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Dockerfile
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# Copyright (c) Jupyter Development Team.
# Distributed under the terms of the Modified BSD License.
ARG REGISTRY=docker.io
ARG OWNER=jupyter
ARG BASE_CONTAINER=$REGISTRY/$OWNER/minimal-notebook
FROM $BASE_CONTAINER
LABEL maintainer="Jupyter Project <jupyter@googlegroups.com>"
# Fix: https://github.com/hadolint/hadolint/wiki/DL4006
# Fix: https://github.com/koalaman/shellcheck/wiki/SC3014
SHELL ["/bin/bash", "-o", "pipefail", "-c"]
USER root
# R pre-requisites
RUN apt-get update --yes && \
apt-get install --yes --no-install-recommends \
fonts-dejavu \
unixodbc \
unixodbc-dev \
r-cran-rodbc \
gfortran \
gcc && \
apt-get clean && rm -rf /var/lib/apt/lists/*
USER ${NB_UID}
# R packages including IRKernel which gets installed globally.
# r-e1071: dependency of the caret R package
RUN mamba install --yes \
'r-base' \
'r-caret' \
'r-crayon' \
'r-devtools' \
'r-e1071' \
'r-forecast' \
'r-hexbin' \
'r-htmltools' \
'r-htmlwidgets' \
'r-irkernel' \
'r-nycflights13' \
'r-randomforest' \
'r-rcurl' \
'r-rmarkdown' \
'r-rodbc' \
'r-rsqlite' \
'r-shiny' \
'r-tidymodels' \
'r-tidyverse' \
'unixodbc' && \
mamba clean --all -f -y && \
fix-permissions "${CONDA_DIR}" && \
fix-permissions "/home/${NB_USER}"