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provide table with OBO RO biotic interaction terms #386

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jhpoelen opened this issue Nov 27, 2018 · 3 comments
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provide table with OBO RO biotic interaction terms #386

jhpoelen opened this issue Nov 27, 2018 · 3 comments

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@jhpoelen
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Using the http://obofoundry.org/ontology/ro.html to discover biotic interaction terms in OBO Relations ontology can be a bit intimidating by non-ontologists (including myself!).

Suggest to make a tabular list of biotic interaction terms currently supported.
@cmungall
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cmungall commented Dec 5, 2018

We could add this to the release process for RO, easy to do with a sparql query

@jhpoelen
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jhpoelen commented Dec 5, 2018

@cmungall that'd be excellent - let me know how I can help make this happen.

@jhpoelen jhpoelen mentioned this issue Dec 18, 2018
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jhpoelen pushed a commit to globalbioticinteractions/nomer that referenced this issue Dec 19, 2018
add example of ro tsv dump for species interactions. related to globa…
e5970ea 
…lbioticinteractions/globalbioticinteractions#386
@jhpoelen jhpoelen mentioned this issue Apr 5, 2019
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@jhpoelen
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A table of OBO RO terms can be found at:
https://github.com/globalbioticinteractions/nomer/blob/main/nomer/src/test/resources/org/globalbioticinteractions/nomer/match/ro.tsv

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@cmungall @jhpoelen