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repExplore .col="aa" and .col="nt" #51

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jmmontagne opened this issue May 8, 2020 · 1 comment
Open

repExplore .col="aa" and .col="nt" #51

jmmontagne opened this issue May 8, 2020 · 1 comment
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status:In progress ⏳ Work in progress tag:Methods Analysis and visualisation methods type:Bug Something isn't working

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@jmmontagne
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When using repExplore, I am unable to select the amino acid or nucleotide CDR3 columns- the output is always based on the "Sequence" column (total rows in the dataset).

So, for example, these three output the same number of clonotypes:
exp_vol <- repExplore(immdata$data, .method = "volume")
exp_vol <- repExplore(immdata$data, .method = "volume", .col = "nt")
exp_vol <- repExplore(immdata$data, .method = "volume", .col = "aa")

Thanks in advance for the assistance!

@vadimnazarov
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Hi @jmmontagne

Thank you, we will look into it!

@vadimnazarov vadimnazarov added status:In progress ⏳ Work in progress tag:IO Parsing or saving the data type:Bug Something isn't working tag:Methods Analysis and visualisation methods and removed tag:IO Parsing or saving the data labels May 10, 2020
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Labels
status:In progress ⏳ Work in progress tag:Methods Analysis and visualisation methods type:Bug Something isn't working
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