ASURATDB

ASURATDB is a computational pipeline for collecting and reformatting databases for functional annotation of genes. The collected databases are stored in genes2bioterm/.

Vignettes

Below is a document for collecting and reformatting databases for functional annotation of genes.

• https://keita-iida.github.io/ASURATDB/

Installation

One can install ASURATDB by the following code:

devtools::install_github("keita-iida/ASURATDB", upgrade = "never")

License

GPL-3

Citation

K. Iida, J. Kondo, J. N. Wibisana, M. Inoue, M. Okada, ASURAT: functional annotation-driven unsupervised clustering of single-cell transcriptomes, Bioinformatics 38(18), 4330-4336 (2022). Link