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API

Preprocessing

.. automodule:: scbean.tools.utils
   :members: read_sc_data,preprocessing,davae_preprocessing, spatial_preprocessing, spatial_rna_preprocessing
   :undoc-members:
   :show-inheritance:

Plotting

.. automodule:: scbean.tools.plotting
   :members: plotCorrelation
   :undoc-members:
   :show-inheritance:

DAVAE

.. automodule:: scbean.model.davae
   :members: fit_integration
   :undoc-members:
   :show-inheritance:

VIPCCA

.. autoclass:: scbean.model.vipcca.VIPCCA
   :members:
   :undoc-members:
   :show-inheritance:

VIMCCA

.. automodule:: scbean.model.vimcca
   :members: fit_integration
   :undoc-members:
   :show-inheritance:

VISGP

.. autoclass:: scbean.model.visgp.VISGP
   :members:
   :undoc-members:
   :show-inheritance: