " RuntimeError: cannot cache function 'rdist': no locator available for file '/Users/nf/miniconda3/envs/umato/lib/python3.10/site-packages/umato-0.0.4-py3.10.egg/umato/utils.pyWhen running run-benchmark.sh, the whole script is running but complains about missing module specifications for all the methods and no results are shown:
When running the svelte app for visual benchmarking as instructed:
Conda environment:
conda listThe text was updated successfully, but these errors were encountered: