-
Notifications
You must be signed in to change notification settings - Fork 2
/
setup.py
54 lines (48 loc) · 1.65 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
# Copyright (C) 2023 Purvis Lab, CompCy Lab, University of North Carolina at Chapel Hill
import os
from setuptools import setup, find_packages
install_requires = [
"tensorflow>=2.7.0",
"tensorflow.keras>=2.6.0",
"phate>=1.0.7",
"scanpy>=1.9.1",
"scvelo>=0.2.4",
"pandas>=1.2.2",
"anndata>=0.8.0",
"numpy>=1.20.0",
"scipy>=1.6.1",
"scikit-learn",
"seaborn>=0.11.2"
"spektral"
]
version = '0.0.2'
readme = open("README.md").read()
setup(
name="cellograph",
version=version,
description="cellograph",
author="Jamshaid Shahir, Purvis Lab, University of North Carolina at Chapel Hill",
author_email="jashahir@live.unc.edu",
packages=find_packages(),
install_requires = install_requires,
license="MIT License - See LICENSE file",
python_requires=">=3.8",
long_description=readme,
long_description_content_type="text/markdown",
url="https://github.com/jashahir/cellograph",
keywords=["big-data", "manifold-learning", "computational-biology", "graph neural networks", "single-cell", "genomics"],
classifiers=[
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"Natural Language :: English",
"Operating System :: MacOS :: MacOS X",
"Operating System :: POSIX :: Linux",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Topic :: Scientific/Engineering :: Bio-Informatics",
],
)
# get location of setup.py
setup_dir = os.path.dirname(os.path.realpath(__file__))