Genotyping and annotation

[josesovaz]

Hello jyhehir,

I have one question related to mobster vcfs (created with MobsterVCF).

Is it possible to genotype and/or annotate the resulted vcfs with any program? If so, could you give me some clues of how to do that?

Thank you in advance.

Regards,

Jose

[jyhehir]

Hi, generation of VCF's is currently available as a stand alone tool to be run after the main mobster.But currently does not provide genotypes, this is scheduled for the next release. To convert the mobster output file into vcf, you can use the jar file provided inresources/MobsterVCF/MobsterVCF-0.0.1-SNAPSHOT.jar Regards,Jayne On Friday, 31 May 2019, 4:00:41 pm GMT+2, josesovaz <notifications@github.com> wrote: Hello jyhehir, I have one question related to mobster vcfs (created with MobsterVCF). Is it possible to genotype and/or annotate the resulted vcfs with any program? If so, could you give me some clues of how to do that? Thank you in advance. Regards, Jose — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.