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Change URLs to SuperElastix organization
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daferna authored and kaspermarstal committed Jun 20, 2017
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6 changes: 3 additions & 3 deletions Documentation/Sphinx/GettingStarted.rst
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Expand Up @@ -14,7 +14,7 @@ SimpleElastix can be compiled with the SuperBuild. The SuperBuild is a script th

::

$ git clone https://github.com/kaspermarstal/SimpleElastix
$ git clone https://github.com/SuperElastix/SimpleElastix
$ mkdir build
$ cd build
$ cmake ../SimpleElastix/SuperBuild
Expand Down Expand Up @@ -153,14 +153,14 @@ The following approach allows us to use a locally installed version of ITK and/o
- Configure CMake. Set the following CMake variables: BUILD_SHARED_LIBS=OFF, Module_ITKReview=ON, ITK_WRAP_*=OFF.
- Compile ITK. Make sure to note the build settings, e.g. Release x64.
4. Build elastix.
- Clone elastix from `github.com/kaspermarstal/elastix <https://github.com/kaspermarstal/elastix>`_.
- Clone elastix from `github.com/SuperElastix/elastix <https://github.com/SuperElastix/elastix>`_.
- Set ITK_DIR to the location of the ITK build directory
- Configure CMake. Set the following CMake variables: BUILD_EXECUTABLE=OFF, USE_KNNGraphAlphaMutualInformationMetric=OFF
- Set appropriate ELASTIX_IMAGE_2/3/4D_PIXELTYPES and any components that you might require.
- If you are developing your own elastix components, make sure they are properly registered by the elastix build system.
- Compile elastix. Make sure to configure the build settings exactly the same as ITK e.g. Release x64.
5. Build SimpleElastix.
- Clone SimpleElastix from `github.com/kaspermarstal/SimpleElastix <https://github.com/kaspermarstal/SimpleElastix>`_.
- Clone SimpleElastix from `github.com/SuperElastix/SimpleElastix <https://github.com/SuperElastix/SimpleElastix>`_.
- Configure CMake. Point ITK_DIR to the location of the ITK build directory and ELASTIX_DIR to the location of the elastix build directory, specifically the src/ directory in it.
- Build SimpleElastix. Make sure to configure the build settings exactly the same as ITK e.g. Release x64.

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