Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

allow anndata to write uppercase keys #2

Merged
merged 3 commits into from Feb 2, 2022
Merged

allow anndata to write uppercase keys #2

merged 3 commits into from Feb 2, 2022

Conversation

kevinyamauchi
Copy link
Owner

@jhnnsrs discovered that we were forcing the table keys to be lower case. This is incompatible with AnnData, which expects the dense matrix key to be X (i.e., upper case). This PR provides a fix by allowing the keys to be upper case when writting the AnnData group.

@kevinyamauchi kevinyamauchi merged commit 08ccd87 into main Feb 2, 2022
@kevinyamauchi kevinyamauchi deleted the fix-case branch February 2, 2022 16:49
LucaMarconato pushed a commit that referenced this pull request Apr 30, 2022
* allow anndata to write uppercase keys

* add comments

* fix dtype
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant