[Bug] Unexpected IDE functionality when non compiled entry files change

[Peefy]

Enhancement

For example, https://github.com/kcl-lang/kcl-lang.io/tree/main/examples/gitops/config

When the file app.k changed, the hover features are not changed in the whole file.

This is because app.k has changed, but the compilation entry is main.k in kcl.yaml, which depends on app.k but app.k is cached by the AST module cache and app.k not recompiled.