api.rst

.. automodule:: elpigraph

API

Import the package as:

import elpigraph

Principal graphs

.. autosummary::
   :toctree: .

   computeElasticPrincipalCurve
   computeElasticPrincipalCircle
   computeElasticPrincipalTree
   generateInitialConfiguration

Graph editing

.. autosummary::
   :toctree: .

   addPath
   delPath
   findPaths
   ExtendLeaves
   CollapseBranches
   ShiftBranching
   fineTuneBR

Utils

.. autosummary::
   :toctree: .

   utils.getProjection
   utils.getPseudotime
   utils.getWeights

Plotting

.. autosummary::
   :toctree: .

   plot.PlotPG