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Kleborate-viz is a web app to visualise the output of Kleborate - a genotyping tool for Klebsiella pneumoniae and its related species complex.
This wiki explains how to use Kleborate-viz and how to install a local version on your own computer. You can access the live version of Kleborate-viz here.
If you use Kleborate-viz in your research please cite this preprint: Lam, MMC. et al. Genomic surveillance framework and global population structure for Klebsiella pneumoniae. bioRxiv (2020).
Kleborate-viz is under active development alongside other Klebsiella genomic analysis tools and projects.
Please get in touch via the GitHub issues tracker if you have any issues, questions or ideas.
For more on our lab, including other software, see http://holtlab.net