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SVNHistory.txt
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------------------------------------------------------------------------
r272 | fangq | 2012-01-14 13:47:46 -0500 (Sat, 14 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
backward compatible with older CUDA nvcc
------------------------------------------------------------------------
r271 | fangq | 2012-01-11 18:45:13 -0500 (Wed, 11 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/mcxlab/examples/demo_4layer_head.m
M /mcextreme_cuda/trunk/src/mcx_shapes.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
fix a bug with -P option, fix a bug for mcxlab cfg.shapes
------------------------------------------------------------------------
r270 | fangq | 2012-01-11 14:22:43 -0500 (Wed, 11 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/TODO.txt
M /mcextreme_cuda/trunk/mcxlab/README.txt
add help for using JSON input and shape files
------------------------------------------------------------------------
r269 | fangq | 2012-01-10 18:46:11 -0500 (Tue, 10 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxlab/README.txt
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/mcxlab/mcxlab_atom.m
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_shapes.h
M /mcextreme_cuda/trunk/src/mcxlab.cpp
support shapes in MCXLAB
------------------------------------------------------------------------
r268 | fangq | 2012-01-10 18:45:43 -0500 (Tue, 10 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
experimental fix to boundary reflection accuracy issue in v0.5.2
------------------------------------------------------------------------
r267 | fangq | 2012-01-09 18:06:23 -0500 (Mon, 09 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/example/shapetest/jsonshape_allinone.json
M /mcextreme_cuda/trunk/example/shapetest/run_shapetest.sh
M /mcextreme_cuda/trunk/example/shapetest/shapes.json
M /mcextreme_cuda/trunk/src/mcx_shapes.c
M /mcextreme_cuda/trunk/src/mcx_shapes.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
support -P command to add shapes at runtime, separate Layers from Slabs commands
------------------------------------------------------------------------
r266 | fangq | 2012-01-08 23:21:10 -0500 (Sun, 08 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/TODO.txt
A /mcextreme_cuda/trunk/example/shapetest
A /mcextreme_cuda/trunk/example/shapetest/Makefile
A /mcextreme_cuda/trunk/example/shapetest/jsonshape.json
A /mcextreme_cuda/trunk/example/shapetest/jsonshape_allinone.json
A /mcextreme_cuda/trunk/example/shapetest/plotshapemask.m
A /mcextreme_cuda/trunk/example/shapetest/run_shapetest.sh
A /mcextreme_cuda/trunk/example/shapetest/shapes.json
M /mcextreme_cuda/trunk/src/Makefile
A /mcextreme_cuda/trunk/src/mcx_shapes.c
A /mcextreme_cuda/trunk/src/mcx_shapes.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
key feature: 3d shape definition and run-time rasterization
------------------------------------------------------------------------
r265 | fangq | 2012-01-07 10:41:35 -0500 (Sat, 07 Jan 2012) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/example/quicktest/qtest.json
A /mcextreme_cuda/trunk/src/cjson
A /mcextreme_cuda/trunk/src/cjson/README
A /mcextreme_cuda/trunk/src/cjson/cJSON.c
A /mcextreme_cuda/trunk/src/cjson/cJSON.h
A /mcextreme_cuda/trunk/src/cjson/test.c
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
fix -E -1 bug, add cjson lib and sample
------------------------------------------------------------------------
r264 | fangq | 2012-01-07 10:25:45 -0500 (Sat, 07 Jan 2012) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
support JSON format input file
------------------------------------------------------------------------
r263 | fangq | 2011-12-21 15:14:22 -0500 (Wed, 21 Dec 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/mcxlab/README.txt
M /mcextreme_cuda/trunk/src/mcx_utils.c
tag for a potential release
------------------------------------------------------------------------
r262 | fangq | 2011-12-21 14:41:21 -0500 (Wed, 21 Dec 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
fix to forward bias issue reported by Dave Giraud
------------------------------------------------------------------------
r258 | fangq | 2011-09-21 15:11:13 -0400 (Wed, 21 Sep 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
M /mcextreme_cuda/trunk/mcxlab/README.txt
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/mcxlab/mcxlab_atom.m
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
fix a regression in MCXLAB related to detectors, use exact exit position for radius test
------------------------------------------------------------------------
r257 | fangq | 2011-09-20 21:21:41 -0400 (Tue, 20 Sep 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/doc/FAQ.txt
update online docs for 0.5.2 release
------------------------------------------------------------------------
r256 | fangq | 2011-09-20 18:34:44 -0400 (Tue, 20 Sep 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
fix compilation issue on windows
------------------------------------------------------------------------
r255 | fangq | 2011-09-20 13:48:00 -0400 (Tue, 20 Sep 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
update document to release 0.5.2
------------------------------------------------------------------------
r254 | fangq | 2011-09-20 01:06:28 -0400 (Tue, 20 Sep 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
warning when timeout, warning when detector is off, accept srcfrom0 from inp file
------------------------------------------------------------------------
r253 | fangq | 2011-09-19 17:29:51 -0400 (Mon, 19 Sep 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/example/masktest/mtest.inp
M /mcextreme_cuda/trunk/example/masktest/plotresults.m
more tests with detmask, update plotting script
------------------------------------------------------------------------
r252 | fangq | 2011-09-19 13:31:31 -0400 (Mon, 19 Sep 2011) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/example/masktest
A /mcextreme_cuda/trunk/example/masktest/mtest.inp
A /mcextreme_cuda/trunk/example/masktest/plotresults.m
A /mcextreme_cuda/trunk/example/masktest/run_masktest.sh
M /mcextreme_cuda/trunk/src/mcx_utils.c
fixing a bug in calculating detector masks with float input
------------------------------------------------------------------------
r251 | fangq | 2011-08-09 22:32:49 -0400 (Tue, 09 Aug 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/example/bubble/bubble.inp
M /mcextreme_cuda/trunk/example/quicktest/grid2x.inp
M /mcextreme_cuda/trunk/example/quicktest/grid3x.inp
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
M /mcextreme_cuda/trunk/example/speedtest/benchcpeed.inp
M /mcextreme_cuda/trunk/example/sphbox/spherebox.inp
M /mcextreme_cuda/trunk/example/validation/validation.inp
M /mcextreme_cuda/trunk/example/validation/validation_b.inp
M /mcextreme_cuda/trunk/example/validation/validation_dark.inp
M /mcextreme_cuda/trunk/example/validation/validation_dark_b.inp
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/mcxlab/mcxlab_atom.m
M /mcextreme_cuda/trunk/src/mcx_utils.c
clarify the meaning and limitation of the voxel input in cfg file
------------------------------------------------------------------------
r250 | fangq | 2011-06-17 10:39:20 -0400 (Fri, 17 Jun 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
warn if users give an unreasonable incident vector
------------------------------------------------------------------------
r249 | fangq | 2011-06-11 17:39:09 -0400 (Sat, 11 Jun 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/mcxlab/INSTALL.txt
M /mcextreme_cuda/trunk/mcxlab/README.txt
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcxlab.cpp
post 0.5.1 polishing
------------------------------------------------------------------------
r248 | fangq | 2011-06-06 15:50:39 -0400 (Mon, 06 Jun 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/doc/FAQ.txt
A /mcextreme_cuda/trunk/example/sphbox/README.txt
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
ready to release v0.5.1
------------------------------------------------------------------------
r247 | fangq | 2011-05-03 23:50:55 -0400 (Tue, 03 May 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
record the true absorption before non-atomic loss for normalization
------------------------------------------------------------------------
r238 | fangq | 2011-04-26 18:55:54 -0400 (Tue, 26 Apr 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcxlab.cpp
change printed text string
------------------------------------------------------------------------
r237 | fangq | 2011-04-26 08:48:22 -0400 (Tue, 26 Apr 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
fix buffer length bug for cachebox mode
------------------------------------------------------------------------
r236 | fangq | 2011-04-26 08:47:17 -0400 (Tue, 26 Apr 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcxlab.cpp
allow crop0 crop1 input for the cachebox
------------------------------------------------------------------------
r235 | fangq | 2011-03-31 11:48:13 -0400 (Thu, 31 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxlab/README.txt
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/mcxlab/mcxlab_atom.m
correct help info for cfg.issrcfrom0
------------------------------------------------------------------------
r234 | fangq | 2011-03-25 19:33:50 -0400 (Fri, 25 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
tweak makefile for ocelot
------------------------------------------------------------------------
r233 | fangq | 2011-03-25 13:52:27 -0400 (Fri, 25 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
D /mcextreme_cuda/trunk/src/makefile_ocelot
new ocelot makefile, make BACKEND=ocelot
------------------------------------------------------------------------
r232 | fangq | 2011-03-25 13:29:14 -0400 (Fri, 25 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
A /mcextreme_cuda/trunk/mcxlab/mcxlab_atom.m
M /mcextreme_cuda/trunk/src/mcxlab.cpp
remove help text from mcxlab.cpp,add mcxlab_atom help file
------------------------------------------------------------------------
r230 | fangq | 2011-03-20 10:58:06 -0400 (Sun, 20 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
add mexbox option
------------------------------------------------------------------------
r229 | fangq | 2011-03-20 10:48:17 -0400 (Sun, 20 Mar 2011) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/mcxlab/INSTALL.txt
M /mcextreme_cuda/trunk/mcxlab/README.txt
M /mcextreme_cuda/trunk/mcxlab/examples/demo_mcxlab_basic.m
more polishing of mcxlab docs
------------------------------------------------------------------------
r228 | fangq | 2011-03-18 16:59:22 -0400 (Fri, 18 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.h
M /mcextreme_cuda/trunk/src/mcxlab.cpp
debugged and compiled on windows
------------------------------------------------------------------------
r227 | fangq | 2011-03-18 13:47:04 -0400 (Fri, 18 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/mcxlab/README.txt
D /mcextreme_cuda/trunk/mcxlab/init_mcxlab.m
minor update to the documents
------------------------------------------------------------------------
r226 | fangq | 2011-03-18 13:33:41 -0400 (Fri, 18 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/doc/FAQ.txt
M /mcextreme_cuda/trunk/doc/Get_Started.txt
M /mcextreme_cuda/trunk/doc/INSTALL.txt
M /mcextreme_cuda/trunk/mcxlab/README.txt
D /mcextreme_cuda/trunk/mcxlab/demo_mcxlab.m
A /mcextreme_cuda/trunk/mcxlab/examples/demo_mcxlab_basic.m (from /mcextreme_cuda/trunk/mcxlab/demo_mcxlab.m:222)
M /mcextreme_cuda/trunk/mcxlab/examples/demo_sphere_cube_subpixel.m
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
M /mcextreme_cuda/trunk/src/mcxlab.cpp
M /mcextreme_cuda/trunk/utils/cwdiffusion.m
M /mcextreme_cuda/trunk/utils/loadmc2.m
M /mcextreme_cuda/trunk/utils/normalizemcx.m
M /mcextreme_cuda/trunk/utils/tddiffusion.m
massive update of documentation
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r225 | fangq | 2011-03-18 10:38:50 -0400 (Fri, 18 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
M /mcextreme_cuda/trunk/src/mcxlab.cpp
exception handling in MCXLAB
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r224 | fangq | 2011-03-18 00:21:57 -0400 (Fri, 18 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxlab/examples/demo_4layer_head.m
M /mcextreme_cuda/trunk/mcxlab/examples/demo_sphere_cube_subpixel.m
A /mcextreme_cuda/trunk/mcxlab/examples/demo_validation_heterogeneous.m
A /mcextreme_cuda/trunk/mcxlab/examples/demo_validation_homogeneous.m
M /mcextreme_cuda/trunk/src/mcx_core.cu
mcxlab validation debugged and polished
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r223 | fangq | 2011-03-17 11:18:41 -0400 (Thu, 17 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcxlab.cpp
minor polishing of mcxlab and mcx_core
------------------------------------------------------------------------
r222 | fangq | 2011-03-16 19:17:57 -0400 (Wed, 16 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/AUTHORS.txt
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/TODO.txt
M /mcextreme_cuda/trunk/mcxlab/demo_mcxlab.m
A /mcextreme_cuda/trunk/mcxlab/examples
A /mcextreme_cuda/trunk/mcxlab/examples/demo_4layer_head.m
A /mcextreme_cuda/trunk/mcxlab/examples/demo_sphere_cube_subpixel.m
A /mcextreme_cuda/trunk/mcxlab/init_mcxlab.m
M /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
M /mcextreme_cuda/trunk/src/mcxlab.cpp
recode internal reflection, major improvement for mcxlab; new mcxlab samples
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r221 | fangq | 2011-03-15 17:45:01 -0400 (Tue, 15 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/doc/FAQ.txt
M /mcextreme_cuda/trunk/doc/Get_Started.txt
M /mcextreme_cuda/trunk/doc/INSTALL.txt
M /mcextreme_cuda/trunk/doc/gendoc.sh
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
extensive debugging with --unitinmm flag
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r220 | fangq | 2011-03-10 12:56:11 -0500 (Thu, 10 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
A /mcextreme_cuda/trunk/mcxlab
A /mcextreme_cuda/trunk/mcxlab/LICENSE.txt
A /mcextreme_cuda/trunk/mcxlab/README.txt
A /mcextreme_cuda/trunk/mcxlab/demo_mcxlab.m (from /mcextreme_cuda/trunk/utils/demo_mcxlab.m:217)
A /mcextreme_cuda/trunk/mcxlab/mcxlab.m
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcxlab.cpp
D /mcextreme_cuda/trunk/utils/demo_mcxlab.m
store MCXLAB in a top-level folder
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r219 | fangq | 2011-03-09 23:32:51 -0500 (Wed, 09 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcxlab.cpp
mcxlab works beautifully with detected photons
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r218 | fangq | 2011-03-09 19:38:44 -0500 (Wed, 09 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcxlab.cpp
update usage to support octave
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r217 | fangq | 2011-03-09 19:34:06 -0500 (Wed, 09 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
M /mcextreme_cuda/trunk/src/mcxlab.cpp
M /mcextreme_cuda/trunk/utils/demo_mcxlab.m
mcxlab support output parameters, add Octave support with make oct
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r216 | fangq | 2011-03-03 23:23:51 -0500 (Thu, 03 Mar 2011) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
use -E to set seed from command line
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r215 | fangq | 2010-12-28 17:37:44 -0500 (Tue, 28 Dec 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/example/validation/run_validation.sh
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/tictoc.c
use negative -R to enable cachebox defined in the input file, fix time wraping
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r214 | fangq | 2010-08-15 01:22:53 -0400 (Sun, 15 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
debug make mex option for Linux
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r213 | fangq | 2010-08-15 01:14:18 -0400 (Sun, 15 Aug 2010) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/example/sphbox/plotresults.m
M /mcextreme_cuda/trunk/example/sphbox/runspherebox.sh
A /mcextreme_cuda/trunk/example/sphbox/sphdiffsemiinf.mat
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
M /mcextreme_cuda/trunk/utils/demo_mcxlab.m
add make mex in the Makefile
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r212 | fangq | 2010-08-14 10:46:15 -0400 (Sat, 14 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
debugged with g++, fix const and unsigned warnings
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r211 | fangq | 2010-08-10 01:01:00 -0400 (Tue, 10 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mexmcx.m
A /mcextreme_cuda/trunk/utils/demo_mcxlab.m
add demo for mcxlab
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r210 | fangq | 2010-08-10 00:49:59 -0400 (Tue, 10 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
R /mcextreme_cuda/trunk/src/mexmcx.m
mcxlab succeeded in matlab, setting proper default values for cfg
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r209 | fangq | 2010-08-09 13:10:27 -0400 (Mon, 09 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcxlab.cpp
more debugging on mcxlab, not fully working yet
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r208 | fangq | 2010-08-09 01:12:51 -0400 (Mon, 09 Aug 2010) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/src/mexmcx.m
add mcxlab compilation script
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r207 | fangq | 2010-08-09 01:03:49 -0400 (Mon, 09 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_utils.c
A /mcextreme_cuda/trunk/src/mcxlab.cpp
initial addition of Matlab wrapper: mcxlab
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r206 | fangq | 2010-08-08 22:37:08 -0400 (Sun, 08 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
add -O3 in gcc flags
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r205 | fangq | 2010-08-08 18:37:46 -0400 (Sun, 08 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.lpi
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.rc
add unitinmm in the command line
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r204 | fangq | 2010-08-08 18:02:29 -0400 (Sun, 08 Aug 2010) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/example/quicktest/grid2x.inp
A /mcextreme_cuda/trunk/example/quicktest/grid3x.inp
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
A /mcextreme_cuda/trunk/example/quicktest/run_grid2x.sh
A /mcextreme_cuda/trunk/example/quicktest/run_grid3x.sh
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
debugged --unitinmm flag
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r203 | fangq | 2010-08-08 00:41:49 -0400 (Sun, 08 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
tested with sphbox example
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r202 | fangq | 2010-08-07 21:14:04 -0400 (Sat, 07 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
use -B flag for internal reflection
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r201 | fangq | 2010-08-05 23:18:08 -0400 (Thu, 05 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.lpi
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.rc
polishing text messages
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r200 | fangq | 2010-08-05 23:17:32 -0400 (Thu, 05 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
initial code supporting reflection at internal boundary, not tested
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r199 | fangq | 2010-08-02 23:28:17 -0400 (Mon, 02 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
estimate maxgate with autopilot mode
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r198 | fangq | 2010-08-02 21:50:07 -0400 (Mon, 02 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.lpi
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.rc
new GUI polishing, fixing mcxp saving bug
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r197 | fangq | 2010-08-02 16:48:27 -0400 (Mon, 02 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.lpi
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.rc
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/utils/loadmch.m
fix bugs when saving multiple blocks of mch, update loadmch, update GUI
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r196 | fangq | 2010-08-01 19:21:27 -0400 (Sun, 01 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/README.txt
minor touch to README file
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r194 | fangq | 2010-08-01 18:29:06 -0400 (Sun, 01 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/mcxstudio/mcxabout.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxabout.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.lpi
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.rc
update mcxstudio for v0.4.9
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r193 | fangq | 2010-08-01 08:34:43 -0400 (Sun, 01 Aug 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/TODO.txt
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
update documents for 0.4.9
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r192 | fangq | 2010-07-31 23:54:22 -0400 (Sat, 31 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
fix critical bug: pre-fermi hardware can not handle uchar in struct
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r191 | fangq | 2010-07-31 01:02:27 -0400 (Sat, 31 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
M /mcextreme_cuda/trunk/example/quicktest/run_qtest.sh
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
switch to total photon number, use autopilot mode
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r190 | fangq | 2010-07-30 11:32:55 -0400 (Fri, 30 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
report simulation speed, test media volume before use
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r189 | fangq | 2010-07-30 01:24:00 -0400 (Fri, 30 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
tag revision number for core units
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r188 | fangq | 2010-07-30 01:14:55 -0400 (Fri, 30 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
fix a bug when reading media with detector mask
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r187 | fangq | 2010-07-29 23:07:56 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.h
placeholder for MCX_CUDA_ARCH
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r186 | fangq | 2010-07-29 19:15:54 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
remove the unreferenced macro
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r185 | fangq | 2010-07-29 19:09:11 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/utils/loadmch.m
__CUDA_ARCH__ is only available in device kernels
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r184 | fangq | 2010-07-29 17:44:43 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/AUTHORS.txt
M /mcextreme_cuda/trunk/ChangeLog.txt
M /mcextreme_cuda/trunk/README.txt
M /mcextreme_cuda/trunk/TODO.txt
update changelog and documents
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r183 | fangq | 2010-07-29 17:18:32 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
minor typo correction
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r182 | fangq | 2010-07-29 17:09:53 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
compiled on windows with cuda 2.3
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r181 | fangq | 2010-07-29 13:24:00 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/utils/loadmch.m
print MCX compilation parameters, return struct for loadmch
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r180 | fangq | 2010-07-29 11:28:37 -0400 (Thu, 29 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
use atomic with shared memory cache to improve accuracy near the source
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r179 | fangq | 2010-07-28 15:47:30 -0400 (Wed, 28 Jul 2010) | 1 line
Changed paths:
A /mcextreme_cuda/trunk/example/sphbox
A /mcextreme_cuda/trunk/example/sphbox/createmcxbin.m
A /mcextreme_cuda/trunk/example/sphbox/runspherebox.sh
A /mcextreme_cuda/trunk/example/sphbox/spherebox.bin
A /mcextreme_cuda/trunk/example/sphbox/spherebox.inp
add example for validation of MCX in heterogeneous media
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r178 | fangq | 2010-07-28 15:47:07 -0400 (Wed, 28 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
use RNG to determine transmission or reflection, make det for saving detectors
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r177 | fangq | 2010-07-28 13:17:25 -0400 (Wed, 28 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/utils/loadmch.m
modularize photon saving at the detector
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r176 | fangq | 2010-07-28 11:20:45 -0400 (Wed, 28 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
M /mcextreme_cuda/trunk/utils/loadmch.m
use column major as the internal format, remove all index order tests
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r175 | fangq | 2010-07-27 19:08:54 -0400 (Tue, 27 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_const.h
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
A /mcextreme_cuda/trunk/utils/loadmch.m
support saving detected photons, but got 20% slower
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r174 | fangq | 2010-07-15 01:47:52 -0400 (Thu, 15 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/makefile_ocelot
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
users can use -u to specify voxel edge length in mm
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r173 | fangq | 2010-07-12 14:41:50 -0400 (Mon, 12 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
fixing a bug for indexing error for large volumes
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r172 | fangq | 2010-07-10 22:53:12 -0400 (Sat, 10 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_core.cu
tried to solve the multiple time gate initialization bug
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r171 | fangq | 2010-07-09 11:04:17 -0400 (Fri, 09 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
add flag -z to let src/det positions start from 0 instead of 1
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r170 | fangq | 2010-07-09 10:36:13 -0400 (Fri, 09 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
append data for multiple time gate groups
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r169 | fangq | 2010-07-01 15:35:10 -0400 (Thu, 01 Jul 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
standard benchmark to match my paper
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r168 | fangq | 2010-06-26 12:27:05 -0400 (Sat, 26 Jun 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/example/quicktest/qtest.inp
standard speed testing program
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r167 | fangq | 2010-06-26 12:15:09 -0400 (Sat, 26 Jun 2010) | 1 line
Changed paths:
M /mcextreme_cuda/trunk/src/mcextreme.c
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
use constant memory to pass kernel param, no speed improvement, add error line info
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r166 | fangq | 2010-06-26 10:12:20 -0400 (Sat, 26 Jun 2010) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
further improve readability by renaming variables
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r165 | fangq | 2010-06-26 01:44:44 -0400 (Sat, 26 Jun 2010) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
use meaningful struct in the kernel to improve readability
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r164 | fangq | 2010-06-26 01:43:48 -0400 (Sat, 26 Jun 2010) | 1 line
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M /mcextreme_cuda/trunk/src/logistic_rand.cu
M /mcextreme_cuda/trunk/src/mt_rand_s.cu
add more rand functions for internal reflection
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r163 | fangq | 2010-05-14 15:33:40 -0400 (Fri, 14 May 2010) | 1 line
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M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcextreme.c
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_core.h
M /mcextreme_cuda/trunk/src/mcx_utils.c
M /mcextreme_cuda/trunk/src/mcx_utils.h
allow to select which GPU to use with the -G option
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r162 | fangq | 2010-02-26 12:55:41 -0500 (Fri, 26 Feb 2010) | 1 line
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M /mcextreme_cuda/trunk/TODO.txt
updated changelog
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r161 | fangq | 2010-02-18 16:13:45 -0500 (Thu, 18 Feb 2010) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
replacing two conditions by clamping
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r160 | fangq | 2010-02-05 19:30:32 -0500 (Fri, 05 Feb 2010) | 1 line
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M /mcextreme_cuda/trunk/src/Makefile
M /mcextreme_cuda/trunk/src/mcx_core.cu
debug for snow-leopard
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r159 | fangq | 2010-02-04 15:32:06 -0500 (Thu, 04 Feb 2010) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
fixing NaN error detected by ocelot
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r158 | fangq | 2010-01-26 13:28:49 -0500 (Tue, 26 Jan 2010) | 1 line
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A /mcextreme_cuda/trunk/src/makefile_ocelot
add ocelot makefile for multicore CPU
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r156 | fangq | 2009-12-19 19:02:58 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/ChangeLog.txt
0.2 final changelog
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r155 | fangq | 2009-12-19 18:57:32 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
adjust keywords width once more
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r154 | fangq | 2009-12-19 18:55:53 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
adjust keywords width again
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r153 | fangq | 2009-12-19 18:52:31 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
adjust keywords width
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r152 | fangq | 2009-12-19 18:51:08 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
propset all keywords first, try again
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r151 | fangq | 2009-12-19 18:49:33 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
one more try to set svn keywords
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r150 | fangq | 2009-12-19 18:46:08 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
another attempt to set svn keywords
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r149 | fangq | 2009-12-19 18:39:52 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
update svn keywords
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r148 | fangq | 2009-12-19 18:33:33 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/src/mcx_core.cu
M /mcextreme_cuda/trunk/src/mcx_utils.c
add svn keywords
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r147 | fangq | 2009-12-19 18:16:12 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/doc/Download.txt
M /mcextreme_cuda/trunk/doc/FAQ.txt
M /mcextreme_cuda/trunk/doc/Get_Started.txt
M /mcextreme_cuda/trunk/doc/INSTALL.txt
M /mcextreme_cuda/trunk/doc/gendoc.sh
M /mcextreme_cuda/trunk/example/quicktest/README.txt
update documents, get ready for 0.2 final
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r146 | fangq | 2009-12-19 14:28:00 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.lpi
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.rc
adjust toolbutton enable disable status and add icon
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r145 | fangq | 2009-12-19 14:06:52 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/example/benchrng/Makefile
M /mcextreme_cuda/trunk/example/benchrng/rngspeed.cu
M /mcextreme_cuda/trunk/example/benchrng/runbench.sh
M /mcextreme_cuda/trunk/example/quicktest/run_qtest_silent.sh
M /mcextreme_cuda/trunk/example/speedtest/README.txt
M /mcextreme_cuda/trunk/example/speedtest/genreport.sh
test all examples
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r144 | fangq | 2009-12-19 11:33:05 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/src/Makefile
Makefile minor rewording
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r143 | fangq | 2009-12-19 11:23:14 -0500 (Sat, 19 Dec 2009) | 1 line
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M /mcextreme_cuda/trunk/mcxstudio/mcxabout.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxabout.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lfm
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.lrs
M /mcextreme_cuda/trunk/mcxstudio/mcxgui.pas
M /mcextreme_cuda/trunk/mcxstudio/mcxstudio.ico