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why is there no resolution input in the distance_map computing(scipy.ndimage.distance_transform_edt)? #47

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SummerZ2020 opened this issue Dec 6, 2022 · 1 comment

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@SummerZ2020
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SummerZ2020 commented Dec 6, 2022

Hello,
Thanks for sharing the code. it helps me a lot. The paper (loss odyssey ) is also great for me to know more about loss in medical segmentation.
I have found that in your code, the resolution is not considered in distance_map computing. However, it is used herehttps://github.com/LIVIAETS/boundary-loss.
Why is the resolution not be used here? Looking forward to your reply. Thanks a lot.

@JunMa11
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JunMa11 commented Oct 16, 2023

Thanks for your interest.

We didn't use it because nnunet already resamples them into the same spacing during preprocessing.

@JunMa11 JunMa11 closed this as completed Oct 16, 2023
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