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SIGSEGV #4

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elsbree opened this issue Sep 17, 2014 · 2 comments
Open

SIGSEGV #4

elsbree opened this issue Sep 17, 2014 · 2 comments

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@elsbree
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elsbree commented Sep 17, 2014

I'm attempting to use neo4j-embedded in the test suite for an application I'm developing, but I keep running into a Java error anytime I try to perform an action on the embedded server. I've inserted the Java log that is generated when the program crashes.

The only method I have called is the query() method. Do you know what might be causing the error?

The code that initializes the embedded instance is:

        embedded = require('neo4j-embedded');

        embedded.setVMOptions('-Xmx4096m');
        embedded.setDatabaseProperties({
            'org.neo4j.server.manage.console_engines': 'shell',
            'org.neo4j.server.webserver.port': '7575'
        });

        embedded.connect('graph.db', function(err, embeddedInstance) {

And the message that I get upon trying to perform an action:

#
# A fatal error has been detected by the Java Runtime Environment:
#
#  SIGSEGV (0xb) at pc=0x000000010426d3fd, pid=83181, tid=13571
#
# JRE version: Java(TM) SE Runtime Environment (7.0_67-b01) (build 1.7.0_67-b01)
# Java VM: Java HotSpot(TM) 64-Bit Server VM (24.65-b04 mixed mode bsd-amd64 compressed oops)
# Problematic frame:
# V  [libjvm.dylib+0x26d3fd]
#
# Core dump written. Default location: /cores/core or core.83181
#
# If you would like to submit a bug report, please visit:
#   http://bugreport.sun.com/bugreport/crash.jsp
#

---------------  T H R E A D  ---------------

Current thread (0x000000010383f000):  VMThread [stack: 0x0000000112349000,0x0000000112449000] [id=13571]

siginfo:si_signo=SIGSEGV: si_errno=0, si_code=1 (SEGV_MAPERR), si_addr=0x0000000000000000

Registers:
RAX=0x0000000000000000, RBX=0x0000000000000000, RCX=0x00000000000c83e0, RDX=0x00000001124489e8
RSP=0x0000000112448630, RBP=0x0000000112448630, RSI=0x00000001124489e8, RDI=0x00000001048152e0
R8 =0x000000005418e722, R9 =0x0000000100e030d8, R10=0x0000000000002000, R11=0x0000000011645928
R12=0x0000000000000008, R13=0x0000000004000000, R14=0x00000001048288e8, R15=0x0000000100b320e0
RIP=0x000000010426d3fd, EFLAGS=0x0000000000010206, ERR=0x0000000000000006
  TRAPNO=0x000000000000000e

Top of Stack: (sp=0x0000000112448630)
0x0000000112448630:   0000000112448af0 000000010445c6b6
0x0000000112448640:   0000000000000012 58000000012fd4d8
0x0000000112448650:   00000000037bc6d8 0000000100b322d0
0x0000000112448660:   00000000aaa80000 0000000100b33a80
0x0000000112448670:   0000000a00000000 0000000100b33570
0x0000000112448680:   0000000100b32540 0000000100b320e0
0x0000000112448690:   0000000100b325d0 0000000000000000
0x00000001124486a0:   0000000000000000 5800000000000000
0x00000001124486b0:   0000000000000000 0000000000000000
0x00000001124486c0:   0000000000000000 0000000000000000
0x00000001124486d0:   00000001124486f0 00000001041a5d1e
0x00000001124486e0:   00000001124487d8 0000000104aff5d9
0x00000001124486f0:   0000000112448720 000000010446ad8e
0x0000000112448700:   0000000112448a10 0000000112448a10
0x0000000112448710:   0000000112448800 0000000112448870
0x0000000112448720:   00000001124489f0 000000010446b854
0x0000000112448730:   0000000100e030d8 0000000100e03038
0x0000000112448740:   0000000100e03040 0000000100e03040
0x0000000112448750:   0000000112448a08 0000000112448a18
0x0000000112448760:   0000000104aff5e8 0000000104aff5e4
0x0000000112448770:   0000000104aff126 0000000104aff200
0x0000000112448780:   0000000104afefd0 0000000104aff5e3
0x0000000112448790:   000000000000000a 0000000112448790
0x00000001124487a0:   3b005ec710010001 0000000104aff200
0x00000001124487b0:   0000000104aff220 0000000104affd20
0x00000001124487c0:   0000000104aff220 0000000104affd20
0x00000001124487d0:   0000000104affdb0 0000000104800420
0x00000001124487e0:   0000000112448768 0000000104aff5d9
0x00000001124487f0:   0000000000000000 00007fff75176940
0x0000000112448800:   0000000104aff5da 0000000104aff122
0x0000000112448810:   0000000104aff200 0000000104afefd0
0x0000000112448820:   0000000104aff5d9 0000000000000005

Instructions: (pc=0x000000010426d3fd)
0x000000010426d3dd:   28 5d e9 90 ff ff ff 55 48 89 e5 48 83 c7 28 5d
0x000000010426d3ed:   e9 82 ff ff ff 55 48 89 e5 48 89 f2 48 8b 47 28
0x000000010426d3fd:   c7 00 00 00 00 00 c7 47 44 00 00 00 00 48 c7 47
0x000000010426d40d:   48 00 00 00 00 48 c7 47 50 00 00 00 00 48 c7 47

Register to memory mapping:

RAX=0x0000000000000000 is an unknown value
RBX=0x0000000000000000 is an unknown value
RCX=0x00000000000c83e0 is an unknown value
RDX=0x00000001124489e8 is an unknown value
RSP=0x0000000112448630 is an unknown value
RBP=0x0000000112448630 is an unknown value
RSI=0x00000001124489e8 is an unknown value
RDI=0x00000001048152e0: _ZN10PSScavenge9_gc_timerE+0 in /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/server/libjvm.dylib at 0x0000000104000000
R8 =0x000000005418e722 is an unknown value
R9 =0x0000000100e030d8 is an unknown value
R10=0x0000000000002000 is an unknown value
R11=0x0000000011645928 is an unknown value
R12=0x0000000000000008 is an unknown value
R13=0x0000000004000000 is an unknown value
R14=0x00000001048288e8: _ZN8Universe14_collectedHeapE+0 in /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/server/libjvm.dylib at 0x0000000104000000
R15=0x0000000100b320e0 is an unknown value


Stack: [0x0000000112349000,0x0000000112449000],  sp=0x0000000112448630,  free space=1021k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
V  [libjvm.dylib+0x26d3fd]
V  [libjvm.dylib+0x45c6b6]
V  [libjvm.dylib+0x459887]
V  [libjvm.dylib+0x52c13d]
V  [libjvm.dylib+0x532237]
V  [libjvm.dylib+0x53089b]
V  [libjvm.dylib+0x530ce8]
V  [libjvm.dylib+0x53060f]
V  [libjvm.dylib+0x420772]
C  [libsystem_pthread.dylib+0x1899]  _pthread_body+0x8a
C  [libsystem_pthread.dylib+0x172a]  _pthread_struct_init+0x0
C  [libsystem_pthread.dylib+0x5fc9]  thread_start+0xd

VM_Operation (0x0000000112ee55d8): ParallelGCSystemGC, mode: safepoint, requested by thread 0x0000000103012800


---------------  P R O C E S S  ---------------

Java Threads: ( => current thread )
  0x0000000103012800 JavaThread "Thread-0" [_thread_blocked, id=22275, stack(0x0000000112e67000,0x0000000112ee7000)]
  0x0000000103011800 JavaThread "Service Thread" daemon [_thread_blocked, id=21251, stack(0x0000000112a8e000,0x0000000112b8e000)]
  0x0000000103848800 JavaThread "C2 CompilerThread1" daemon [_thread_blocked, id=20739, stack(0x000000011298b000,0x0000000112a8b000)]
  0x0000000103847800 JavaThread "C2 CompilerThread0" daemon [_thread_blocked, id=20227, stack(0x0000000112888000,0x0000000112988000)]
  0x0000000102022800 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=19715, stack(0x0000000112785000,0x0000000112885000)]
  0x0000000103842800 JavaThread "Finalizer" daemon [_thread_blocked, id=14595, stack(0x000000011254f000,0x000000011264f000)]
  0x0000000103841800 JavaThread "Reference Handler" daemon [_thread_blocked, id=14083, stack(0x000000011244c000,0x000000011254c000)]
  0x00000001010c1000 JavaThread "main" [_thread_in_native, id=1287, stack(0x00007fff5fb80000,0x00007fff5fc00000)]

Other Threads:
=>0x000000010383f000 VMThread [stack: 0x0000000112349000,0x0000000112449000] [id=13571]
  0x0000000103013800 WatcherThread [stack: 0x0000000112b91000,0x0000000112c91000] [id=21763]

VM state:at safepoint (normal execution)

VM Mutex/Monitor currently owned by a thread:  ([mutex/lock_event])
[0x0000000100b2bdf0] Threads_lock - owner thread: 0x000000010383f000
[0x0000000100b2c2f0] Heap_lock - owner thread: 0x0000000103012800

Heap
 PSYoungGen      total 19456K, used 14853K [0x00000007aaa80000, 0x00000007ad080000, 0x0000000800000000)
  eden space 16896K, 72% used [0x00000007aaa80000,0x00000007ab682c48,0x00000007abb00000)
  from space 2560K, 99% used [0x00000007abd80000,0x00000007abffe978,0x00000007ac000000)
  to   space 2560K, 0% used [0x00000007abb00000,0x00000007abb00000,0x00000007abd80000)
 ParOldGen       total 43520K, used 38519K [0x0000000700000000, 0x0000000702a80000, 0x00000007aaa80000)
  object space 43520K, 88% used [0x0000000700000000,0x000000070259dc70,0x0000000702a80000)
 PSPermGen       total 21504K, used 13065K [0x00000006fae00000, 0x00000006fc300000, 0x0000000700000000)
  object space 21504K, 60% used [0x00000006fae00000,0x00000006fbac2458,0x00000006fc300000)

Card table byte_map: [0x0000000107a5f000,0x0000000108289000] byte_map_base: 0x0000000104288000

Polling page: 0x0000000100af9000

Code Cache  [0x0000000104a5f000, 0x0000000104ccf000, 0x0000000107a5f000)
 total_blobs=429 nmethods=114 adapters=269 free_code_cache=48449Kb largest_free_block=49591040

Compilation events (10 events):
Event: 1.243 Thread 0x0000000103847800 nmethod 110 0x0000000104b0ba90 code [0x0000000104b0bbc0, 0x0000000104b0bc58]
Event: 1.243 Thread 0x0000000103848800 nmethod 109 0x0000000104b0b650 code [0x0000000104b0b7a0, 0x0000000104b0b8d8]
Event: 1.268 Thread 0x0000000103847800  111             java.net.URL::getHost (5 bytes)
Event: 1.268 Thread 0x0000000103847800 nmethod 111 0x0000000104b0cd90 code [0x0000000104b0cec0, 0x0000000104b0cf38]
Event: 1.278 Thread 0x0000000103848800  112  s!         sun.misc.URLClassPath::getLoader (154 bytes)
Event: 1.282 Thread 0x0000000103847800  113             java.lang.String::endsWith (17 bytes)
Event: 1.284 Thread 0x0000000103847800 nmethod 113 0x0000000104b0c950 code [0x0000000104b0caa0, 0x0000000104b0cc58]
Event: 1.285 Thread 0x0000000103847800  114             java.net.URL::getProtocol (5 bytes)
Event: 1.285 Thread 0x0000000103847800 nmethod 114 0x0000000104b0c6d0 code [0x0000000104b0c800, 0x0000000104b0c878]
Event: 1.289 Thread 0x0000000103848800 nmethod 112 0x0000000104b07990 code [0x0000000104b07b80, 0x0000000104b089f0]

GC Heap History (4 events):
Event: 0.693 GC heap before
{Heap before GC invocations=1 (full 0):
 PSYoungGen      total 19456K, used 16896K [0x00000007aaa80000, 0x00000007ac000000, 0x0000000800000000)
  eden space 16896K, 100% used [0x00000007aaa80000,0x00000007abb00000,0x00000007abb00000)
  from space 2560K, 0% used [0x00000007abd80000,0x00000007abd80000,0x00000007ac000000)
  to   space 2560K, 0% used [0x00000007abb00000,0x00000007abb00000,0x00000007abd80000)
 ParOldGen       total 43520K, used 0K [0x0000000700000000, 0x0000000702a80000, 0x00000007aaa80000)
  object space 43520K, 0% used [0x0000000700000000,0x0000000700000000,0x0000000702a80000)
 PSPermGen       total 21504K, used 6589K [0x00000006fae00000, 0x00000006fc300000, 0x0000000700000000)
  object space 21504K, 30% used [0x00000006fae00000,0x00000006fb46f650,0x00000006fc300000)
Event: 0.699 GC heap after
Heap after GC invocations=1 (full 0):
 PSYoungGen      total 19456K, used 2549K [0x00000007aaa80000, 0x00000007ac000000, 0x0000000800000000)
  eden space 16896K, 0% used [0x00000007aaa80000,0x00000007aaa80000,0x00000007abb00000)
  from space 2560K, 99% used [0x00000007abb00000,0x00000007abd7d4d8,0x00000007abd80000)
  to   space 2560K, 0% used [0x00000007abd80000,0x00000007abd80000,0x00000007ac000000)
 ParOldGen       total 43520K, used 344K [0x0000000700000000, 0x0000000702a80000, 0x00000007aaa80000)
  object space 43520K, 0% used [0x0000000700000000,0x0000000700056280,0x0000000702a80000)
 PSPermGen       total 21504K, used 6589K [0x00000006fae00000, 0x00000006fc300000, 0x0000000700000000)
  object space 21504K, 30% used [0x00000006fae00000,0x00000006fb46f650,0x00000006fc300000)
}
Event: 1.018 GC heap before
{Heap before GC invocations=2 (full 0):
 PSYoungGen      total 19456K, used 19445K [0x00000007aaa80000, 0x00000007ac000000, 0x0000000800000000)
  eden space 16896K, 100% used [0x00000007aaa80000,0x00000007abb00000,0x00000007abb00000)
  from space 2560K, 99% used [0x00000007abb00000,0x00000007abd7d4d8,0x00000007abd80000)
  to   space 2560K, 0% used [0x00000007abd80000,0x00000007abd80000,0x00000007ac000000)
 ParOldGen       total 43520K, used 37628K [0x0000000700000000, 0x0000000702a80000, 0x00000007aaa80000)
  object space 43520K, 86% used [0x0000000700000000,0x00000007024bf200,0x0000000702a80000)
 PSPermGen       total 21504K, used 10176K [0x00000006fae00000, 0x00000006fc300000, 0x0000000700000000)
  object space 21504K, 47% used [0x00000006fae00000,0x00000006fb7f00a8,0x00000006fc300000)
Event: 1.022 GC heap after
Heap after GC invocations=2 (full 0):
 PSYoungGen      total 19456K, used 2554K [0x00000007aaa80000, 0x00000007ad080000, 0x0000000800000000)
  eden space 16896K, 0% used [0x00000007aaa80000,0x00000007aaa80000,0x00000007abb00000)
  from space 2560K, 99% used [0x00000007abd80000,0x00000007abffe978,0x00000007ac000000)
  to   space 2560K, 0% used [0x00000007abb00000,0x00000007abb00000,0x00000007abd80000)
 ParOldGen       total 43520K, used 38519K [0x0000000700000000, 0x0000000702a80000, 0x00000007aaa80000)
  object space 43520K, 88% used [0x0000000700000000,0x000000070259dc70,0x0000000702a80000)
 PSPermGen       total 21504K, used 10176K [0x00000006fae00000, 0x00000006fc300000, 0x0000000700000000)
  object space 21504K, 47% used [0x00000006fae00000,0x00000006fb7f00a8,0x00000006fc300000)
}

Deoptimization events (6 events):
Event: 0.284 Thread 0x0000000103012800 Uncommon trap: reason=null_check action=make_not_entrant pc=0x0000000104ac3424 method=java.lang.String.equals(Ljava/lang/Object;)Z @ 8
Event: 1.097 Thread 0x0000000103012800 Uncommon trap: reason=null_check action=make_not_entrant pc=0x0000000104af6afc method=java.util.jar.Attributes.putValue(Ljava/lang/String;Ljava/lang/String;)Ljava/lang/String; @ 13
Event: 1.109 Thread 0x0000000103012800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000104ad0e38 method=java.util.Properties$LineReader.readLine()I @ 62
Event: 1.109 Thread 0x0000000103012800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000104ad0e38 method=java.util.Properties$LineReader.readLine()I @ 62
Event: 1.110 Thread 0x0000000103012800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000104ad1a44 method=java.lang.String.equals(Ljava/lang/Object;)Z @ 8
Event: 1.110 Thread 0x0000000103012800 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000104ad1a44 method=java.lang.String.equals(Ljava/lang/Object;)Z @ 8

Internal exceptions (10 events):
Event: 1.293 Thread 0x0000000103012800 Threw 0x00000007ab60d1a0 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.294 Thread 0x0000000103012800 Threw 0x00000007ab615d30 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.294 Thread 0x0000000103012800 Threw 0x00000007ab61d7c8 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.295 Thread 0x0000000103012800 Threw 0x00000007ab62bd70 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.295 Thread 0x0000000103012800 Threw 0x00000007ab632260 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.295 Thread 0x0000000103012800 Threw 0x00000007ab639900 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.295 Thread 0x0000000103012800 Threw 0x00000007ab640a50 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.296 Thread 0x0000000103012800 Threw 0x00000007ab647450 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.296 Thread 0x0000000103012800 Threw 0x00000007ab64df20 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244
Event: 1.298 Thread 0x0000000103012800 Threw 0x00000007ab65aea0 at /HUDSON/workspace/7u-2-build-macosx-x86_64/jdk7u67/1368/hotspot/src/share/vm/prims/jvm.cpp:1244

Events (10 events):
Event: 1.295 loading class 0x0000000100b75890 done
Event: 1.296 loading class 0x0000000100b757f0
Event: 1.296 loading class 0x0000000100b757f0 done
Event: 1.296 loading class 0x0000000100c2ba10
Event: 1.296 loading class 0x0000000100c2ba10 done
Event: 1.296 loading class 0x0000000100c371b0
Event: 1.296 loading class 0x0000000100c371b0 done
Event: 1.298 loading class 0x0000000100c49830
Event: 1.298 loading class 0x0000000100c49830 done
Event: 1.800 Executing VM operation: ParallelGCSystemGC


Dynamic libraries:
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x00000000042d4000  /usr/lib/libSystem.B.dylib
0x00000000042d4000  /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
0x00000000042d4000  /System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/ApplicationServices
0x00000000042d4000  /usr/lib/libstdc++.6.dylib
0x00000000042d4000  /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CommonPanels.framework/Versions/A/CommonPanels
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Help.framework/Versions/A/Help
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/OpenScripting.framework/Versions/A/OpenScripting
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x00000000042d4000  /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition
0x00000000042d4000  /usr/lib/libobjc.A.dylib
0x00000000042d4000  /System/Library/Frameworks/CoreText.framework/Versions/A/CoreText
0x00000000042d4000  /System/Library/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics
0x00000000042d4000  /System/Library/Frameworks/ImageIO.framework/Versions/A/ImageIO
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/PrintCore.framework/Versions/A/PrintCore
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD
0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/SpeechSynthesis.framework/Versions/A/SpeechSynthesis
0x00000000042d4000  /usr/lib/libz.1.dylib
0x00000000042d4000  /usr/lib/libbsm.0.dylib
0x00000000042d4000  /System/Library/Frameworks/IOKit.framework/Versions/A/IOKit
0x00000000042d4000  /System/Library/Frameworks/IOSurface.framework/Versions/A/IOSurface
0x00000000042d4000  /System/Library/Frameworks/Security.framework/Versions/A/Security
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
0x00000000042d4000  /usr/lib/libc++.1.dylib
0x00000000042d4000  /usr/lib/system/libcache.dylib
0x00000000042d4000  /usr/lib/system/libcommonCrypto.dylib
0x00000000042d4000  /usr/lib/system/libcompiler_rt.dylib
0x00000000042d4000  /usr/lib/system/libcopyfile.dylib
0x00000000042d4000  /usr/lib/system/libcorecrypto.dylib
0x00000000042d4000  /usr/lib/system/libdispatch.dylib
0x00000000042d4000  /usr/lib/system/libdyld.dylib
0x00000000042d4000  /usr/lib/system/libkeymgr.dylib
0x00000000042d4000  /usr/lib/system/liblaunch.dylib
0x00000000042d4000  /usr/lib/system/libmacho.dylib
0x00000000042d4000  /usr/lib/system/libquarantine.dylib
0x00000000042d4000  /usr/lib/system/libremovefile.dylib
0x00000000042d4000  /usr/lib/system/libsystem_asl.dylib
0x00000000042d4000  /usr/lib/system/libsystem_blocks.dylib
0x00000000042d4000  /usr/lib/system/libsystem_c.dylib
0x00000000042d4000  /usr/lib/system/libsystem_configuration.dylib
0x00000000042d4000  /usr/lib/system/libsystem_dnssd.dylib
0x00000000042d4000  /usr/lib/system/libsystem_info.dylib
0x00000000042d4000  /usr/lib/system/libsystem_kernel.dylib
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0x00000000042d4000  /usr/lib/system/libsystem_malloc.dylib
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0x00000000042d4000  /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/Metadata.framework/Versions/A/Metadata
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0x00000000042d4000  /System/Library/PrivateFrameworks/TCC.framework/Versions/A/TCC
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0x00000000042d4000  /System/Library/Frameworks/ServiceManagement.framework/Versions/A/ServiceManagement
0x00000000042d4000  /usr/lib/libxslt.1.dylib
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
0x00000000042d4000  /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
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0x00000000042d4000  /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libFontRegistry.dylib
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0x00000000042d4000  /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib
0x00000000042d4000  /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib
0x00000000042d4000  /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib
0x00000000042d4000  /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libJP2.dylib
0x00000000042d4000  /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libRadiance.dylib
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0x00000000042d4000  /System/Library/Frameworks/Kerberos.framework/Versions/A/Kerberos
0x00000000042d4000  /System/Library/Frameworks/GSS.framework/Versions/A/GSS
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0x00000000042d4000  /System/Library/PrivateFrameworks/TrustEvaluationAgent.framework/Versions/A/TrustEvaluationAgent
0x00000000042d4000  /usr/lib/libheimdal-asn1.dylib
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0x00000000042d4000  /System/Library/PrivateFrameworks/CommonAuth.framework/Versions/A/CommonAuth
0x00000000042d4000  /System/Library/Frameworks/SecurityFoundation.framework/Versions/A/SecurityFoundation
0x00000000042d4000  /System/Library/Frameworks/CoreAudio.framework/Versions/A/CoreAudio
0x00000000042d4000  /System/Library/Frameworks/AudioToolbox.framework/Versions/A/AudioToolbox
0x00000000042d4000  /System/Library/PrivateFrameworks/CoreUI.framework/Versions/A/CoreUI
0x00000000042d4000  /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore
0x00000000042d4000  /System/Library/PrivateFrameworks/DesktopServicesPriv.framework/Versions/A/DesktopServicesPriv
0x00000000042d4000  /System/Library/PrivateFrameworks/MultitouchSupport.framework/Versions/A/MultitouchSupport
0x00000000042d4000  /System/Library/PrivateFrameworks/GenerationalStorage.framework/Versions/A/GenerationalStorage
0x00000000042d4000  /System/Library/PrivateFrameworks/Bom.framework/Versions/A/Bom
0x00000000042d4000  /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x00000000042d4000  /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo
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0x0000000100fc3000  /Users/nelsbree/ToneDen/node_modules/neo4j-embedded/node_modules/java/build/Release/nodejavabridge_bindings.node
0x0000000104000000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/server/libjvm.dylib
0x0000000100fdc000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/libverify.dylib
0x0000000102983000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/libjava.dylib
0x0000000100fe9000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/libzip.dylib
0x0000000112651000  /System/Library/Frameworks/JavaVM.framework/Frameworks/JavaRuntimeSupport.framework/JavaRuntimeSupport
0x0000000112669000  /System/Library/Frameworks/JavaVM.framework/Versions/A/Frameworks/JavaNativeFoundation.framework/Versions/A/JavaNativeFoundation
0x0000000100ff2000  /System/Library/Frameworks/JavaVM.framework/Versions/A/JavaVM
0x00000000042d4000  /System/Library/Frameworks/Cocoa.framework/Versions/A/Cocoa
0x00000000042d4000  /System/Library/PrivateFrameworks/CoreSymbolication.framework/Versions/A/CoreSymbolication
0x00000000042d4000  /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
0x00000000042d4000  /System/Library/Frameworks/CoreData.framework/Versions/A/CoreData
0x00000000042d4000  /System/Library/PrivateFrameworks/RemoteViewServices.framework/Versions/A/RemoteViewServices
0x00000000042d4000  /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
0x00000000042d4000  /System/Library/PrivateFrameworks/PerformanceAnalysis.framework/Versions/A/PerformanceAnalysis
0x00000000042d4000  /System/Library/PrivateFrameworks/Backup.framework/Versions/A/Backup
0x00000000042d4000  /System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x00000000042d4000  /System/Library/PrivateFrameworks/DebugSymbols.framework/Versions/A/DebugSymbols
0x0000000102fec000  /System/Library/PrivateFrameworks/JavaLaunching.framework/Versions/A/JavaLaunching
0x00000001134eb000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/libnet.dylib
0x0000000113644000  /Users/nelsbree/ToneDen/app/node_modules/execSync/build/Release/shell.node
0x0000000113647000  /Users/nelsbree/ToneDen/app/node_modules/bucket-rename-dir/node_modules/bucket-list/node_modules/aws2js/node_modules/libxml-to-js/node_modules/libxmljs/build/Release/xmljs.node
0x000000011379c000  /Users/nelsbree/ToneDen/app/node_modules/bucket-rename-dir/node_modules/bucket-list/node_modules/xml-object-stream/node_modules/node-expat/build/Release/node_expat.node
0x00000000042d4000  /usr/lib/libexpat.1.dylib
0x00000001137a4000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/libnio.dylib
0x00000001137b3000  /Library/Java/JavaVirtualMachines/jdk1.7.0_67.jdk/Contents/Home/jre/lib/libmanagement.dylib

VM Arguments:
jvm_args: -Xmx4096m
java_command: <unknown>
Launcher Type: generic

Environment Variables:
PATH=/opt/local/bin:/opt/local/sbin:/Users/nelsbree/Password:/usr/local/bin:/Library/Frameworks/Python.framework/Versions/3.3/bin:/Users/nelsbree/.gem/ruby/1.8.7/bin:/Users/nelsbree/bin:/Users/nelsbree/bin/Sencha/Cmd/3.1.2.342:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/usr/local/git/bin:/usr/local/ncbi/blast/bin:/usr/local/ncbi/blast/bin
SHELL=/bin/bash
DISPLAY=/tmp/launch-olPmZ4/org.macosforge.xquartz:0

Signal Handlers:
SIGSEGV: [libjvm.dylib+0x52b6c9], sa_mask[0]=0xfffefeff, sa_flags=0x00000043
SIGBUS: [libjvm.dylib+0x52b6c9], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGFPE: [libjvm.dylib+0x41deaa], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGPIPE: [libjvm.dylib+0x41deaa], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGXFSZ: [libjvm.dylib+0x41deaa], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGILL: [libjvm.dylib+0x41deaa], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGUSR1: [node+0x12a7eb], sa_mask[0]=0xfffefeff, sa_flags=0x00000000
SIGUSR2: [libjvm.dylib+0x41d99c], sa_mask[0]=0x00000000, sa_flags=0x00000042
SIGHUP: [libjvm.dylib+0x41bc2d], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGINT: [node+0x12a7eb], sa_mask[0]=0xfffefeff, sa_flags=0x00000000
SIGTERM: [libjvm.dylib+0x41bc2d], sa_mask[0]=0xfffefeff, sa_flags=0x00000042
SIGQUIT: [libjvm.dylib+0x41bc2d], sa_mask[0]=0xfffefeff, sa_flags=0x00000042


---------------  S Y S T E M  ---------------

OS:Bsduname:Darwin 13.2.0 Darwin Kernel Version 13.2.0: Thu Apr 17 23:03:13 PDT 2014; root:xnu-2422.100.13~1/RELEASE_X86_64 x86_64
rlimit: STACK 8192k, CORE infinity, NPROC 709, NOFILE 10240, AS infinity
load average:2.13 1.67 1.52

CPU:total 4 (4 cores per cpu, 1 threads per core) family 6 model 42 stepping 7, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1, sse4.2, popcnt, avx, aes, tsc, tscinvbit

Memory: 4k page, physical 4194304k(1048576k free)

/proc/meminfo:


vm_info: Java HotSpot(TM) 64-Bit Server VM (24.65-b04) for bsd-amd64 JRE (1.7.0_67-b01), built on Jul 25 2014 08:51:51 by "java_re" with gcc 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.11.00)

time: Tue Sep 16 18:42:58 2014
elapsed time: 1 seconds
@joewhite86
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@elsbree Does the error also trigger, when you let the query method away?

@elsbree
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elsbree commented Sep 23, 2014

No, the error only occurs when I try to run a query.

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