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Simulator of chemical reactions with external events


Idea: develop (in any programming language) a stochastic simulator of chemical reactions that takes as input:

  • A set of chemical reactions

  • An initial configuration (concentrations of molecules)

  • A list of events (changes in concentrations), each scheduled at a precise time

Simulation of the chemical reaction should be interrupted every time a scheduled event has to be executed. The state has to be updated in accordance with the event content. Then simulation can continue

The source code should be modular: it should be easy to add a new simulation algorithm


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