Pinned

1. VollSeg VollSeg Public

   Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Available via pip package vollseg.

   Python 29 5

2. NapaTrackMater NapaTrackMater Public

   Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.

   Python 16 4

3. vollseg-napari vollseg-napari Public

   Napari plugin for vollseg

   Python 12 1

4. vollseg-napari-mtrack vollseg-napari-mtrack Public

   HTML 2

5. vollseg-napari-trackmate vollseg-napari-trackmate Public

   Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library

   Jupyter Notebook

6. cookiecutter-kapoorlabs-napari-plugin cookiecutter-kapoorlabs-napari-plugin Public

   Cookiecutter template for generating KapoorLabs written Napari plugins.

   Python