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paths.txt
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paths.txt
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Rosetta Input/Output Paths (order essential)
path is first '/', './',or '../' to next whitespace, must end with '/'
INPUT PATHS:
pdb1 ./
pdb2 ./
alternate data files /path/to/rosetta_database/
fragments ./
structure dssp,ssa (dat,jones) ./
sequence fasta,dat,jones ./
constraints ./
starting structure ./
data files /path/to/rosetta_database/
OUTPUT PATHS: ./
movie ./
pdb path ./
score ./
status ./
user ./
FRAGMENTS: (use '*****' in place of pdb name and chain)
2 number of valid fragment files
3 frag file 1 size
aa*****03_05.200_v1_3 name
9 frag file 2 size
aa*****09_05.200_v1_3 name
-------------------------------------------------------------------------
CVS information:
$Revision: 1.3 $
$Date: 2005/06/08 15:47:40 $
$Author: leaverfa $
-------------------------------------------------------------------------