Local copies of the following datasets have been saved in /data directory for reproducibility.
| Dataset | Download Location | Date Downloaded |
|---|---|---|
| Sequence & DSSP secondary structure | https://cdn.rcsb.org/etl/kabschSander/ss_dis.txt.gz | 2018-09-26 |
| PISCES representative chains | http://dunbrack.fccc.edu/Guoli/culledpdb_hh/cullpdb_pc25_res3.0_R1.0_d180920_chains14051.gz | 2018-09-26 |
| ProtVec model | https://raw.githubusercontent.com/ehsanasgari/Deep-Proteomics/master/protVec_100d_3grams.csv | 2018-10-01 |
Note, the PISCES download links change during the weekly update, e.g., the link above doesn't work anymore.