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Bio::CIPRES

Build Status Coverage Status CPAN version Kwalitee License: GPL v3

Bio::CIPRES is an interface to the CIPRES REST API for running phylogenetic analyses via the CIPRES service. Currently it provides general classes and methods for job submission and handling - determination of the correct parameters to submit is up to the user. Details of the available tools and parameters can be found on the CIPRES website:

CIPRES tool documentation

Examples of module usage can be found in the demo directory of this distribution.

INSTALLATION

To install this module, run the following commands:

perl Build.PL
./Build
./Build test
./Build install

SUPPORT AND DOCUMENTATION

After installing, you can find documentation for this module with the perldoc command.

perldoc Bio::CIPRES

LICENSE AND COPYRIGHT

Copyright (C) 2014-2018 Jeremy Volkening jdv@base2bio.com

This library is free software; you can redistribute it and/or modify it under the terms of the GNU Library General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.

This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

See the LICENSE file in the top-level directory of this distribution for the full license terms.

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Perl 5 interface to the CIPRES REST API

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