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<!DOCTYPE html>
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<h2 itemprop="name">Jinming Duan</h2>
<h3 itemprop="jobTitle">Lecturer in Computer Science</h3>
<h3 itemprop="worksFor" itemscope itemtype="http://schema.org/Organization">
<a href="https://www.birmingham.ac.uk/index.aspx" target="_blank" itemprop="url" rel="noopener">
<span itemprop="name">University of Birmingham</span>
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<p>Jinming is now a Lecturer within <a href="http://www.cs.bham.ac.uk">Computer Science</a> at University of Birmingham. He was a Research Associate jointly within <a href="https://biomedia.doc.ic.ac.uk">Department of Computing</a> & <a href="https://www.imperial.ac.uk/institute-clinical-sciences/research/imaging-sciences/">Institute of Clinical Sciences</a> at Imperial College London. There, he has been working closely with <a href="http://wp.doc.ic.ac.uk/dr/">Prof. Daniel Rueckert</a> and <a href="https://www.imperial.ac.uk/people/declan.oregan">Prof. Declan P O’Regan</a>, and developed cutting-edge machine learning methods for different cardiovascular imaging problems. Prior to that, he acquired his PhD degree in <a href="https://www.nottingham.ac.uk/computerscience/">Computer Science</a> at University of Nottingham under the supervision of <a href="http://www.cs.nott.ac.uk/~itzbl/index.html">Dr. Li Bai</a>. His PhD thesis entitled <a href="thesis/Thesis.pdf">Variational and PDE-based Methods for Image Processing</a>. He was funded by <a href="https://epsrc.ukri.org">EPSRC</a> over his PhD studies.</p>
<p>Jinming’s research includes deep neural nets, variational methods, partial/ordinary differential equations, numerical optimisation, and finite difference/element methods, with applications to image processing, computer vision and medical imaging analysis. His work has appeared across multiple application publications, including proceedings such as MICCAI, and journals such as Nature Machine Intelligence, IEEE Transactions on Medical Imaging, IEEE Transactions on Image Processing, Pattern Recognition, Physics in Medicine and Biology, Journal of Mathematical Imaging and Vision, Journal of Global Optimisation, etc. He regularly reviews 30+ reputable journals.</p>
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<blockquote>
<h3 id="i-am-currently-looking-for-outstanding-and-highly-motivated-phds-if-you-are-interested-please-contact-me"><strong>I am currently looking for outstanding and highly motivated PhDs. If you are interested please contact me.</strong></h3>
</blockquote>
<ul>
<li><p><strong>Mar 2019</strong> - I join University of Birmingham as Lecturer (i.e. assistant professor).</p></li>
<li><p><strong>Feb 2019</strong> - One <a href="https://www.nature.com/articles/s42256-019-0019-2">paper</a> is accepted to <a href="https://www.nature.com/natmachintell/">Nature Machine Intelligence</a>.</p></li>
<li><p><strong>Jan 2019</strong> - One <a href="https://ieeexplore.ieee.org/abstract/document/8624549">paper</a> is accepted to <a href="https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=42">IEEE TMI</a>.</p></li>
<li><p><strong>Dec 2018</strong> - I receive <a href="thesis/PhD.pdf">my PhD</a> from University of Nottingham.</p></li>
<li><p><strong>Nov 2018</strong> - One <a href="https://ieeexplore.ieee.org/abstract/document/8550655">paper</a> is accepted to <a href="https://ieeexplore.ieee.org/xpl/RecentIssue.jsp?punumber=83">IEEE TIP</a>.</p></li>
<li><p><strong>May 2018</strong> - Two papers are accepted to <a href="https://www.miccai2018.org/">MICCAI 2018</a>.</p></li>
<li><p><strong>Sep 2017</strong> - I join Imperial College London as Research Associate.</p></li>
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<h1>Selected Publications</h1>
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<div class="col-md-12">
<a href="https://j-duan.github.io/publication/survival-prediction/">
<img src="https://j-duan.github.io/img/model.png" class="pub-banner"
itemprop="image">
</a>
</div>
<div class="col-md-12">
<h3 class="article-title" itemprop="name">
<a href="https://j-duan.github.io/publication/survival-prediction/" itemprop="url">Deep-learning cardiac motion analysis for human survival prediction</a>
</h3>
<div class="pub-abstract" itemprop="text">
</div>
<div class="pub-authors" itemprop="author">
G Bello, T Dawes, J Duan, et al.
</div>
<div class="pub-publication">
Nature Machine Intelligence, 2019.
</div>
<div class="pub-links">
<a class="btn btn-primary btn-outline btn-xs" href="https://www.nature.com/articles/s42256-019-0019-2" target="_blank" rel="noopener">
PDF
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://github.com/UK-Digital-Heart-Project/4Dsurvival" target="_blank" rel="noopener">
Code
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Dataset
</a>
</div>
</div>
</div>
</div>
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<div class="row">
<div class="col-md-12">
<a href="https://j-duan.github.io/publication/mutli-task-learning/">
<img src="https://j-duan.github.io/img/network.png" class="pub-banner"
itemprop="image">
</a>
</div>
<div class="col-md-12">
<h3 class="article-title" itemprop="name">
<a href="https://j-duan.github.io/publication/mutli-task-learning/" itemprop="url">Automatic 3D bi-ventricular segmentation of cardiac images by a shape-refined multi-task deep learning approach</a>
</h3>
<div class="pub-abstract" itemprop="text">
</div>
<div class="pub-authors" itemprop="author">
J Duan, G Bello, J Schlemper, W Bai, et al.
</div>
<div class="pub-publication">
IEEE Transcation on Medical Imaging, 2019.
</div>
<div class="pub-links">
<a class="btn btn-primary btn-outline btn-xs" href="https://ieeexplore.ieee.org/abstract/document/8624549" target="_blank" rel="noopener">
PDF
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://github.com/UK-Digital-Heart-Project/4Dsegment" target="_blank" rel="noopener">
Code
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://drive.google.com/file/d/1EzP_Vapv71D1_B8x_S9N4fR6qT53UhHz/view?usp=sharing" target="_blank" rel="noopener">
Dataset
</a>
</div>
</div>
</div>
</div>
<div class="pub-list-item" itemscope itemtype="http://schema.org/CreativeWork">
<div class="row">
<div class="col-md-12">
<a href="https://j-duan.github.io/publication/convex-optimization/">
<img src="https://j-duan.github.io/img/ke.png" class="pub-banner"
itemprop="image">
</a>
</div>
<div class="col-md-12">
<h3 class="article-title" itemprop="name">
<a href="https://j-duan.github.io/publication/convex-optimization/" itemprop="url">Parameter-free selective segmentation with convex variational methods</a>
</h3>
<div class="pub-abstract" itemprop="text">
</div>
<div class="pub-authors" itemprop="author">
J Spencer, K Chen, J Duan
</div>
<div class="pub-publication">
IEEE Transactions on Image Processing, 2018.
</div>
<div class="pub-links">
<a class="btn btn-primary btn-outline btn-xs" href="https://ieeexplore.ieee.org/abstract/document/8550655" target="_blank" rel="noopener">
PDF
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Code
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Dataset
</a>
</div>
</div>
</div>
</div>
<div class="pub-list-item" itemscope itemtype="http://schema.org/CreativeWork">
<div class="row">
<div class="col-md-12">
<a href="https://j-duan.github.io/publication/oct-segmention/">
<img src="https://j-duan.github.io/img/3dmodels.png" class="pub-banner"
itemprop="image">
</a>
</div>
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<a href="https://j-duan.github.io/publication/oct-segmention/" itemprop="url">Automated segmentation of retinal layers from optical coherent tomography images using geodesic distance</a>
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J Duan, C Tench, I Gottlob, F Proudlock, L Bai
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Pattern Recognition, 2017.
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PDF
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<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Code
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Dataset
</a>
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<a href="https://j-duan.github.io/publication/diffusion-tensor-variational-reconstruction/" itemprop="url">Introducing diffusion tensor to high order variational model for image reconstruction</a>
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J Duan, W Ward, L Sibbett, Z Pan, L Bai
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Digital Signal Processing, 2017.
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<a class="btn btn-primary btn-outline btn-xs" href="https://doi.org/10.1016/j.dsp.2017.07.001" target="_blank" rel="noopener">
DOI
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<a href="https://j-duan.github.io/publication/malaria-detection-quantification/">
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<a href="https://j-duan.github.io/publication/malaria-detection-quantification/" itemprop="url">A portable image-based cytometer for rapid malaria detection and quantification</a>
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D Yang, G Subramanian, J Duan, S Gao, L Bai, R Chandramohanadas, Y Ai
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PloS ONE, 2017.
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PDF
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<a class="btn btn-primary btn-outline btn-xs" href="https://dx.doi.org/10.1002/2015WR017958" target="_blank" rel="noopener">
DOI
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</div>
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<a href="https://j-duan.github.io/publication/microglia-segmentation/">
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<h3 class="article-title" itemprop="name">
<a href="https://j-duan.github.io/publication/microglia-segmentation/" itemprop="url">Novel Methods for microglia segmentation, feature extraction and classification</a>
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<div class="pub-abstract" itemprop="text">
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<div class="pub-authors" itemprop="author">
Y Ding, M Pardon, A Agostini, H Faas, J Duan, W Ward, F Easton, D Auer, L Bai
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IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2016.
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<a class="btn btn-primary btn-outline btn-xs" href="https://doi.org/10.1109/TCBB.2016.2591520" target="_blank" rel="noopener">
DOI
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<a href="https://j-duan.github.io/publication/implement-higher-oder/" itemprop="url">Implementation of high order variational models made easy for image processing</a>
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<div class="pub-abstract" itemprop="text">
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<div class="pub-authors" itemprop="author">
W Lu, J Duan, Z Qiu, Z Pan, W Liu, L Bai
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Mathematical Methods in the Applied Sciences, 2016.
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PDF
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Code
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Dataset
</a>
</div>
</div>
</div>
</div>
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<div class="row">
<div class="col-md-12">
<a href="https://j-duan.github.io/publication/new-variational-image-decom/">
<img src="https://j-duan.github.io/img/octDeno.png" class="pub-banner"
itemprop="image">
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<a href="https://j-duan.github.io/publication/new-variational-image-decom/" itemprop="url">New variational image decomposition model for simultaneously denoising and segmenting optical coherence tomography images</a>
</h3>
<div class="pub-abstract" itemprop="text">
</div>
<div class="pub-authors" itemprop="author">
J Duan, C Tench, I Gottlob, F Proudlock, L Bai
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<div class="pub-publication">
Physics in Medicine & Biology, 2015.
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<a class="btn btn-primary btn-outline btn-xs" href="http://iopscience.iop.org/article/10.1088/0031-9155/60/22/8901/meta" target="_blank" rel="noopener">
PDF
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Code
</a>
<a class="btn btn-primary btn-outline btn-xs" href="https://j-duan.github.io/" target="_blank" rel="noopener">
Dataset
</a>