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ISB CGC Webapp
Shared code between repositories
Google Endpoints API Used to Drive CGC Webapp
Documentation for the ISB-CGC on Read the Docs.
OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared Meteor packages
code for uploading cancer data into GCS and BigQuery
Dockerfile for caMicroscope viewer. Includes Apache, PHP, IIPSrv and caMicroscope.
Digital pathology image viewer with support for human/machine generated annotations and markups.
Analysis examples based on the ISB-CGC hosted TCGA data, using Python and IPython Notebooks.
Proxy server to sit in front of VM that runs caMicroscope
Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.
This is a repository devoted to the user data processor.
Framework for running bioinformatic workflows and pipelines using the Google Pipelines API as the underlying task-runner.
Native Python SSHv2 protocol library
Feature Matrix ETL and UI on GCP
A reference implementation of the APIs defined in the schemas repository.