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index.Rmd
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index.Rmd
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---
title: "Home"
output:
html_document:
toc: false
---
Website to share results of fucci-seq project.
## Image analysis
* [Processing images - from images to intensities](images-process.html)
* Image intensities
* [CONFESS preliminary results](confess-prelim.html)
* [QC analysis](images-qc.html)
* [QC anaysis follow-up using alternative metrics for signals](images-qc-followup.html)
* [Measurements variation by individual labels](images-qc-labels.html)
* [Compare different intensity metrics (background mean-adjusted vs median-adjusted)](images-metrics.html)
* Normalize intensities by batch
* [Quantile normalization](images-normalize-quantile.html)
* Image inspection
* [Inspect images with multiple nuclei](images-multiple-nuclei.html)
* [Inspect images with no nucleus](images-zero-nuclei.html)
## QC
* [Sequencing depth](totals.html)
* [Reads versus molecules](reads-v-molecules.html)