analysisargs.rst

Analysis Args Resource

Resource URL http://mytorrentserver/rundb/api/v1/analysisargs/
Schema URL http://mytorrentserver/rundb/api/v1/analysisargs/schema/

Resource Fields

field	help text	default	nullable	readonly	blank	unique	type
ionstatsargs	Unicode string data. Ex: "Hello World"		false	false	true	false	string
------------------------------chipType	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----false	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
creator	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
------------------------------thumbnailionstatsargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------thumbnailalignmentargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------thumbnailanalysisargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------samplePrepKitName	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------id	------------------------------------------------------------------------------Integer data. Ex: 2673		--------false	--------false	-----true	------true	--------integer
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
creationDate	A date & time as a string. Ex: "2010-11-10T03:07:43"	true	true	false	false	false	datetime
------------------------------sequenceKitName	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------analysisargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------thumbnailcalibrateargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
applGroup	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
chip_default	Boolean data. Ex: True	false	false	false	true	false	boolean
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
lastModifiedDate	A date & time as a string. Ex: "2010-11-10T03:07:43"	true	true	false	false	false	datetime
------------------------------beadfindargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------templateKitName	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------prebasecallerargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
description	Unicode string data. Ex: "Hello World"	n/a	true	false	false	true	string
------------------------------prethumbnailbasecallerargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
applType	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
------------------------------alignmentargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------thumbnailbasecallerargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
active	Boolean data. Ex: True	true	false	false	true	false	boolean
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
isSystem	Boolean data. Ex: True	false	false	false	true	false	boolean
------------------------------thumbnailbeadfindargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------calibrateargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------libraryKitName	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
name	Unicode string data. Ex: "Hello World"	n/a	false	false	false	true	string
------------------------------basecallerargs	------------------------------------------------------------------------------Unicode string data. Ex: "Hello World"		--------false	--------false	-----true	------false	--------string
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
lastModifiedUser	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
------------------------------	------------------------------------------------------------------------------	-------	--------	--------	-----	------	--------
resource_uri	Unicode string data. Ex: "Hello World"	n/a	false	true	false	false	string

Example Response

{
    "meta": {
        "previous": null, 
        "total_count": 116, 
        "offset": 0, 
        "limit": 1, 
        "next": "/rundb/api/v1/analysisargs/?offset=1&limit=1&format=json"
    }, 
    "objects": [
        {
            "ionstatsargs": "ionstats alignment", 
            "chipType": "314", 
            "creator": null, 
            "thumbnailionstatsargs": "", 
            "thumbnailalignmentargs": "", 
            "thumbnailanalysisargs": "", 
            "samplePrepKitName": "", 
            "id": 1, 
            "creationDate": "2017-04-10T04:56:23.000977+00:00", 
            "sequenceKitName": "", 
            "analysisargs": "Analysis --args-json /opt/ion/config/args_314_analysis.json", 
            "thumbnailcalibrateargs": "", 
            "applGroup": null, 
            "chip_default": true, 
            "lastModifiedDate": "2017-04-10T04:56:23.000977+00:00", 
            "beadfindargs": "justBeadFind --args-json /opt/ion/config/args_314_beadfind.json", 
            "templateKitName": "", 
            "prebasecallerargs": "BaseCaller --barcode-filter 0.01 --barcode-filter-minreads 20", 
            "description": "Ion 314 chip v2 analysis arguments", 
            "prethumbnailbasecallerargs": "", 
            "applType": null, 
            "alignmentargs": "tmap mapall ... stage1 map4", 
            "thumbnailbasecallerargs": "", 
            "active": true, 
            "isSystem": true, 
            "thumbnailbeadfindargs": "", 
            "calibrateargs": "Calibration", 
            "libraryKitName": "", 
            "name": "ion_default_314", 
            "basecallerargs": "BaseCaller --barcode-filter 0.01 --barcode-filter-minreads 20", 
            "lastModifiedUser": null, 
            "resource_uri": "/rundb/api/v1/analysisargs/1/"
        }
    ]
}

Allowed HTTP methods

• get
• post
• put
• delete
• patch