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ObjectOntologyMapperImpl.java
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ObjectOntologyMapperImpl.java
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/**
* Copyright (C) 2019 Czech Technical University in Prague
*
* This program is free software: you can redistribute it and/or modify it under
* the terms of the GNU General Public License as published by the Free Software
* Foundation, either version 3 of the License, or (at your option) any
* later version.
*
* This program is distributed in the hope that it will be useful, but WITHOUT
* ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
* FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
* details. You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
package cz.cvut.kbss.jopa.oom;
import cz.cvut.kbss.jopa.exceptions.StorageAccessException;
import cz.cvut.kbss.jopa.model.MetamodelImpl;
import cz.cvut.kbss.jopa.model.descriptors.Descriptor;
import cz.cvut.kbss.jopa.model.metamodel.Attribute;
import cz.cvut.kbss.jopa.model.metamodel.EntityType;
import cz.cvut.kbss.jopa.model.metamodel.EntityTypeImpl;
import cz.cvut.kbss.jopa.model.metamodel.FieldSpecification;
import cz.cvut.kbss.jopa.oom.exceptions.EntityDeconstructionException;
import cz.cvut.kbss.jopa.oom.exceptions.EntityReconstructionException;
import cz.cvut.kbss.jopa.oom.exceptions.UnpersistedChangeException;
import cz.cvut.kbss.jopa.sessions.CacheManager;
import cz.cvut.kbss.jopa.sessions.LoadingParameters;
import cz.cvut.kbss.jopa.sessions.UnitOfWorkImpl;
import cz.cvut.kbss.jopa.utils.Configuration;
import cz.cvut.kbss.jopa.utils.EntityPropertiesUtils;
import cz.cvut.kbss.ontodriver.Connection;
import cz.cvut.kbss.ontodriver.descriptor.*;
import cz.cvut.kbss.ontodriver.exception.OntoDriverException;
import cz.cvut.kbss.ontodriver.model.*;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import java.lang.reflect.Field;
import java.net.URI;
import java.util.Collection;
import java.util.List;
import java.util.Objects;
import java.util.Set;
public class ObjectOntologyMapperImpl implements ObjectOntologyMapper, EntityMappingHelper {
private static final Logger LOG = LoggerFactory.getLogger(ObjectOntologyMapperImpl.class);
private final UnitOfWorkImpl uow;
private final CacheManager cache;
private final Connection storageConnection;
private final MetamodelImpl metamodel;
private final AxiomDescriptorFactory descriptorFactory;
private final EntityConstructor entityBuilder;
private final EntityDeconstructor entityBreaker;
private final InstanceRegistry instanceRegistry;
private final PendingReferenceRegistry pendingReferences;
private final EntityInstanceLoader defaultInstanceLoader;
private final EntityInstanceLoader twoStepInstanceLoader;
public ObjectOntologyMapperImpl(UnitOfWorkImpl uow, Connection connection) {
this.uow = Objects.requireNonNull(uow);
this.cache = uow.getLiveObjectCache();
this.storageConnection = Objects.requireNonNull(connection);
this.metamodel = uow.getMetamodel();
this.descriptorFactory = new AxiomDescriptorFactory(uow.getConfiguration());
this.instanceRegistry = new InstanceRegistry();
this.pendingReferences = new PendingReferenceRegistry();
this.entityBuilder = new EntityConstructor(this);
this.entityBreaker = new EntityDeconstructor(this);
this.defaultInstanceLoader = DefaultInstanceLoader.builder().connection(storageConnection).metamodel(metamodel)
.descriptorFactory(descriptorFactory)
.entityBuilder(entityBuilder).cache(cache).build();
this.twoStepInstanceLoader = TwoStepInstanceLoader.builder().connection(storageConnection).metamodel(metamodel)
.descriptorFactory(descriptorFactory)
.entityBuilder(entityBuilder).cache(cache).build();
}
@Override
public <T> boolean containsEntity(Class<T> cls, URI identifier, Descriptor descriptor) {
assert cls != null;
assert identifier != null;
assert descriptor != null;
final EntityType<T> et = getEntityType(cls);
final NamedResource classUri = NamedResource.create(et.getIRI().toURI());
final Axiom<NamedResource> ax = new AxiomImpl<>(NamedResource.create(identifier),
Assertion.createClassAssertion(false), new Value<>(classUri));
try {
return storageConnection.contains(ax, descriptor.getContext());
} catch (OntoDriverException e) {
throw new StorageAccessException(e);
}
}
@Override
public <T> T loadEntity(LoadingParameters<T> loadingParameters) {
assert loadingParameters != null;
instanceRegistry.reset();
return loadEntityInternal(loadingParameters);
}
private <T> T loadEntityInternal(LoadingParameters<T> loadingParameters) {
final EntityTypeImpl<T> et = getEntityType(loadingParameters.getEntityType());
final T result;
if (et.hasSubtypes()) {
result = twoStepInstanceLoader.loadEntity(loadingParameters);
} else {
result = defaultInstanceLoader.loadEntity(loadingParameters);
}
if (result != null) {
cache.add(loadingParameters.getIdentifier(), result, loadingParameters.getDescriptor());
}
return result;
}
@Override
public <T> T loadReference(LoadingParameters<T> loadingParameters) {
assert loadingParameters != null;
final EntityTypeImpl<T> et = getEntityType(loadingParameters.getEntityType());
if (et.hasSubtypes()) {
return twoStepInstanceLoader.loadReference(loadingParameters);
} else {
return defaultInstanceLoader.loadReference(loadingParameters);
}
}
@Override
public <T> EntityTypeImpl<T> getEntityType(Class<T> cls) {
return metamodel.entity(cls);
}
@Override
public <T> void loadFieldValue(T entity, Field field, Descriptor descriptor) {
assert entity != null;
assert field != null;
assert descriptor != null;
LOG.trace("Lazily loading value of field {} of entity {}.", field, entity);
final EntityType<T> et = (EntityType<T>) getEntityType(entity.getClass());
final URI primaryKey = EntityPropertiesUtils.getIdentifier(entity, et);
final AxiomDescriptor axiomDescriptor = descriptorFactory.createForFieldLoading(primaryKey,
field, descriptor, et);
try {
final Collection<Axiom<?>> axioms = storageConnection.find(axiomDescriptor);
if (axioms.isEmpty()) {
return;
}
entityBuilder.setFieldValue(entity, field, axioms, et, descriptor);
} catch (OntoDriverException e) {
throw new StorageAccessException(e);
} catch (IllegalArgumentException | IllegalAccessException e) {
throw new EntityReconstructionException(e);
}
}
@Override
public <T> void persistEntity(URI identifier, T entity, Descriptor descriptor) {
assert entity != null;
assert descriptor != null;
@SuppressWarnings("unchecked") final EntityType<T> et = (EntityType<T>) getEntityType(entity.getClass());
try {
if (identifier == null) {
identifier = generateIdentifier(et);
assert identifier != null;
EntityPropertiesUtils.setIdentifier(identifier, entity, et);
}
entityBreaker.setReferenceSavingResolver(new ReferenceSavingResolver(this));
final AxiomValueGatherer axiomBuilder = entityBreaker.mapEntityToAxioms(identifier, entity, et, descriptor);
axiomBuilder.persist(storageConnection);
persistPendingReferences(entity, axiomBuilder.getSubjectIdentifier());
} catch (IllegalArgumentException e) {
throw new EntityDeconstructionException("Unable to deconstruct entity " + entity, e);
}
}
@Override
public URI generateIdentifier(EntityType<?> et) {
try {
return storageConnection.generateIdentifier(et.getIRI().toURI());
} catch (OntoDriverException e) {
throw new StorageAccessException(e);
}
}
private <T> void persistPendingReferences(T instance, NamedResource identifier) {
try {
final Set<PendingAssertion> pas = pendingReferences.removeAndGetPendingAssertionsWith(instance);
for (PendingAssertion pa : pas) {
final AxiomValueDescriptor desc = new AxiomValueDescriptor(pa.getOwner());
desc.addAssertionValue(pa.getAssertion(), new Value<>(identifier));
desc.setAssertionContext(pa.getAssertion(), pa.getContext());
storageConnection.persist(desc);
}
final Set<PendingReferenceRegistry.PendingListReference> pLists =
pendingReferences.removeAndGetPendingListReferencesWith(instance);
final EntityType<?> et = getEntityType(instance.getClass());
for (PendingReferenceRegistry.PendingListReference list : pLists) {
final ListValueDescriptor desc = list.getDescriptor();
ListPropertyStrategy.addItemsToDescriptor(desc, list.getValues(), et);
if (desc instanceof SimpleListValueDescriptor) {
// TODO This can be an update or a persist
storageConnection.lists().updateSimpleList((SimpleListValueDescriptor) desc);
} else {
storageConnection.lists().updateReferencedList((ReferencedListValueDescriptor) desc);
}
}
} catch (OntoDriverException e) {
throw new StorageAccessException(e);
}
}
@Override
public <T> T getEntityFromCacheOrOntology(Class<T> cls, URI identifier, Descriptor descriptor) {
final T orig = uow.getManagedOriginal(cls, identifier, descriptor);
if (orig != null) {
return orig;
}
if (cache.contains(cls, identifier, descriptor)) {
return cache.get(cls, identifier, descriptor);
} else if (instanceRegistry.containsInstance(identifier, descriptor.getContext())) {
// This prevents endless cycles in bidirectional relationships
return cls.cast(instanceRegistry.getInstance(identifier, descriptor.getContext()));
} else {
return loadEntityInternal(new LoadingParameters<>(cls, identifier, descriptor));
}
}
@Override
public <T> T getOriginalInstance(T clone) {
assert clone != null;
return (T) uow.getOriginal(clone);
}
boolean isManaged(Object instance) {
return uow.isObjectManaged(instance);
}
<T> void registerInstance(URI primaryKey, T instance, URI context) {
instanceRegistry.registerInstance(primaryKey, instance, context);
}
@Override
public void checkForUnpersistedChanges() {
if (pendingReferences.hasPendingResources()) {
throw new UnpersistedChangeException(
"The following instances were neither persisted nor marked as cascade for persist: "
+ pendingReferences.getPendingResources());
}
}
void registerPendingAssertion(NamedResource owner, Assertion assertion, Object object, URI context) {
pendingReferences.addPendingAssertion(owner, assertion, object, context);
}
void registerPendingListReference(Object item, ListValueDescriptor listDescriptor, List<?> values) {
pendingReferences.addPendingListReference(item, listDescriptor, values);
}
@Override
public <T> void removeEntity(URI identifier, Class<T> cls, Descriptor descriptor) {
final EntityType<T> et = getEntityType(cls);
final AxiomDescriptor axiomDescriptor = descriptorFactory.createForEntityLoading(
new LoadingParameters<>(cls, identifier, descriptor, true), et);
try {
storageConnection.remove(axiomDescriptor);
pendingReferences.removePendingReferences(axiomDescriptor.getSubject());
} catch (OntoDriverException e) {
throw new StorageAccessException("Exception caught when removing entity.", e);
}
}
@Override
public <T> void updateFieldValue(T entity, Field field, Descriptor entityDescriptor) {
@SuppressWarnings("unchecked") final EntityType<T> et = (EntityType<T>) getEntityType(entity.getClass());
final URI pkUri = EntityPropertiesUtils.getIdentifier(entity, et);
entityBreaker.setReferenceSavingResolver(new ReferenceSavingResolver(this));
// It is OK to do it like this, because if necessary, the mapping will re-register a pending assertion
removePendingAssertions(et, field, pkUri);
final AxiomValueGatherer axiomBuilder = entityBreaker.mapFieldToAxioms(pkUri, entity, field, et, entityDescriptor);
axiomBuilder.update(storageConnection);
}
private <T> void removePendingAssertions(EntityType<T> et, Field field, URI identifier) {
final FieldSpecification<? super T, ?> fs = et.getFieldSpecification(field.getName());
if (fs instanceof Attribute) {
final Attribute<?, ?> att = (Attribute<?, ?>) fs;
// We care only about object property assertions, others are never pending
final Assertion assertion = Assertion.createObjectPropertyAssertion(att.getIRI().toURI(), att.isInferred());
pendingReferences.removePendingReferences(NamedResource.create(identifier), assertion);
}
}
@Override
public Collection<Axiom<NamedResource>> loadSimpleList(SimpleListDescriptor listDescriptor) {
try {
return storageConnection.lists().loadSimpleList(listDescriptor);
} catch (OntoDriverException e) {
throw new StorageAccessException(e);
}
}
@Override
public Collection<Axiom<NamedResource>> loadReferencedList(ReferencedListDescriptor listDescriptor) {
try {
return storageConnection.lists().loadReferencedList(listDescriptor);
} catch (OntoDriverException e) {
throw new StorageAccessException(e);
}
}
@Override
public Configuration getConfiguration() {
return uow.getConfiguration();
}
}