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DESCRIPTION
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DESCRIPTION
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Package: EpiXprS
Title: Associates DNA Methylation with Matched gene Expression
Version: 0.99.4
Authors@R:
person(given = "Ian",
family = "Loveless",
role = c("aut", "cre"),
email = "ilovele1@hfhs.org")
Description: Method to impute gene expression from DNA methylation in cancer.
Imputed expression can be used to perform a mechanistic gene-based EWAS.
Functionality is also provided to associate DNA methylation with gene
expression in a multivariate environment on one's own data.
Depends: R (>= 4.1)
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
biocViews: DNAMethylation, Microarray, Software, GeneExpression,
GeneRegulation, Epigenetics, GenePrediction
Imports:
foreach,
doParallel,
survival,
glmnet,
stats,
Repitools,
utils,
stringr,
AnnotationHub,
ExperimentHub,
MultiAssayExperiment,
SummarizedExperiment
Suggests:
rmarkdown,
knitr,
markdown,
testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3