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header-d3e9530.rst

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header

Implementation level
Type Status
CML extraction template image1
HTML5 representation image2
Template attributes
Attribute Value
source Amber log
id header
name Amber header
pattern \s*-{20,}.$\sAmber.$\s-{20,}.*
endPattern \s*\|\s*Run\son.*
endOffset 1
xml:base header.xml

Input

-------------------------------------------------------
Amber 18 PMEMD                              2018
-------------------------------------------------------
PMEMD implementation of SANDER, Release 18
Run on 02/11/2021 at 12:01:11

Output text

<comment class="example.output" id="header">   
        <module cmlx:templateRef="header">
           <scalar dataType="xsd:string" dictRef="cc:program">Amber</scalar>
           <scalar dataType="xsd:string" dictRef="cc:programVersion">18</scalar>
           <scalar dataType="xsd:date" dictRef="cc:runDate">2021-11-16T11:14:57.000</scalar>           
        </module>
    </comment>

Template definition

<record />
<record>\s*{A,cc:program}{A,cc:programVersion}.*</record>
<templateList>  <template id="rundate" pattern="\s*\|\s*Run\son.*" enPattern=".*" endPattern2="~">    <record>\s*\|\s*Run\son{X,cc:runDate}</record>
        </template>
    </templateList>
<transform process="createDate" xpath=".//cml:scalar[@dictRef='cc:runDate']" format="MM/dd/yyyy 'at' HH:mm:ss" />
<transform process="pullup" xpath=".//cml:scalar" repeat="2" />
<transform process="delete" xpath=".//cml:list[count(*)=0]" />
<transform process="delete" xpath=".//cml:list[count(*)=0]" />
<transform process="delete" xpath=".//cml:molecule[count(*)=0]" />