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I agree. I think that resolving the two referenced issues should also resolve this issue. The 2016.3 sub-group should discuss and decide what should be done.
There are two issues with the encoding test:
Encoding should allow gmx:Anchor too (besides gco:CharacterString): md-iop.a.3: Encoding should allow gmx:Anchor too ets-repository#127, and in general: take substitution groups into account in the XPaths
The guidance regarding encoding is actually unclear (GML vs. the actual application schema (or both maybe?); is specification required or not): Metadata ETS: md-iop.a.3 Encoding should not require specification ets-repository#30
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