fix test error/logging

globalbioticinteractions · Feb 17, 2017 · 5c13729 · 5c13729
1 parent 114932f
commit 5c13729
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/eol-globi-data-sources/src/main/java/org/eol/globi/data/StudyImporterForBioInfo.java b/eol-globi-data-sources/src/main/java/org/eol/globi/data/StudyImporterForBioInfo.java
@@ -290,7 +290,7 @@ private Specimen createSpecimen(LabeledCSVParser parser, Study study, Map<String
             try {
                 Taxon taxon = taxonMap.get(bioTaxonId);
                 if (taxon == null) {
-                    getLogger().warn(study, "empty/no taxon name for  for bioinfo taxon id [" + bioTaxonId + "] on line [" + parser.lastLineNumber() + 1 + "]");
+                    getLogger().warn(study, "empty/no taxon name for bioinfo taxon id [" + bioTaxonId + "] on line [" + parser.lastLineNumber() + 1 + "]");
                 } else {
                     specimen = nodeFactory.createSpecimen(study, new TaxonImpl(taxon.getName(), TaxonomyProvider.BIO_INFO + "taxon:" + bioTaxonId));
                     setSpecimenExternalId(parser, specimen);

diff --git a/eol-globi-data-tool/src/test/java/org/eol/globi/data/StudyImporterForBioInfoTest.java b/eol-globi-data-tool/src/test/java/org/eol/globi/data/StudyImporterForBioInfoTest.java
@@ -108,7 +108,7 @@ public boolean shouldImportRecord(Long recordNumber) {
 
 
         assertThat("found unexpected log messages: [" + StringUtils.join(msgs, "\n") + "]", msgs.size(), is(1));
-        assertThat(msgs.get(0), is("no taxon for id [149359] on line [4171]"));
+        assertThat(msgs.get(0), is("empty/no taxon name for bioinfo taxon id [149359] on line [4171]"));
     }