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you are right, compiling TF from source will likely resolve the compatibility issue between TF and CUDA. Although the issue is closed, I'll post my configuration here in case it will be helpful to others.
In my case, I am using NVIDIA Geforce RTX 2080.
But RTX 2080 only supports CUDA 10.0 above.
tensorflow/tensorflow#22900
But the tensorflow v1.9.0, v1.10.0 that you used only supports CUDA 9.0.
https://www.tensorflow.org/install/source#tested_build_configurations
Would the replacement of GPU be the only option to train DH3D?
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