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pyNGSQC

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pyNGSQC is a python re-write of many of the functions of the fastx tookit, seqtk, FastQC and other similar next-gen sequencing quality control tools

It is designed to be fast (and particularly, compatible with PyPy), memory efficient, and import-able into existing or new python programs or pipelines.

Installation

python setup.py install
python setup.py test

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A pure-python next-gen sequencing quality control library, and soon to be command line tool

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