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Genotyped_Isolates_Lam2017.txt
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Genotyped_Isolates_Lam2017.txt
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Sample_Name dataset country year source sample_type sample infectionStatus strain lineage CG_name ST_Jul22 YBT CLB IRO IUC Ybt_insertion YbST ICEKp KpZM YBT_lineage CLB_lineage clbJ/K_fusion transposaseERR1015323 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780648 KpI n/a 10 - - - - NA NA NA NA NA NA NA NAERR1023802 Wyres et al. Australia 2013 human urine urine infection 1687085 KpI n/a 12 - - - - NA NA NA NA NA NA NA NAERR1008730 Wyres et al. Australia 2013 human urine urine infection 16703720 KpI n/a 13 ybt clb - - 3 239 ICEKp10 present 17 3 no noERR1015311 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780634 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR1015312 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780635 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NASRR5082451 Wyres et al. Australia 2013 human rectal swab intestinal carriage AH0027 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NASRR5082459 Wyres et al. Australia 2013 human BAL respiratory infection AUS3493 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR1023673 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852147 KpI CG17/20 17 ybt - - - 3 232 ICEKp11 present 15 NA NA NAERR1008678 Wyres et al. Australia 2013 human urine urine infection 16703552 KpI CG17/20 17 ybt - - - 1 6 ICEKp6 absent 5 NA NA NAERR1015291 Wyres et al. Australia 2014 human urine urine infection 16780611 KpI CG17/20 17 ybt - - - 3 68 ICEKp11 present 15 NA NA NAERR1023825 Wyres et al. Australia 2013 human wound wound infection 16870830 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR1008693 Wyres et al. Australia 2013 human blood blood_sterile infection 16703567 KpI CG17/20 20 ybt - - - 4 136 ICEKp5 ? 14 NA NA NAERR1015310 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780633 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR1023693 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852167 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR1023753 Wyres et al. Australia 2013 human urine urine infection 16870741 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR1023782 Wyres et al. Australia 2013 human urine urine infection 16870770 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR1023852 Wyres et al. Australia 2013 human urine urine infection 16870857 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR1035979 Wyres et al. Australia 2013 human urine urine infection 1687088 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR1008728 Wyres et al. Australia 2013 human urine urine infection 16703718 KpI CG17/20 20 ybt - - - 4 135 ICEKp5 absent 14 NA NA NAERR1023752 Wyres et al. Australia 2013 human urine urine infection 16870740 KpI CG17/20 20 ybt - - - 4 137 ICEKp5 absent 14 NA NA NAERR1008659 Wyres et al. Australia 2013 human wound wound infection 16703533 KpI CG17/20 22 - - - - NA NA NA NA NA NA NA NAERR1015301 Wyres et al. Australia 2013 human throat throat carriage 16780622 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NAERR1015341 Wyres et al. Australia unknown human unknown unknown unknown #N/A KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NASRR5082486 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0586 KpI CG25 25 - - - - NA NA NA NA NA NA NA NAERR1023749 Wyres et al. Australia 2013 human urine urine infection 16870735 KpI CG25 25 ybt - - - 4 63 ICEKp5 absent 6 NA NA NAERR1008687 Wyres et al. Australia 2013 human sputum respiratory infection 16703561 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1008757 Wyres et al. Australia 2014 human sputum respiratory infection 16703748 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1023766 Wyres et al. Australia 2013 human sputum respiratory infection 16870754 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1008661 Wyres et al. Australia 2013 human urine urine infection 16703535 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1023790 Wyres et al. Australia 2013 human urine urine infection 16870778 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1023834 Wyres et al. Australia 2013 human urine urine infection 16870839 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1008787 Wyres et al. Australia 2014 human wound wound infection 16703778 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1215608 Wyres et al. Australia 2013 human blood blood_sterile infection 1809031 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1215613 Wyres et al. Australia 2013 human urine urine infection 1809036 KpI CG27 27 - - - - NA NA NA NA NA NA NA NAERR1008681 Wyres et al. Australia 2013 human urine urine infection 16703555 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008724 Wyres et al. Australia 2013 human urine urine infection 16703714 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008738 Wyres et al. Australia 2014 human urine urine infection 16703728 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008714 Wyres et al. Australia 2013 human urine urine infection 1670373 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008740 Wyres et al. Australia 2014 human urine urine infection 16703731 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008747 Wyres et al. Australia 2014 human urine urine infection 16703738 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008715 Wyres et al. Australia 2013 human urine urine infection 1670374 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008766 Wyres et al. Australia 2014 human urine urine infection 16703757 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1008775 Wyres et al. Australia 2014 human urine urine infection 16703766 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1015287 Wyres et al. Australia 2014 human urine urine infection 1678067 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1023843 Wyres et al. Australia 2013 human urine urine infection 16870848 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1035991 Wyres et al. Australia 2013 human urine urine infection 16870886 KpI CG29 29 - - - - NA NA NA NA NA NA NA NASRR5082464 Wyres et al. Australia 2014 human urine urine infection KC0278 KpI CG29 29 - - - - NA NA NA NA NA NA NA NAERR1023722 Wyres et al. Australia 2014 human urine urine infection 1687078 KpI n/a 30 - - - - NA NA NA NA NA NA NA NAERR1023666 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852140 KpI CG34 34 ybt - - - 1 90 ICEKp4 absent 10 NA NA NASRR5082460 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0360 KpI CG34 34 ybt - - - 1 90 ICEKp4 absent 10 NA NA NAERR1008788 Wyres et al. Australia 2014 human urine urine infection 16703779 KpI CG34 34 - - - - NA NA NA NA NA NA NA NAERR1015281 Wyres et al. Australia 2014 human urine urine infection 1678061 KpI CG34 34 - - - - NA NA NA NA NA NA NA NAERR1008702 Wyres et al. Australia 2013 human blood blood_sterile infection 16703577 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR1015295 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780615 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR1023650 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852123 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR1023653 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852126 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR1023703 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852178 KpI CG35 35 ybt - - - 1 179 ICEKp3 absent 9 NA NA NAERR1023705 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852181 KpI CG35 35 ybt - - - 1 179 ICEKp3 absent 9 NA NA NAERR1023742 Wyres et al. Australia 2013 human tip unknown infection 16870728 KpI CG35 35 ybt - - - plasmid 38 plasmid absent 4 NA NA NAERR1023866 Wyres et al. Australia 2013 human urine urine infection 16870872 KpI CG35 35 ybt - - - 1 196 ICEKp3 absent 8 NA NA NAERR1023750 Wyres et al. Australia 2013 human wound wound infection 16870738 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR1023807 Wyres et al. Australia 2013 human wound wound infection 16870812 KpI CG35 35 ybt - - - 4 183 ICEKp3 absent 9 NA NA NAERR1023821 Wyres et al. Australia 2013 human urine urine infection 16870826 KpI CG36 36 - - - - NA NA NA NA NA NA NA NAERR1008675 Wyres et al. Australia 2013 human urine urine infection 16703549 KpI CG36 36 ybt - - - 4 214 ICEKp3 absent 9 NA NA NAERR1023644 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852117 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1023671 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852145 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1023695 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852170 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1008793 Wyres et al. Australia 2014 human sputum respiratory infection 16703785 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1023648 Wyres et al. Australia 2013 human throat throat carriage 16852121 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1023649 Wyres et al. Australia 2013 human throat throat carriage 16852122 KpI CG37 37 ybt - - - plasmid 34 plasmid absent 4 NA NA NAERR1008636 Wyres et al. Australia 2013 human urine urine infection 16703510 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1008732 Wyres et al. Australia 2013 human urine urine infection 16703722 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1008751 Wyres et al. Australia 2014 human urine urine infection 16703742 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1008780 Wyres et al. Australia 2014 human urine urine infection 16703771 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR1023775 Wyres et al. Australia 2013 human urine urine infection 16870763 KpI CG37 37 ybt - - - 1 121 ICEKp4 absent 10 NA NA NAERR1023792 Wyres et al. Australia 2013 human urine urine infection 16870780 KpI CG37 37 ybt - - - 1 121 ICEKp4 absent 10 NA NA NAERR1023814 Wyres et al. Australia 2013 human urine urine infection 16870819 KpI CG37 37 ybt - - - 4 275 ICEKp11 present 15 NA NA NAERR1023646 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852119 KpI n/a 39 - - - - NA NA NA NA NA NA NA NAERR1015315 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780638 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1015283 Wyres et al. Australia 2014 human sputum respiratory infection 1678063 KpI CG45 45 ybt - - - 1 80 ICEKp4 absent 10 NA NA NAERR1008684 Wyres et al. Australia 2013 human urine urine infection 16703558 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1008729 Wyres et al. Australia 2013 human urine urine infection 16703719 KpI CG45 45 ybt - - - 1 93 ICEKp4 absent 10 NA NA NAERR1023761 Wyres et al. Australia 2013 human urine urine infection 16870749 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1023812 Wyres et al. Australia 2013 human urine urine infection 16870817 KpI CG45 45 ybt - - - 1 93 ICEKp4 absent 10 NA NA NAERR1023838 Wyres et al. Australia 2013 human urine urine infection 16870843 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1035980 Wyres et al. Australia 2013 human urine urine infection 1687089 KpI n/a 54 - - - - NA NA NA NA NA NA NA NAERR1023771 Wyres et al. Australia 2013 human blood blood_sterile infection 16870759 KpI n/a 60 ybt - iro - 3 324 ICEKp1 absent 2 NA NA NAERR1023717 Wyres et al. Australia 2013 human wound wound infection 1687073 KpI CG66 66 ybt clb iro iuc 3 316 ICEKp10 present 12 1 no noERR1008783 Wyres et al. Australia 2014 human blood blood_sterile infection 16703774 KpI CG86 86 ybt - iro - 3 203 ICEKp3 absent 9 NA NA NAERR1023828 Wyres et al. Australia 2013 human sputum respiratory infection 16870833 KpI CG86 86 ybt - iro iuc 3 202 ICEKp3 absent 9 NA NA NAERR1023862 Wyres et al. Australia 2013 human urine urine infection 16870867 KpI CG86 86 ybt - iro iuc 4 183 ICEKp3 absent 9 NA NA NAERR1215614 Wyres et al. Australia 2013 human urine urine infection 1809037 KpI CG86 86 ybt - iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR1035983 Wyres et al. Australia 2013 human sputum respiratory infection 16870878 KpI CG90 91 ybt - - iuc 1 111 ? present 10 NA NA NAERR1008708 Wyres et al. Australia 2013 human sputum respiratory infection 16703583 KpI CG90 93 ybt - - iuc 4/3? 103 ICEKp4 absent 10 NA NA NAERR1008784 Wyres et al. Australia 2014 human urine urine infection 16703775 KpI CG152 105 - - - - NA NA NA NA NA NA NA NAERR1008637 Wyres et al. Australia 2013 human urine urine infection 16703511 KpI CG152 105 ybt - iro - 1 238 ICEKp11 absent 15 NA NA NAERR1023795 Wyres et al. Australia 2013 human tissue tissue infection 16870783 KpI n/a 110 - - - - NA NA NA NA NA NA NA NAERR1008633 Wyres et al. Australia 2013 human blood blood_sterile infection 1670357 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1008794 Wyres et al. Australia 2014 human blood blood_sterile infection 16703786 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1023816 Wyres et al. Australia 2013 human blood blood_sterile infection 16870821 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1023851 Wyres et al. Australia 2013 human blood blood_sterile infection 16870856 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1023656 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852130 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1023704 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852180 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1008703 Wyres et al. Australia 2013 human sputum respiratory infection 16703578 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1023817 Wyres et al. Australia 2013 human sputum respiratory infection 16870822 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR1008741 Wyres et al. Australia 2013 human urine urine infection 16703732 KpI CG111 111 ybt - - - 1 67 ICEKp7 absent 7 NA NA NAERR1023786 Wyres et al. Australia 2013 human blood blood_sterile infection 16870774 KpI n/a 113 - - - - NA NA NA NA NA NA NA NASRR5082475 Wyres et al. Australia 2013 human rectal swab intestinal carriage AH0148 KpI n/a 116 ybt - - - plasmid 64 plasmid absent 4 NA NA NAERR1023665 Wyres et al. Australia 2014 human throat throat carriage 16852139 KpI n/a 127 - - - - NA NA NA NA NA NA NA NAERR1015316 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780639 KpI n/a 128 - - - - NA NA NA NA NA NA NA NAERR1008631 Wyres et al. Australia 2013 human sputum respiratory infection 1670355 KpI CG133 133 - - - - NA NA NA NA NA NA NA NAERR1023738 Wyres et al. Australia 2013 human sputum respiratory infection 16870724 KpI CG133 133 ybt clb - - 3 267 ICEKp10 present 17 3 no noERR1023869 Wyres et al. Australia 2013 human urine urine infection 16870875 KpI n/a 134 - - - - NA NA NA NA NA NA NA NAERR1023669 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852143 KpI CG152 152 ybt - - - 4 91 ICEKp4 absent 10 NA NA NAERR1008707 Wyres et al. Australia 2013 human fluid fluid infection 16703582 KpI n/a 176 - - - - NA NA NA NA NA NA NA NAERR1023868 Wyres et al. Australia 2013 human urine urine infection 16870874 KpI n/a 180 ybt - - - 1 88 ICEKp4 absent 10 NA NA NAERR1023779 Wyres et al. Australia 2013 human urine urine infection 16870767 KpI n/a 182 ybt - - - 1 110 ICEKp4 absent 10 NA NA NAERR1008649 Wyres et al. Australia 2013 human urine urine infection 16703523 KpI n/a 185 - - - - NA NA NA NA NA NA NA NAERR1023831 Wyres et al. Australia 2013 human urine urine infection 16870836 KpI n/a 185 - - - - NA NA NA NA NA NA NA NAERR1023765 Wyres et al. Australia 2013 human urine urine infection 16870753 KpI n/a 200 - - - - NA NA NA NA NA NA NA NAERR1023645 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852118 KpIII n/a 205 - - - - NA NA NA NA NA NA NA NAERR1023689 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852163 KpI n/a 215 - - - - NA NA NA NA NA NA NA NAERR1023690 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852164 KpI n/a 215 - - - - NA NA NA NA NA NA NA NAERR1023760 Wyres et al. Australia 2013 human BAL respiratory infection 16870748 KpI n/a 215 ybt - - - 4 11 ICEKp6 absent 5 NA NA NAERR1008680 Wyres et al. Australia 2013 human urine urine infection 16703554 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR1023744 Wyres et al. Australia 2013 human urine urine infection 16870730 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR1023718 Wyres et al. Australia 2013 human urine urine infection 1687074 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR1023719 Wyres et al. Australia 2013 human urine urine infection 1687075 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR1008725 Wyres et al. Australia 2013 human wound wound infection 16703715 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR1023640 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852113 KpI CG230 230 - - - - NA NA NA NA NA NA NA NAERR1023794 Wyres et al. Australia 2013 human sputum respiratory infection 16870782 KpI CG230 230 - - - - NA NA NA NA NA NA NA NAERR1023711 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852189 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NASRR5082462 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3471 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NAERR1008755 Wyres et al. Australia 2014 human tissue tissue infection 16703746 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NAERR1008739 Wyres et al. Australia 2014 human wound wound infection 16703730 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NAERR1008760 Wyres et al. Australia 2014 human wound wound infection 16703751 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NAERR1008765 Wyres et al. Australia 2014 human wound wound infection 16703756 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NASRR5082469 Wyres et al. Australia 2014 human wound wound infection AUS3503 KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NASRR5082477 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0352 KpI n/a 240 - - - - NA NA NA NA NA NA NA NASRR5082461 Wyres et al. Australia 2014 human sputum respiratory infection AUS3505 KpI n/a 240 - - - - NA NA NA NA NA NA NA NAERR1008667 Wyres et al. Australia 2013 human blood blood_sterile infection 16703541 KpI n/a 247 - - - - NA NA NA NA NA NA NA NAERR1023664 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852138 KpI n/a 252 - - - - NA NA NA NA NA NA NA NAERR1023841 Wyres et al. Australia 2013 human urine urine infection 16870846 KpI CG253 253 - - - - NA NA NA NA NA NA NA NAERR1035981 Wyres et al. Australia 2013 human urine urine infection 16870876 KpI CG253 253 - - - - NA NA NA NA NA NA NA NAERR1023811 Wyres et al. Australia 2013 human BAL respiratory infection 16870816 KpI CG37 256 - - - - NA NA NA NA NA NA NA NAERR1008654 Wyres et al. Australia 2013 human urine urine infection 16703528 KpI CG36 268 ybt - - - 3 144 ICEKp5 absent 14 NA NA NAERR1023788 Wyres et al. Australia 2013 human urine urine infection 16870776 KpI CG36 268 ybt - - - 3 151 ICEKp5 absent 14 NA NA NASRR5082458 Wyres et al. Australia 2013 human urine urine infection AUS3494 KpI n/a 280 ybt - - - 3 327 ICEKp5 present 14 NA NA NAERR1023837 Wyres et al. Australia 2013 human tissue tissue infection 16870842 KpI n/a 292 - - - - NA NA NA NA NA NA NA NAERR1008679 Wyres et al. Australia 2013 human urine urine infection 16703553 KpI CG37 309 - - - - NA NA NA NA NA NA NA NAERR1023694 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852169 KpI n/a 310 - - - - NA NA NA NA NA NA NA NAERR1008672 Wyres et al. Australia 2013 human urine urine infection 16703546 KpI n/a 321 - - - - NA NA NA NA NA NA NA NAERR1023739 Wyres et al. Australia 2013 human fluid fluid infection 16870725 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023628 Wyres et al. Australia 2013 human rectal swab intestinal carriage 1685211 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023631 Wyres et al. Australia 2013 human rectal swab intestinal carriage 1685214 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023674 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852148 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023685 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852159 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023692 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852166 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082487 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0255 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082446 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0424 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082466 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3475 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082467 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3477 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082474 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3478 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082480 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3479 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008629 Wyres et al. Australia 2013 human Ileal conduit urine intestinal infection 1670353 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008632 Wyres et al. Australia 2013 human Ileal conduit urine intestinal infection 1670356 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008674 Wyres et al. Australia 2013 human BAL respiratory infection 16703548 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023783 Wyres et al. Australia 2013 human BAL respiratory infection 16870771 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082454 Wyres et al. Australia 2014 human BAL respiratory infection AUS3501 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008723 Wyres et al. Australia 2013 human sputum respiratory infection 16703713 KpI CG323 323 - - - - NA NA NA NA NA NA NA NASRR5082444 Wyres et al. Australia 2014 human sputum respiratory infection AUS3485 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008653 Wyres et al. Australia 2013 human urine urine infection 16703527 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008670 Wyres et al. Australia 2013 human urine urine infection 16703544 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008705 Wyres et al. Australia 2013 human urine urine infection 16703580 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008779 Wyres et al. Australia 2014 human urine urine infection 16703770 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008781 Wyres et al. Australia 2014 human urine urine infection 16703772 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023751 Wyres et al. Australia 2013 human urine urine infection 16870739 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008652 Wyres et al. Australia 2013 human wound wound infection 16703526 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1008692 Wyres et al. Australia 2013 human wound wound infection 16703566 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1215632 Wyres et al. Australia 2014 human rectal swab intestinal carriage 18090325 KpI CG323 323 - - - - NA NA NA NA NA NA NA NAERR1023861 Wyres et al. Australia 2013 human urine urine infection 16870866 KpI CG17/20 336 - - - - NA NA NA NA NA NA NA NASRR5082491 Wyres et al. Australia 2013 human CSF blood_sterile infection AUS3483 KpI CG258 340 ybt - - - 4 277 ICEKp12 present 16 NA NA NASRR5082456 Wyres et al. Australia 2013 human rectal swab intestinal carriage AH0095 KpI CG258 340 ybt - - - 4 277 ICEKp12 present 16 NA NA NAERR1008700 Wyres et al. Australia 2013 human urine urine infection 16703575 KpI CG258 340 ybt - - - 4 277 ICEKp12 present 16 NA NA NAERR1008735 Wyres et al. Australia 2014 human urine urine infection 16703725 KpI CG258 340 ybt - - - 4 278 ICEKp12 present 16 NA NA NAERR1008737 Wyres et al. Australia 2014 human urine urine infection 16703727 KpI CG258 340 ybt - - - 4 277 ICEKp12 present 16 NA NA NAERR1023659 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852133 KpI n/a 345 - - - - NA NA NA NA NA NA NA NAERR1023740 Wyres et al. Australia 2013 human urine urine infection 16870726 KpI n/a 345 - - - - NA NA NA NA NA NA NA NAERR1035984 Wyres et al. Australia 2013 human B/W respiratory infection 16870879 KpIII n/a 347 - - - - NA NA NA NA NA NA NA NAERR1023819 Wyres et al. Australia 2013 human urine urine infection 16870824 KpIII n/a 347 - - - - NA NA NA NA NA NA NA NAERR1008792 Wyres et al. Australia 2014 human wound wound infection 16703784 KpIII n/a 347 - - - - NA NA NA NA NA NA NA NAERR1015285 Wyres et al. Australia 2014 human wound wound infection 1678065 KpIII n/a 347 - - - - NA NA NA NA NA NA NA NAERR1023668 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852142 KpIII n/a 355 - - - - NA NA NA NA NA NA NA NAERR1215611 Wyres et al. Australia 2013 human urine urine infection 1809034 KpIII n/a 355 - - - - NA NA NA NA NA NA NA NAERR1015303 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780624 KpIII n/a 360 - - - - NA NA NA NA NA NA NA NAERR1008682 Wyres et al. Australia 2013 human urine urine infection 16703556 KpIII n/a 360 - - - - NA NA NA NA NA NA NA NAERR1023769 Wyres et al. Australia 2013 human urine urine infection 16870757 KpIII n/a 360 - - - - NA NA NA NA NA NA NA NAERR1023677 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852151 KpIII n/a 386 - - - - NA NA NA NA NA NA NA NASRR5082476 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0549 KpI n/a 412 - - - - NA NA NA NA NA NA NA NAERR1023820 Wyres et al. Australia 2013 human urine urine infection 16870825 KpI n/a 412 - - - - NA NA NA NA NA NA NA NAERR1008704 Wyres et al. Australia 2013 human urine urine infection 16703579 KpI n/a 412 ybt - - - 3 92 ICEKp4 absent 10 NA NA NASRR5082453 Wyres et al. Australia 2014 human wound wound infection AUS3507 KpI n/a 412 - - - - NA NA NA NA NA NA NA NAERR1015319 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780642 KpII n/a 414 - - - - NA NA NA NA NA NA NA NAERR1023832 Wyres et al. Australia 2013 human urine urine infection 16870837 KpII n/a 414 - - - - NA NA NA NA NA NA NA NAERR1023859 Wyres et al. Australia 2013 human urine urine infection 16870864 KpII n/a 414 - - - - NA NA NA NA NA NA NA NAERR1015284 Wyres et al. Australia 2014 human sputum respiratory infection 1678064 KpI CG133 420 ybt - iro iuc 4 69 ICEKp3 absent 9 NA NA NAERR1023777 Wyres et al. Australia 2013 human urine urine infection 16870765 KpI CG258 437 - - - - NA NA NA NA NA NA NA NAERR1008696 Wyres et al. Australia 2013 human urine urine infection 16703571 KpI n/a 458 - - - - NA NA NA NA NA NA NA NAERR1023629 Wyres et al. Australia 2013 human rectal swab intestinal carriage 1685212 KpI n/a 461 - - - - NA NA NA NA NA NA NA NAERR1008754 Wyres et al. Australia 2014 human urine urine infection 16703745 KpI n/a 461 - - - - NA NA NA NA NA NA NA NAERR1215621 Wyres et al. Australia 2013 human rectal swab intestinal carriage 18090314 KpI n/a 461 - - - - NA NA NA NA NA NA NA NAERR1023824 Wyres et al. Australia 2013 human sputum respiratory infection 16870829 KpII n/a 480 - - - - NA NA NA NA NA NA NA NAERR1023833 Wyres et al. Australia 2013 human wound wound infection 16870838 KpII n/a 480 - - - - NA NA NA NA NA NA NA NAERR1008716 Wyres et al. Australia 2013 human urine urine infection 1670375 KpI CG45 485 - - - - NA NA NA NA NA NA NA NAERR1008717 Wyres et al. Australia 2013 human urine urine infection 1670376 KpI CG45 485 - - - - NA NA NA NA NA NA NA NAERR1023758 Wyres et al. Australia 2013 human sputum respiratory infection 16870746 KpI CG322 491 - - - - NA NA NA NA NA NA NA NAERR1008791 Wyres et al. Australia 2014 human urine urine infection 16703783 KpI CG322 491 - - - - NA NA NA NA NA NA NA NAERR1015293 Wyres et al. Australia 2014 human urine urine infection 16780613 KpI CG322 491 - - - - NA NA NA NA NA NA NA NAERR1015427 Wyres et al. Australia 2014 human wound wound infection 16780773 KpI CG322 491 - - - - NA NA NA NA NA NA NA NAERR1008734 Wyres et al. Australia 2013 human blood blood_sterile infection 16703724 KpI n/a 500 - - - - NA NA NA NA NA NA NA NAERR1008669 Wyres et al. Australia 2013 human sputum respiratory infection 16703543 KpI n/a 520 - - - - NA NA NA NA NA NA NA NAERR1015307 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780628 KpI n/a 537 - - - - NA NA NA NA NA NA NA NAERR1023810 Wyres et al. Australia 2013 human urine urine infection 16870815 KpI CG540 540 - - - - NA NA NA NA NA NA NA NAERR1008761 Wyres et al. Australia 2014 human urine urine infection 16703752 KpI n/a 550 - - - - NA NA NA NA NA NA NA NAERR1035985 Wyres et al. Australia 2013 human urine urine infection 16870880 KpI CG36 564 ybt - - - 4 215 ? absent 9 NA NA NAERR1008628 Wyres et al. Australia 2013 human sputum respiratory infection 1670351 KpI n/a 584 - - - - NA NA NA NA NA NA NA NAERR1023856 Wyres et al. Australia 2013 human urine urine infection 16870861 KpIII n/a 594 - - - - NA NA NA NA NA NA NA NAERR1015296 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780616 KpIII n/a 596 - - - - NA NA NA NA NA NA NA NAERR1023672 Wyres et al. Australia 2014 human throat throat carriage 16852146 KpIII n/a 601 - - - - NA NA NA NA NA NA NA NAERR1023793 Wyres et al. Australia 2013 human urine urine infection 16870781 KpI n/a 603 - - - - NA NA NA NA NA NA NA NAERR1008655 Wyres et al. Australia 2013 human urine urine infection 16703529 KpI n/a 603 ybt - - - 3 229 ICEKp11 present 15 NA NA NAERR1008657 Wyres et al. Australia 2013 human urine urine infection 16703531 KpI n/a 611 - - - - NA NA NA NA NA NA NA NAERR1023781 Wyres et al. Australia 2013 human urine urine infection 16870769 KpIII n/a 616 - - - - NA NA NA NA NA NA NA NAERR1008695 Wyres et al. Australia 2013 human wound wound infection 16703569 KpIII n/a 616 - - - - NA NA NA NA NA NA NA NAERR1008706 Wyres et al. Australia 2013 human urine urine infection 16703581 KpI n/a 629 - - - - NA NA NA NA NA NA NA NAERR1023836 Wyres et al. Australia 2013 human urine urine infection 16870841 KpI n/a 629 - - - - NA NA NA NA NA NA NA NAERR1008640 Wyres et al. Australia 2013 human tip unknown infection 16703514 KpIII n/a 639 - - - - NA NA NA NA NA NA NA NAERR1023855 Wyres et al. Australia 2013 human blood blood_sterile infection 16870860 KpIII n/a 641 - - - - NA NA NA NA NA NA NA NAERR1015306 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780627 KpIII n/a 641 - - - - NA NA NA NA NA NA NA NAERR1023680 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852154 KpIII n/a 641 - - - - NA NA NA NA NA NA NA NAERR1023741 Wyres et al. Australia 2013 human sputum respiratory infection 16870727 KpIII n/a 641 - - - - NA NA NA NA NA NA NA NAERR1215634 Wyres et al. Australia 2014 human rectal swab intestinal carriage 18090327 KpI n/a 643 - - - - NA NA NA NA NA NA NA NAERR1023799 Wyres et al. Australia 2013 human blood blood_sterile infection 1687082 KpI CG661 661 - - - - NA NA NA NA NA NA NA NAERR1023660 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852134 KpI CG661 661 ybt - - - plasmid 29 plasmid absent 4 NA NA NAERR1023699 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852174 KpI CG661 661 ybt - - - 1 273 ICEKp11 present 15 NA NA NAERR1015289 Wyres et al. Australia 2014 human urine urine infection 1678069 KpI CG661 661 - - - - NA NA NA NA NA NA NA NAERR1023804 Wyres et al. Australia 2013 human urine urine infection 1687087 KpI CG661 661 - - - - NA NA NA NA NA NA NA NAERR1008643 Wyres et al. Australia 2013 human urine urine infection 16703517 KpI CG661 661 ybt - - - plasmid 65 plasmid absent 4 NA NA NAERR1008750 Wyres et al. Australia 2014 human urine urine infection 16703741 KpI CG661 661 ybt - - - plasmid 32 plasmid absent 4 NA NA NAERR1023818 Wyres et al. Australia 2013 human urine urine infection 16870823 KpI CG661 661 ybt - - - plasmid 32 plasmid absent 4 NA NA NAERR1023849 Wyres et al. Australia 2013 human blood blood_sterile infection 16870854 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1023846 Wyres et al. Australia 2013 human sputum respiratory infection 16870851 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1035990 Wyres et al. Australia 2013 human sputum respiratory infection 16870885 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1015321 Wyres et al. Australia 2013 human throat throat carriage 16780644 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1023638 Wyres et al. Australia 2013 human throat throat carriage 16852111 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1023634 Wyres et al. Australia 2013 human throat throat carriage 1685217 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1023830 Wyres et al. Australia 2013 human urine urine infection 16870835 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1023867 Wyres et al. Australia 2013 human urine urine infection 16870873 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NASRR5082455 Wyres et al. Australia 2013 human urine urine infection AUS3497 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NASRR5082485 Wyres et al. Australia 2013 human wound wound infection KC0205 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NAERR1008665 Wyres et al. Australia 2013 human urine urine infection 16703539 KpI n/a 690 - - - - NA NA NA NA NA NA NA NAERR1023747 Wyres et al. Australia 2013 human urine urine infection 16870733 KpI n/a 690 - - - - NA NA NA NA NA NA NA NAERR1023809 Wyres et al. Australia 2013 human urine urine infection 16870814 KpI CG29 711 ybt - - - 3 168 ICEKp9 absent 8 NA NA NAERR1023698 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852173 KpI n/a 788 - - - - NA NA NA NA NA NA NA NASRR5082471 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3480 KpI n/a 792 ybt clb - - 3 281 ICEKp10 present 17 3 no noERR1008770 Wyres et al. Australia 2014 human BAL respiratory infection 16703761 KpI n/a 792 ybt clb - - 3 281 ICEKp10 present 17 3 no noERR1008790 Wyres et al. Australia 2014 human urine urine infection 16703781 KpI n/a 792 ybt clb - - 3 281 ICEKp10 present 17 3 yes noERR1023864 Wyres et al. Australia 2013 human urine urine infection 16870869 KpI n/a 792 ybt clb - - 3 281 ICEKp10 present 17 3 no noSRR5082465 Wyres et al. Australia 2014 human wound wound infection AUS3509 KpI n/a 792 ybt clb - - 3 281 ICEKp10 present 17 3 no noERR1023635 Wyres et al. Australia 2013 human rectal swab intestinal carriage 1685218 KpI n/a 857 - - - - NA NA NA NA NA NA NA NAERR1023721 Wyres et al. Australia 2014 human blood blood_sterile infection 1687077 KpI n/a 873 - - - - NA NA NA NA NA NA NA NAERR1023798 Wyres et al. Australia 2013 human urine urine infection 1687081 KpI n/a 882 ybt - - - 4 87 ICEKp4 absent 10 NA NA NAERR1008697 Wyres et al. Australia 2013 human urine urine infection 16703572 KpI n/a 889 ybt - - - 4 151 ICEKp5 absent 14 NA NA NAERR1023854 Wyres et al. Australia 2013 human urine urine infection 16870859 KpIII n/a 919 - - - - NA NA NA NA NA NA NA NAERR1008711 Wyres et al. Australia 2013 human blood blood_sterile infection 16703586 KpIII n/a 925 - - - - NA NA NA NA NA NA NA NAERR1023642 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852115 KpIII n/a 925 - - - - NA NA NA NA NA NA NA NAERR1023845 Wyres et al. Australia 2013 human sputum respiratory infection 16870850 KpIII n/a 925 - - - - NA NA NA NA NA NA NA NAERR1008748 Wyres et al. Australia 2014 human wound wound infection 16703739 KpIII n/a 925 - - - - NA NA NA NA NA NA NA NAERR1015298 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780618 KpI n/a 1001 ybt - - - plasmid 66 plasmid absent 4 NA NA NAERR1023835 Wyres et al. Australia 2013 human urine urine infection 16870840 KpI n/a 1010 - - - - NA NA NA NA NA NA NA NAERR1008726 Wyres et al. Australia 2013 human urine urine infection 16703716 KpI n/a 1017 - - - - NA NA NA NA NA NA NA NASRR5082452 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0620 KpI n/a 1049 ybt - iro iuc 1 7 ICEKp6 absent 5 NA NA NAERR1015286 Wyres et al. Australia 2014 human wound wound infection 1678066 KpI CG29 1109 - - - - NA NA NA NA NA NA NA NAERR1023757 Wyres et al. Australia 2013 human sputum respiratory infection 16870745 KpI CG253 1138 - - - - NA NA NA NA NA NA NA NAERR1008773 Wyres et al. Australia 2014 human urine urine infection 16703764 KpIII n/a 1142 - - - - NA NA NA NA NA NA NA NAERR1023813 Wyres et al. Australia 2013 human urine urine infection 16870818 KpI n/a 1165 - - - - NA NA NA NA NA NA NA NAERR1023678 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852152 KpII n/a 1191 - - - - NA NA NA NA NA NA NA NAERR1008688 Wyres et al. Australia 2013 human urine urine infection 16703562 KpI n/a 1193 - - - - NA NA NA NA NA NA NA NAERR1023774 Wyres et al. Australia 2013 human urine urine infection 16870762 KpI CG490 1263 - - - - NA NA NA NA NA NA NA NAERR1008656 Wyres et al. Australia 2013 human urine urine infection 16703530 KpI CG230 1307 ybt - - - 1 141 ICEKp5 absent 14 NA NA NAERR1023844 Wyres et al. Australia 2013 human sputum respiratory infection 16870849 KpII n/a 1308 - - - - NA NA NA NA NA NA NA NAERR1015308 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780631 KpI n/a 1322 - - - - NA NA NA NA NA NA NA NAERR1023787 Wyres et al. Australia 2013 human urine urine infection 16870775 KpI n/a 1322 - - - - NA NA NA NA NA NA NA NAERR1023746 Wyres et al. Australia 2013 human urine urine infection 16870732 KpI n/a 1393 ybt - - - 1 118 ICEKp13 absent no lineage NA NA NAERR1008689 Wyres et al. Australia 2013 human urine urine infection 16703563 KpI n/a 1441 - - - - NA NA NA NA NA NA NA NAERR1023743 Wyres et al. Australia 2013 human urine urine infection 16870729 KpI n/a 1449 ybt - - - plasmid 116 plasmid absent 4 NA NA NAERR1008762 Wyres et al. Australia 2014 human urine urine infection 16703753 KpIII n/a 1456 - - - - NA NA NA NA NA NA NA NASRR5082489 Wyres et al. Australia 2013 human rectal swab intestinal carriage AH0225 KpI n/a 1464 - - - - NA NA NA NA NA NA NA NASRR5082447 Wyres et al. Australia 2014 human sputum respiratory infection AUS3500 KpI n/a 1464 - - - - NA NA NA NA NA NA NA NAERR1008727 Wyres et al. Australia 2013 human sputum respiratory infection 16703717 KpI CG37 1507 - - - - NA NA NA NA NA NA NA NAERR1008720 Wyres et al. Australia 2013 human urine urine infection 16703710 KpI n/a 1536 ybt - - - plasmid 35 plasmid absent 4 NA NA NAERR1023662 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852136 KpII n/a 1548 - - - - NA NA NA NA NA NA NA NAERR1008771 Wyres et al. Australia 2014 human sputum respiratory infection 16703762 KpII n/a 1548 - - - - NA NA NA NA NA NA NA NAERR1008764 Wyres et al. Australia 2014 human urine urine infection 16703755 KpII n/a 1548 - - - - NA NA NA NA NA NA NA NAERR1023791 Wyres et al. Australia 2013 human urine urine infection 16870779 KpIII n/a 1550 - - - - NA NA NA NA NA NA NA NAERR1023748 Wyres et al. Australia 2013 human urine urine infection 16870734 KpI CG230 1583 - - - - NA NA NA NA NA NA NA NASRR5082490 Wyres et al. Australia 2013 human throat throat carriage AH0034T KpIII n/a 1599 - - - - NA NA NA NA NA NA NA NAERR1008685 Wyres et al. Australia 2013 human urine urine infection 16703559 KpI n/a 1621 - - - - NA NA NA NA NA NA NA NAERR1023716 Wyres et al. Australia 2013 human blood blood_sterile infection 1687072 KpIII n/a 1688 - - - - NA NA NA NA NA NA NA NAERR1008639 Wyres et al. Australia 2013 human urine urine infection 16703513 KpI n/a 1694 - - - - NA NA NA NA NA NA NA NAERR1215620 Wyres et al. Australia 2013 human throat throat carriage 18090313 KpI n/a 1728 - - - - NA NA NA NA NA NA NA NAERR1023688 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852162 KpI n/a 1731 - - - - NA NA NA NA NA NA NA NAERR1023858 Wyres et al. Australia 2013 human urine urine infection 16870863 KpII n/a 1822 - - - - NA NA NA NA NA NA NA NAERR1015314 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780637 KpI n/a 1966 - - - - NA NA NA NA NA NA NA NAERR1215612 Wyres et al. Australia 2013 human urine urine infection 1809035 KpI n/a 1966 - - - - NA NA NA NA NA NA NA NAERR1215617 Wyres et al. Australia 2013 human rectal swab intestinal carriage 18090310 KpIII n/a 1984 - - - - NA NA NA NA NA NA NA NAERR1023643 Wyres et al. Australia 2013 human throat throat carriage 16852116 KpIII n/a 1986 ybt - - - 4 70 ICEKp14 absent no lineage NA NA NAERR1008769 Wyres et al. Australia 2014 human blood blood_sterile infection 16703760 KpI n/a 1997 - - - - NA NA NA NA NA NA NA NAERR1008763 Wyres et al. Australia 2014 human urine urine infection 16703754 KpI n/a 1997 - - - - NA NA NA NA NA NA NA NAERR1008638 Wyres et al. Australia 2013 human urine urine infection 16703512 KpI CG23 2044 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR1008786 Wyres et al. Australia 2014 human fluid fluid infection 16703777 KpIII n/a 2045 - - - - NA NA NA NA NA NA NA NAERR1023637 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852110 KpIII n/a 2089 - - - - NA NA NA NA NA NA NA NAERR1015304 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780625 KpI CG253 2116 - - - - NA NA NA NA NA NA NA NAERR1023808 Wyres et al. Australia 2013 human urine urine infection 16870813 KpI CG253 2116 - - - - NA NA NA NA NA NA NA NAERR1015317 Wyres et al. Australia 2013 human throat throat carriage 16780640 KpI n/a 2136 - - - - NA NA NA NA NA NA NA NAERR1023697 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852172 KpI n/a 2267 - - - - NA NA NA NA NA NA NA NAERR1023805 Wyres et al. Australia 2013 human sputum respiratory infection 16870810 KpI CG37 2370 ybt - - - plasmid 36 plasmid absent 4 NA NA NAERR1023806 Wyres et al. Australia 2013 human urine urine infection INF167 KpI CG37 2370 ybt - - - plasmid 36 plasmid absent 4 NA NA NAERR1023731 Wyres et al. Australia unknown human unknown unknown unknown #N/A KpI n/a 5005 - - - - NA NA NA NA NA NA NA NAERR1215618 Wyres et al. Australia 2013 human rectal swab intestinal carriage 18090311 KpIII n/a 5021 - - - - NA NA NA NA NA NA NA NAERR1015297 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780617 KpI n/a 5085 - - - - NA NA NA NA NA NA NA NAERR1008668 Wyres et al. Australia 2013 human BAL respiratory infection 16703542 KpI CG231 5146 ybt - - - 3 192 ICEKp3 absent 9 NA NA NAERR1015282 Wyres et al. Australia 2014 human BAL respiratory infection 1678062 KpIII n/a 5147 - - - - NA NA NA NA NA NA NA NAERR1035987 Wyres et al. Australia 2013 human blood blood_sterile infection 16870882 KpI n/a 5148 ybt - - - plasmid 65 plasmid absent 4 NA NA NAERR1008742 Wyres et al. Australia 2014 human urine urine infection 16703733 KpI n/a 5148 - - - - NA NA NA NA NA NA NA NAERR1023860 Wyres et al. Australia 2013 human urine urine infection 16870865 KpI n/a 5148 - - - - NA NA NA NA NA NA NA NAERR1035989 Wyres et al. Australia 2013 human urine urine infection 16870884 KpI n/a 5148 - - - - NA NA NA NA NA NA NA NAERR1035988 Wyres et al. Australia 2013 human urine urine infection 16870883 KpI n/a 5148 ybt - - - plasmid 65 plasmid absent 4 NA NA NAERR1008768 Wyres et al. Australia 2014 human blood blood_sterile infection 16703759 KpI n/a 5149 ybt - - - 3 109 ICEKp4 absent 10 NA NA NAERR1008699 Wyres et al. Australia 2013 human blood blood_sterile infection 16703574 KpI CG36 5150 ybt - - - 3 144 ICEKp5 absent 14 NA NA NAERR1008701 Wyres et al. Australia 2013 human blood blood_sterile infection 16703576 KpI CG111 5151 - - - - NA NA NA NA NA NA NA NAERR1023800 Wyres et al. Australia 2013 human blood blood_sterile infection 1687083 KpI CG258 5152 ybt - - - 4 277 ICEKp12 present 16 NA NA NAERR1023720 Wyres et al. Australia 2013 human blood blood_sterile infection 1687076 KpIII n/a 5154 - - - - NA NA NA NA NA NA NA NASRR5082449 Wyres et al. Australia 2014 human blood blood_sterile infection AUS3506 KpIII n/a 5155 - - - - NA NA NA NA NA NA NA NAERR1008673 Wyres et al. Australia 2013 human urine urine infection 16703547 KpIII n/a 5155 - - - - NA NA NA NA NA NA NA NAERR1008778 Wyres et al. Australia 2014 human blood blood_sterile infection 16703769 KpI n/a 5156 - - - - NA NA NA NA NA NA NA NAERR1008712 Wyres et al. Australia 2013 human urine urine infection 1670371 KpI n/a 5158 - - - - NA NA NA NA NA NA NA NAERR1023822 Wyres et al. Australia 2013 human urine urine infection 16870827 KpI n/a 5158 - - - - NA NA NA NA NA NA NA NAERR1023863 Wyres et al. Australia 2013 human urine urine infection 16870868 KpI n/a 5159 - - - - NA NA NA NA NA NA NA NAERR1008756 Wyres et al. Australia 2014 human urine urine infection 16703747 KpI CG17/20 5160 ybt - - - 3 68 ICEKp11 present 15 NA NA NAERR1008777 Wyres et al. Australia 2014 human urine urine infection 16703768 KpI n/a 5161 - - - - NA NA NA NA NA NA NA NAERR1008746 Wyres et al. Australia 2014 human urine urine infection 16703737 KpIII n/a 5162 - - - - NA NA NA NA NA NA NA NAERR1015290 Wyres et al. Australia 2014 human urine urine infection 16780610 KpI n/a 5163 ybt - - - plasmid 31 plasmid absent 4 NA NA NAERR1008660 Wyres et al. Australia 2013 human urine urine infection 16703534 KpI CG133 5164 ybt clb - - 3 267 ICEKp10 present 17 3 no noERR1023803 Wyres et al. Australia 2013 human urine urine infection 1687086 KpI n/a 5165 ybt - - - plasmid 329 plasmid absent 4 NA NA NAERR1023826 Wyres et al. Australia 2013 human urine urine infection 16870831 KpIII n/a 5167 - - - - NA NA NA NA NA NA NA NAERR1023850 Wyres et al. Australia 2013 human urine urine infection 16870855 KpI CG323 5168 - - - - NA NA NA NA NA NA NA NAERR1008719 Wyres et al. Australia 2013 human urine urine infection 1670379 KpI CG253 5170 - - - - NA NA NA NA NA NA NA NAERR1008721 Wyres et al. Australia 2013 human urine urine infection 16703711 KpI n/a 5171 - - - - NA NA NA NA NA NA NA NAERR1008744 Wyres et al. Australia 2014 human urine urine infection 16703735 KpI n/a 5172 - - - - NA NA NA NA NA NA NA NAERR1008772 Wyres et al. Australia 2014 human urine urine infection 16703763 KpI n/a 5173 - - - - NA NA NA NA NA NA NA NAERR1008749 Wyres et al. Australia 2014 human Other swab respiratory infection 16703740 KpII n/a 5174 - - - - NA NA NA NA NA NA NA NAERR1008782 Wyres et al. Australia 2014 human sputum respiratory infection 16703773 KpIII n/a 5175 - - - - NA NA NA NA NA NA NA NAERR1008651 Wyres et al. Australia 2013 human sputum respiratory infection 16703525 KpI n/a 5176 ybt - - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR1023848 Wyres et al. Australia 2013 human sputum respiratory infection 16870853 KpI n/a 5177 - - - - NA NA NA NA NA NA NA NAERR1023857 Wyres et al. Australia 2013 human Sputum respiratory infection 16870862 KpI n/a 5178 - - - - NA NA NA NA NA NA NA NASRR5082463 Wyres et al. Australia 2014 human sputum respiratory infection AUS3508 KpI CG323 5180 - - - - NA NA NA NA NA NA NA NAERR1008694 Wyres et al. Australia 2013 human tissue tissue infection 16703568 KpI CG45 5185 ybt - - - 4 78 ICEKp4 absent 10 NA NA NAERR1008666 Wyres et al. Australia 2013 human urine urine infection 16703540 KpI n/a 5187 - - - - NA NA NA NA NA NA NA NAERR1008671 Wyres et al. Australia 2013 human urine urine infection 16703545 KpIII n/a 5188 - - - - NA NA NA NA NA NA NA NAERR1023839 Wyres et al. Australia 2013 human urine urine infection 16870844 KpI CG34 5189 - - - - NA NA NA NA NA NA NA NAERR1023842 Wyres et al. Australia 2013 human urine urine infection 16870847 KpI n/a 5190 - - - - NA NA NA NA NA NA NA NAERR1008745 Wyres et al. Australia 2014 human urine urine infection 16703736 KpIII n/a 5191 - - - - NA NA NA NA NA NA NA NAERR1008752 Wyres et al. Australia 2014 human urine urine infection 16703743 KpI CG323 5192 - - - - NA NA NA NA NA NA NA NAERR1008650 Wyres et al. Australia 2013 human urine urine infection 16703524 KpI CG45 5193 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1008658 Wyres et al. Australia 2013 human urine urine infection 16703532 KpI CG230 5194 - - - - NA NA NA NA NA NA NA NAERR1008662 Wyres et al. Australia 2013 human urine urine infection 16703536 KpIII n/a 5195 - - - - NA NA NA NA NA NA NA NAERR1008663 Wyres et al. Australia 2013 human urine urine infection 16703537 KpI CG45 5196 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1008676 Wyres et al. Australia 2013 human urine urine infection 16703550 KpI n/a 5197 - - - - NA NA NA NA NA NA NA NAERR1008690 Wyres et al. Australia 2013 human urine urine infection 16703564 KpI n/a 5198 - - - - NA NA NA NA NA NA NA NAERR1008691 Wyres et al. Australia 2013 human urine urine infection 16703565 KpI n/a 5199 - - - - NA NA NA NA NA NA NA NAERR1008709 Wyres et al. Australia 2013 human urine urine infection 16703584 KpIII n/a 5200 - - - - NA NA NA NA NA NA NA NAERR1008710 Wyres et al. Australia 2013 human urine urine infection 16703585 KpI CG45 5201 - - - - NA NA NA NA NA NA NA NAERR1023815 Wyres et al. Australia 2013 human urine urine infection 16870820 KpI n/a 5202 ybt - - - plasmid 117 plasmid absent 4 NA NA NAERR1023829 Wyres et al. Australia 2013 human urine urine infection 16870834 KpI n/a 5203 ybt - - - plasmid 125 plasmid absent 4 NA NA NAERR1023840 Wyres et al. Australia 2013 human urine urine infection 16870845 KpIII n/a 5204 - - - - NA NA NA NA NA NA NA NAERR1023853 Wyres et al. Australia 2013 human urine urine infection 16870858 KpIII n/a 5205 - - - - NA NA NA NA NA NA NA NAERR1023865 Wyres et al. Australia 2013 human urine urine infection 16870871 KpII n/a 5206 - - - - NA NA NA NA NA NA NA NAERR1008713 Wyres et al. Australia 2013 human urine urine infection 1670372 KpI n/a 5207 - - - - NA NA NA NA NA NA NA NAERR1008718 Wyres et al. Australia 2013 human urine urine infection 1670377 KpI CG43 5208 ybt - - - 3 172 ICEKp3 absent 9 NA NA NAERR1008722 Wyres et al. Australia 2013 human urine urine infection 16703712 KpIII n/a 5209 - - - - NA NA NA NA NA NA NA NASRR5082481 Wyres et al. Australia 2014 human rectal swab intestinal carriage AH0297 KpI n/a 5210 - - - - NA NA NA NA NA NA NA NASRR5082445 Wyres et al. Australia 2014 human urine urine infection AUS3502 KpI n/a 5210 - - - - NA NA NA NA NA NA NA NAERR1008767 Wyres et al. Australia 2014 human urine urine infection 16703758 KpI CG29 5211 - - - - NA NA NA NA NA NA NA NAERR1008774 Wyres et al. Australia 2014 human urine urine infection 16703765 KpI n/a 5212 - - - - NA NA NA NA NA NA NA NAERR1015292 Wyres et al. Australia 2014 human urine urine infection 16780612 KpI CG323 5213 - - - - NA NA NA NA NA NA NA NAERR1008677 Wyres et al. Australia 2013 human wound wound infection 16703551 KpI n/a 5214 - - - - NA NA NA NA NA NA NA NAERR1008759 Wyres et al. Australia 2014 human wound wound infection 16703750 KpI n/a 5215 - - - - NA NA NA NA NA NA NA NAERR1008648 Wyres et al. Australia 2013 human urine urine infection 16703522 KpII n/a 5241 - - - - NA NA NA NA NA NA NA NAERR1008647 Wyres et al. Australia 2013 human urine urine infection 16703521 KpI CG111 5242 - - - - NA NA NA NA NA NA NA NAERR1008646 Wyres et al. Australia 2013 human wound wound infection 16703520 KpI n/a 5243 - - - - NA NA NA NA NA NA NA NAERR1008642 Wyres et al. Australia 2013 human urine urine infection 16703516 KpI CG45 5244 - - - - NA NA NA NA NA NA NA NAERR1008641 Wyres et al. Australia 2013 human urine urine infection 16703515 KpI CG253 5245 - - - - NA NA NA NA NA NA NA NAERR1008630 Wyres et al. Australia 2013 human urine urine infection 1670354 KpI n/a 5246 - - - - NA NA NA NA NA NA NA NAERR1023797 Wyres et al. Australia 2013 human tissue tissue infection 16870786 KpI CG45 5247 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR1023796 Wyres et al. Australia 2013 human urine urine infection 16870784 KpI n/a 5248 ybt - - - plasmid 65 plasmid absent 4 NA NA NAERR1023789 Wyres et al. Australia 2013 human urine urine infection 16870777 KpI CG253 5250 ybt - - - 4 135 ICEKp5 absent 14 NA NA NAERR1023785 Wyres et al. Australia 2013 human tissue tissue infection 16870773 KpI n/a 5251 - - - - NA NA NA NA NA NA NA NAERR1023784 Wyres et al. Australia 2013 human BAL respiratory infection 16870772 KpI n/a 5252 ybt - - - 3 122 ICEKp9 absent no lineage NA NA NAERR1023780 Wyres et al. Australia 2013 human urine urine infection 16870768 KpIII n/a 5253 - - - - NA NA NA NA NA NA NA NAERR1023778 Wyres et al. Australia 2013 human urine urine infection 16870766 KpI CG17/20 5254 - - - - NA NA NA NA NA NA NA NAERR1023773 Wyres et al. Australia 2013 human urine urine infection 16870761 KpI CG17/20 5255 - - - - NA NA NA NA NA NA NA NAERR1023772 Wyres et al. Australia 2013 human blood blood_sterile infection 16870760 KpI n/a 5256 - - - - NA NA NA NA NA NA NA NAERR1023768 Wyres et al. Australia 2013 human urine urine infection 16870756 KpII n/a 5257 - - - - NA NA NA NA NA NA NA NAERR1023767 Wyres et al. Australia 2013 human urine urine infection 16870755 KpII n/a 5258 - - - - NA NA NA NA NA NA NA NAERR1023763 Wyres et al. Australia 2013 human urine urine infection 16870751 KpI n/a 5259 - - - - NA NA NA NA NA NA NA NAERR1023756 Wyres et al. Australia 2013 human urine urine infection 16870744 KpI n/a 5260 - - - - NA NA NA NA NA NA NA NAERR1023755 Wyres et al. Australia 2013 human urine urine infection 16870743 Recombinant? n/a 5261 - - - - NA NA NA NA NA NA NA NAERR1023737 Wyres et al. Australia 2013 human urine urine infection 16870723 KpIII n/a 5262 - - - - NA NA NA NA NA NA NA NASRR5082468 Wyres et al. Australia 2013 human rectal swab intestinal carriage AH0034R KpI n/a 5265 - - - - NA NA NA NA NA NA NA NASRR5082457 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3473 KpI n/a 5267 - - - - NA NA NA NA NA NA NA NASRR5082450 Wyres et al. Australia 2014 human rectal swab intestinal carriage AUS3488 KpI n/a 5268 - - - - NA NA NA NA NA NA NA NAERR1023636 Wyres et al. Australia 2013 human rectal swab intestinal carriage 1685219 KpIII n/a 5269 - - - - NA NA NA NA NA NA NA NAERR1023681 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852155 KpI n/a 5270 - - - - NA NA NA NA NA NA NA NAERR1015300 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780621 KpI n/a 5272 - - - - NA NA NA NA NA NA NA NAERR1015305 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780626 KpIII n/a 5273 - - - - NA NA NA NA NA NA NA NAERR1023724 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16870710 KpIII n/a 5274 - - - - NA NA NA NA NA NA NA NAERR1015309 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780632 KpI CG27 5275 - - - - NA NA NA NA NA NA NA NAERR1015318 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780641 KpI n/a 5276 - - - - NA NA NA NA NA NA NA NAERR1015320 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780643 KpI n/a 5277 - - - - NA NA NA NA NA NA NA NAERR1015322 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16780647 KpI n/a 5278 ybt - - - plasmid 33 plasmid absent 4 NA NA NAERR1023639 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852112 KpI n/a 5279 - - - - NA NA NA NA NA NA NA NAERR1023641 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852114 KpIII n/a 5280 - - - - NA NA NA NA NA NA NA NAERR1023647 Wyres et al. Australia 2013 human rectal swab intestinal carriage 16852120 KpII n/a 5281 - - - - NA NA NA NA NA NA NA NAERR1023652 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852125 KpI CG27 5282 - - - - NA NA NA NA NA NA NA NAERR1023654 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852127 KpIII n/a 5283 - - - - NA NA NA NA NA NA NA NAERR1023682 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852156 KpI n/a 5284 - - - - NA NA NA NA NA NA NA NAERR1023687 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852161 KpI n/a 5285 - - - - NA NA NA NA NA NA NA NAERR1023696 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852171 KpIII n/a 5286 - - - - NA NA NA NA NA NA NA NAERR1023700 Wyres et al. Australia 2014 human rectal swab intestinal carriage 16852175 KpIII n/a 5287 - - - - NA NA NA NA NA NA NA NAERR1015302 Wyres et al. Australia 2013 human throat throat carriage 16780623 KpI CG253 5288 - - - - NA NA NA NA NA NA NA NAERR1023630 Wyres et al. Australia 2013 human throat throat carriage 1685213 KpI n/a 5289 - - - - NA NA NA NA NA NA NA NAERR1023633 Wyres et al. Australia 2013 human throat throat carriage 1685216 KpI n/a 5290 - - - - NA NA NA NA NA NA NA NAERR1215615 Wyres et al. Australia 2014 human tissue tissue infection 1809038 KpI n/a 5300 - - - - NA NA NA NA NA NA NA NAERR1215610 Wyres et al. Australia 2013 human urine urine infection 1809033 KpI n/a 5301 - - - - NA NA NA NA NA NA NA NAERR1215633 Wyres et al. Australia 2014 human rectal swab intestinal carriage 18090326 KpIII n/a 5302 - - - - NA NA NA NA NA NA NA NAERR1215619 Wyres et al. Australia 2013 human throat throat carriage 18090312 KpIII n/a 5303 - - - - NA NA NA NA NA NA NA NASRR5082344 Wyres et al. Australia 2009 human blood blood_sterile infection A0112442 KpI n/a 13 - - - - NA NA NA NA NA NA NA NASRR5082338 Wyres et al. Australia 2013 human blood blood_sterile infection A0428759 KpI CG23 23 ybt - iroCDN iuc 4 200 ICEKp3 absent 9 NA NA NASRR5082328 Wyres et al. Australia 2010 human blood blood_sterile infection A0171016 KpI CG23 23 ybt - iro iuc 4 201 ICEKp3 absent 9 NA NA NASRR5082339 Wyres et al. Australia unknown human pneumonia respiratory infection A0073104 KpI CG23 23 ybt - iroCDN iuc 4 200 ICEKp3 absent 9 NA NA NASRR5082345 Wyres et al. Australia 2008 human blood blood_sterile infection A0060996 KpI CG37 37 ybt - - - 4 102 ICEKp4 absent 10 NA NA NASRR5082331 Wyres et al. Australia 2012 human blood blood_sterile infection A0340876 KpI n/a 39 - - - - NA NA NA NA NA NA NA NASRR5082334 Wyres et al. Australia 2008 human blood blood_sterile infection A0126884 KpI CG86 86 ybt - iro iuc 3 211 ICEKp3 absent 9 NA NA NASRR5082332 Wyres et al. Australia 2013 human blood blood_sterile infection A0419199 KpI CG86 86 ybt - - iuc 3 213 ICEKp3 absent 9 NA NA NASRR5082343 Wyres et al. Australia 2008 human blood blood_sterile infection A0067181 KpI CG86 86 ybt - iro iuc 3 211 ICEKp3 absent 9 NA NA NASRR5082333 Wyres et al. Australia 2009 human blood blood_sterile infection A0108640 KpI CG86 86 ybt - iro iuc 3 212 ICEKp3 absent 9 NA NA NASRR5082329 Wyres et al. Australia 2009 human blood blood_sterile infection A0111628 KpI CG152 152 - - - - NA NA NA NA NA NA NA NASRR5082342 Wyres et al. Australia unknown human unknown unknown infection A0312385 KpI CG322 322 - - - - NA NA NA NA NA NA NA NASRR5082341 Wyres et al. Australia 2010 human blood blood_sterile infection A0195637 KpI CG661 661 - - - - NA NA NA NA NA NA NA NASRR5082340 Wyres et al. Australia 2009 human blood blood_sterile infection A0124098 KpI n/a 1065 - - - - NA NA NA NA NA NA NA NASRR5082337 Wyres et al. Australia 2008 human blood blood_sterile infection A0075906 KpI CG66 2039 ybt clb iro iuc 3 39 ICEKp10 present 12 1 yes noSRR5082336 Wyres et al. Australia 2008 human blood blood_sterile infection A0048067 KpI CG66 2039 ybt clb iro iuc 3 41 ICEKp10 present 12 1 ? ?SRR5082330 Wyres et al. Australia 2008 human blood blood_sterile infection A0052072 KpI n/a 5119 ybt - - - 3 89 ICEKp4 absent 10 NA NA NASRR5082335 Wyres et al. Australia unknown human unknown unknown infection A0336002 KpI n/a 5232 - - - - NA NA NA NA NA NA NA NAERR560524 Bialek et al. France 1992 human Skin lesion skin infection SB4762 KpI n/a 12 - - - - NA NA NA NA NA NA NA NAERR560502 Bialek et al. France 2004 human blood blood_sterile infection SB3434 KpI CG14/15 14 ybt - iro iuc 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562351 Bialek et al. France 1988 horse unknown unknown infection SB3310 KpI CG23 23 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562352 Bialek et al. France 2004 horse unknown unknown infection SB3380 KpI CG23 23 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562350 Bialek et al. France 1985 horse unknown unknown unknown SB3309 KpI CG23 23 ybt clb - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560521 Bialek et al. Madagascar 2007 human Pus abscess_pus infection SB4720 KpI CG23 23 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560523 Bialek et al. Madagascar 2007 human Pus abscess_pus infection SB4722 KpI CG23 23 ybt clb iro iuc 1 14 ICEKp10 present 1 2 no noERR560510 Bialek et al. France 2010 human blood blood_sterile infection SB4448 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NAERR560505 Bialek et al. France 2008 human blood blood_sterile infection SB4384 KpI CG23 23 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560506 Bialek et al. France 2008 human liver pus liver infection SB4385 KpI CG23 23 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562353 Bialek et al. Taiwan unknown human liver pus liver infection SB3926 KpI CG23 23 ybt - iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562354 Bialek et al. Taiwan unknown human liver pus liver infection SB3927 KpI CG23 23 ybt clb iro ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560522 Bialek et al. Vietnam 2008 human Post-operative fluid unknown infection SB4721 KpI CG23 23 - clb iro iuc NA NA ICEKp10*-ybt present NA 2 ? ?ERR560508 Bialek et al. France 2009 human unknown unknown infection SB4446 KpI CG23 23 ybt - iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562357 Bialek et al. France 2011 human unknown unknown infection SB4467 KpI CG23 23 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562360 Bialek et al. France 2012 human unknown unknown infection SB4698 KpI CG23 23 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560519 Bialek et al. France 2008 human blood blood_sterile infection SB4538 KpI CG25 25 - - iro iuc NA NA NA NA NA NA NA NAERR560525 Bialek et al. France 2012 human urine urine infection SB4763 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR560501 Bialek et al. France unknown human liver pus liver infection SB3431 KpI CG23 57 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562359 Bialek et al. France 2011 human liver pus liver infection SB4565 KpI CG23 57 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560500 Bialek et al. Martinique 2003 human Anal pus abscess_pus infection SB3332 KpI CG65 65 - - iro iuc NA NA NA NA NA NA NA NAERR560513 Bialek et al. France 1987 lemur liver liver infection SB4472 KpI CG65 65 - - iro iuc NA NA NA NA NA NA NA NAERR560509 Bialek et al. France 2009 human CSF blood_sterile infection SB4447 KpI CG86 86 - - iro iuc NA NA NA NA NA NA NA NAERR560512 Bialek et al. Taiwan unknown human unknown unknown infection SB4454 KpI CG86 86 - - iro iuc NA NA NA NA NA NA NA NAERR560499 Bialek et al. unknown unknown unknown unknown unknown unknown SB3197 KpI CG86 86 ybt - - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562348 Bialek et al. The Netherlands 1999 horse abdomen intestinal infection SB2803 KpI n/a 163 ybt - - - 2/3? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR562356 Bialek et al. France 2009 human urine urine infection SB4450 KpI CG258 340 - - - - NA NA NA NA NA NA NA NAERR560518 Bialek et al. France 2008 human ascitic fluid intestinal infection SB4537 KpI CG65 375 - - - - NA NA NA NA NA NA NA NAERR560507 Bialek et al. France 2008 human blood blood_sterile infection SB4386 KpI CG380 380 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560516 Bialek et al. France 2010 human blood blood_sterile infection SB4533 KpI CG380 380 ybt clb iro iuc ? 4 ICEKp10 absent 12 1 yes noERR560517 Bialek et al. France 2010 human blood blood_sterile infection SB4534 KpI CG380 380 ybt clb iro iuc 2/3? 1 ICEKp10 present 12 1 yes ?ERR560520 Bialek et al. France 2008 human blood blood_sterile infection SB4539 KpI CG380 380 ybt clb iro iuc 1 2 ICEKp10 present 12 1 yes noERR560503 Bialek et al. France 2009 human unknown unknown infection SB4312 KpI n/a 382 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR560515 Bialek et al. France unknown human unknown unknown infection SB4523 KpI n/a 520 - - - - NA NA NA NA NA NA NA NAERR560514 Bialek et al. France unknown human BAL respiratory infection SB4519 KpI n/a 559 ybt - iro iuc 4 328 ICEKp1 absent 2 NA NA NAERR560511 Bialek et al. France 2010 human liver pus liver infection SB4449 KpI CG380 679 ybt clb iro iuc ? 3 ICEKp10 present 12 1 ? ?SRR1561199 Bowers et al. Brazil 2006 human unknown unknown unknown Brazil-2006 KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561204 Bowers et al. Brazil 2009 human unknown unknown unknown Brazil-2009a KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561227 Bowers et al. Guatemala 2009 human unknown unknown unknown Guatemala-2009 KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561283 Bowers et al. Thailand 2007 human unknown unknown unknown Thailand-2007 KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561284 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008a KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561285 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008b KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561298 Bowers et al. USA 2010 human unknown unknown unknown US-CA-2010a KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561320 Bowers et al. USA 2006 human unknown unknown unknown US-MD-2006 KpI CG258 11 - - - - NA NA NA NA NA NA NA NASRR1561210 Bowers et al. Brazil 2010 human unknown unknown unknown Brazil-2010e KpI CG258 11 ybt - - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1561228 Bowers et al. Hong Kong 2008 human unknown unknown unknown Hong Kong-2008 KpI CG258 11 ybt - - - 1 26 ICEKp4 ? 10 NA NA NASRR1561274 Bowers et al. Malaysia 2009 human unknown unknown unknown Malaysia-2009 KpI CG258 11 ybt - - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1561282 Bowers et al. Singapore 2008 human unknown unknown unknown Singapore-2008 KpI CG258 11 ybt - - - 1 26 ICEKp4 absent 10 NA NA NASRR1561234 Bowers et al. Indonesia 2008 unknown unknown unknown unknown unknown KpI CG258 11 ybt - - - ? 105 ? absent 10 NA NA NASRR1561273 Bowers et al. Malaysia 2008 unknown unknown unknown unknown unknown KpI CG258 11 ybt - - - ? 22 ? ? 10 NA NA NASRR1561323 Bowers et al. USA 2006 human unknown unknown unknown US-MO-2006 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NASRR1561300 Bowers et al. USA 2011 human unknown unknown unknown US-CA-2011 KpI CG14/15 14 ybt - - - 1 140 ICEKp5 absent 14 NA NA NASRR1561314 Bowers et al. USA 2008 human unknown unknown unknown US-IL-2008b KpI CG14/15 14 ybt - - - 1 106 ICEKp4 absent 10 NA NA NASRR1561321 Bowers et al. USA 2011 human unknown unknown unknown US-MD-2011 KpI CG14/15 14 ybt - - - 1 140 ICEKp5 absent 14 NA NA NASRR1561212 Bowers et al. Canada 2009 human unknown unknown unknown Canada-2009b KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NASRR1561307 Bowers et al. USA 2006 human unknown unknown unknown US-GA-2006b KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NASRR1561250 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009f KpI CG37 37 - - - - NA NA NA NA NA NA NA NASRR1561324 Bowers et al. USA 1996 human unknown unknown unknown US-NC-1996 KpI CG37 37 - - - - NA NA NA NA NA NA NA NASRR1561299 Bowers et al. USA 2010 human unknown unknown unknown US-CA-2010b KpI CG37 37 ybt - - - 1 222 ICEKp6 absent no lineage NA NA NASRR1561358 Bowers et al. USA 2011 human unknown unknown unknown US-TX-2011 KpI n/a 39 ybt - - - 3 294 ICEKp12 present 16 NA NA NASRR1561338 Bowers et al. USA 2004 human unknown unknown unknown US-NY-2004d KpI n/a 42 - - - - NA NA NA NA NA NA NA NASRR1561230 Bowers et al. India 2007 human unknown unknown unknown India-2007b KpI CG43 43 - - - - NA NA NA NA NA NA NA NASRR1561340 Bowers et al. USA 2005 human unknown unknown unknown US-NY-2005b KpI CG65 65 ybt clb iro iuc 4 235 ICEKp10 absent 17 3 no noSRR1561362 Bowers et al. USA 2010 human unknown unknown unknown US-WA-2010 KpI CG147 147 - - - - NA NA NA NA NA NA NA NASRR1561213 Bowers et al. Canada 2009 human unknown unknown unknown Canada-2009c KpI CG152 152 - - - - NA NA NA NA NA NA NA NASRR1561319 Bowers et al. USA 2005 human unknown unknown unknown US-MD-2005 KpI CG34 228 - - - - NA NA NA NA NA NA NA NASRR1561335 Bowers et al. USA 2004 human unknown unknown unknown US-NY-2004a KpI n/a 234 ybt clb - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1561200 Bowers et al. Brazil 2007 human unknown unknown unknown Brazil-2007a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561201 Bowers et al. Brazil 2007 human unknown unknown unknown Brazil-2007b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561217 Bowers et al. Denmark 2009 human unknown unknown unknown Denmark-2009a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561218 Bowers et al. Denmark 2009 human unknown unknown unknown Denmark-2009b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561219 Bowers et al. Finland 2009 human unknown unknown unknown Finland-2009a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561220 Bowers et al. Finland 2009 human unknown unknown unknown Finland-2009b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561221 Bowers et al. Finland 2009 human unknown unknown unknown Finland-2009c KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561222 Bowers et al. Greece 2007 human unknown unknown unknown Greece-2007 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561225 Bowers et al. Greece 2010 human unknown unknown unknown Greece-2010 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561226 Bowers et al. Greece 2011 human unknown unknown unknown Greece-2011 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561239 Bowers et al. Italy 2008 human unknown unknown unknown Italy-2008 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561240 Bowers et al. Italy 2009 human unknown unknown unknown Italy-2009 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561244 Bowers et al. Italy 2008 human unknown unknown unknown Italy-Palermo-2008 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561245 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561246 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561247 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009c KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561248 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009d KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561249 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009e KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561251 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009g KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561252 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009h KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561253 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009i KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561254 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009j KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561255 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009k KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561256 Bowers et al. Italy 2009 human unknown unknown unknown Italy-Palermo-2009l KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561257 Bowers et al. Italy 2010 human unknown unknown unknown Italy-Palermo-2010a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561258 Bowers et al. Italy 2010 human unknown unknown unknown Italy-Palermo-2010b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561259 Bowers et al. Italy 2010 human unknown unknown unknown Italy-Palermo-2010c KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561260 Bowers et al. Italy 2010 human unknown unknown unknown Italy-Palermo-2010d KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561261 Bowers et al. Italy 2010 human unknown unknown unknown Italy-Palermo-2010e KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561262 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561263 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561264 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011c KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561265 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011d KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561266 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011e KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561267 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011f KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561268 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011g KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561269 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011h KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561270 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011i KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561271 Bowers et al. Italy 2011 human unknown unknown unknown Italy-Palermo-2011j KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561276 Bowers et al. Poland 2008 human unknown unknown unknown Poland-2008 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561277 Bowers et al. Poland 2009 human unknown unknown unknown Poland-2009a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561278 Bowers et al. Poland 2009 human unknown unknown unknown Poland-2009b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561280 Bowers et al. Poland 2009 human unknown unknown unknown Poland-2009d KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561281 Bowers et al. Poland 2009 human unknown unknown unknown Poland-2009e KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561293 Bowers et al. USA 2006 human unknown unknown unknown US-AZ-2006a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561294 Bowers et al. USA 2006 human unknown unknown unknown US-AZ-2006b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561296 Bowers et al. USA 2007 human unknown unknown unknown US-CA-2007b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561301 Bowers et al. USA 2007 human unknown unknown unknown US-CO-2007 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561302 Bowers et al. USA 2006 human unknown unknown unknown US-DE-2006 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561305 Bowers et al. USA 2011 human unknown unknown unknown US-FL-2011 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561306 Bowers et al. USA 2006 human unknown unknown unknown US-GA-2006a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561308 Bowers et al. USA 2007 human unknown unknown unknown US-GA-2007 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561309 Bowers et al. USA 2009 human unknown unknown unknown US-GA-2009a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561311 Bowers et al. USA 2009 human unknown unknown unknown US-GA-2009c KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561313 Bowers et al. USA 2008 human unknown unknown unknown US-IL-2008a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561316 Bowers et al. USA 2009 human unknown unknown unknown US-IL-2009b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561318 Bowers et al. USA 2008 human unknown unknown unknown US-MA-2008 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561327 Bowers et al. USA 2003 human unknown unknown unknown US-NJ-2003 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561328 Bowers et al. USA 2004 human unknown unknown unknown US-NJ-2004a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561329 Bowers et al. USA 2004 human unknown unknown unknown US-NJ-2004b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561331 Bowers et al. USA 2006 human unknown unknown unknown US-NJ-2006 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561332 Bowers et al. USA 2007 human unknown unknown unknown US-NJ-2007a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561333 Bowers et al. USA 2007 human unknown unknown unknown US-NJ-2007b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561334 Bowers et al. USA 2007 human unknown unknown unknown US-NM-2007 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561336 Bowers et al. USA 2004 human unknown unknown unknown US-NY-2004b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561339 Bowers et al. USA 2005 human unknown unknown unknown US-NY-2005a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561341 Bowers et al. USA 2005 human unknown unknown unknown US-NY-2005c KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561343 Bowers et al. USA 2009 human unknown unknown unknown US-NY-2009a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561346 Bowers et al. USA 2010 human unknown unknown unknown US-NY-2010 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561347 Bowers et al. USA 2010 human unknown unknown unknown US-OR-2010 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561349 Bowers et al. USA 2005 human unknown unknown unknown US-PA-2005a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561350 Bowers et al. USA 2005 human unknown unknown unknown US-PA-2005b KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561351 Bowers et al. USA 2007 human unknown unknown unknown US-PA-2007 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561353 Bowers et al. USA 2011 human unknown unknown unknown US-PA-2011a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561355 Bowers et al. USA 2008 human unknown unknown unknown US-RI-2008 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561360 Bowers et al. USA 2008 human unknown unknown unknown US-VA-2008a KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1561215 Bowers et al. Colombia 2009 human unknown unknown unknown Colombia-2009a KpI CG258 258 ybt clb - - 4 265 ICEKp10 present 17 3 no noSRR1561216 Bowers et al. Colombia 2009 human unknown unknown unknown Colombia-2009b KpI CG258 258 ybt clb - - 4 265 ICEKp10 present 17 3 no noSRR1561223 Bowers et al. Greece 2008 human unknown unknown unknown Greece-2008 KpI CG258 258 ybt - - - 3 299 ICEKp2 absent 13 NA NA NASRR1561224 Bowers et al. Greece 2009 human unknown unknown unknown Greece-2009 KpI CG258 258 ybt - - - 4 298 ICEKp2 absent 13 NA NA NASRR1561241 Bowers et al. Italy 2011 human unknown unknown unknown Italy-2011a KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NASRR1561242 Bowers et al. Italy 2011 human unknown unknown unknown Italy-2011b KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NASRR1561303 Bowers et al. USA 2007 human unknown unknown unknown US-DE-2007 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 no noSRR1561312 Bowers et al. USA 2009 human unknown unknown unknown US-GA-2009d KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes noSRR1561315 Bowers et al. USA 2009 human unknown unknown unknown US-IL-2009a KpI CG258 258 ybt clb - - 4 291 ICEKp10 present 17 3 no noSRR1561317 Bowers et al. USA 2007 human unknown unknown unknown US-MA-2007 KpI CG258 258 ybt clb - - 3/2? 247 ICEKp10 present 17 3 yes noSRR1561325 Bowers et al. USA 2011 human unknown unknown unknown US-ND-2011 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbBSRR1561326 Bowers et al. USA 2008 human unknown unknown unknown US-NH-2008 KpI CG258 258 ybt clb - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1561330 Bowers et al. USA 2005 human unknown unknown unknown US-NJ-2005 KpI CG258 258 ybt clb - - 2/3? 271 ICEKp10 present 17 3 no noSRR1561342 Bowers et al. USA 2005 human unknown unknown unknown US-NY-2005d KpI CG258 258 ybt clb - - 4 226 ICEKp10 present 17 3 no noSRR1561344 Bowers et al. USA 2009 human unknown unknown unknown US-NY-2009b KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NASRR1561345 Bowers et al. USA 2009 human unknown unknown unknown US-NY-2009c KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 no noSRR1561352 Bowers et al. USA 2008 human unknown unknown unknown US-PA-2008 KpI CG258 258 ybt clb - - 4 293 ICEKp10 present 17 3 ? ?SRR1561354 Bowers et al. USA 2011 human unknown unknown unknown US-PA-2011b KpI CG258 258 ybt clb - - 4 292 ICEKp10 present 17 3 ? ?SRR1561356 Bowers et al. USA 2012 human unknown unknown unknown US-SD-2012 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 ? ?SRR1561363 Bowers et al. USA 2011 human unknown unknown unknown US-WV-2011a KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 no noSRR1561364 Bowers et al. USA 2011 human unknown unknown unknown US-WV-2011b KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 ? ?SRR1561236 Bowers et al. Israel 2007 human unknown unknown unknown Israel-2007b KpI n/a 277 - - - - NA NA NA NA NA NA NA NASRR1561348 Bowers et al. USA 2001 human unknown unknown unknown US-PA-2001 KpII n/a 334 - - - - NA NA NA NA NA NA NA NASRR1561206 Bowers et al. Brazil 2010 human unknown unknown unknown Brazil-2010a KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561207 Bowers et al. Brazil 2010 human unknown unknown unknown Brazil-2010b KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561237 Bowers et al. Israel 2007 human unknown unknown unknown Israel-2007c KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561287 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008d KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561289 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008f KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561290 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008g KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561291 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008h KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561292 Bowers et al. Thailand 2008 human unknown unknown unknown Thailand-2008i KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561295 Bowers et al. USA 2007 human unknown unknown unknown US-CA-2007a KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1561238 Bowers et al. Israel 2007 human unknown unknown unknown Israel-2007d KpI n/a 376 - - - - NA NA NA NA NA NA NA NASRR1561202 Bowers et al. Brazil 2008 human unknown unknown unknown Brazil-2008a KpI CG258 437 - - - - NA NA NA NA NA NA NA NASRR1561203 Bowers et al. Brazil 2008 human unknown unknown unknown Brazil-2008b KpI CG258 437 - - - - NA NA NA NA NA NA NA NASRR1561205 Bowers et al. Brazil 2009 human unknown unknown unknown Brazil-2009b KpI CG258 437 - - - iucBC NA NA NA NA NA NA NA NASRR1561232 Bowers et al. India 2008 human unknown unknown unknown India-2008b KpI CG258 437 - - - - NA NA NA NA NA NA NA NASRR1561233 Bowers et al. India 2008 human unknown unknown unknown India-2008c KpI CG258 437 - - - - NA NA NA NA NA NA NA NASRR1561211 Bowers et al. Canada 2009 human unknown unknown unknown Canada-2009a KpI CG258 512 - - - - NA NA NA NA NA NA NA NASRR1561243 Bowers et al. Italy 2011 human unknown unknown unknown Italy-2011c KpI CG258 512 - - - - NA NA NA NA NA NA NA NASRR1561361 Bowers et al. USA 2008 human unknown unknown unknown US-VA-2008b KpI n/a 719 - - - - NA NA NA NA NA NA NA NASRR1561297 Bowers et al. USA 2008 human unknown unknown unknown US-CA-2008 KpI CG258 833 - - - iucBC NA NA NA NA NA NA NA NASRR1561209 Bowers et al. Brazil 2010 human unknown unknown unknown Brazil-2010d KpI CG258 855 - - - - NA NA NA NA NA NA NA NASRR1561208 Bowers et al. Brazil 2010 human unknown unknown unknown Brazil-2010c KpI CG258 855 ybt - - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1561198 Bowers et al. Australia 2010 human unknown unknown unknown Australia-2010 KpI CG258 1199 ybt - - - 4 299 ICEKp2 absent 13 NA NA NASRR1561357 Bowers et al. USA 2001 human unknown unknown unknown US-TX-2001 KpI n/a 1978 - - - - NA NA NA NA NA NA NA NASRR1561304 Bowers et al. USA 2008 human unknown unknown unknown US-FL-2008 KpI n/a 5098 - - - - NA NA NA NA NA NA NA NASRR1561310 Bowers et al. USA 2009 human unknown unknown unknown US-GA-2009b KpIII n/a 5099 - - - - NA NA NA NA NA NA NA NASRR1561337 Bowers et al. USA 2004 human unknown unknown unknown US-NY-2004c KpI n/a 5100 - - - - NA NA NA NA NA NA NA NASRR1561214 Bowers et al. Canada 2009 human unknown unknown unknown Canada-2009d KpI n/a 5101 - - - - NA NA NA NA NA NA NA NAERR349784 Chung et al. Nepal 2012 human rectal swab intestinal carriage 209 KpI n/a 1 - - - - NA NA NA NA NA NA NA NAERR349806 Chung et al. Nepal 2012 human urine urine infection 321 KpI n/a 1 - - - - NA NA NA NA NA NA NA NAERR349854 Chung et al. Nepal 2012 human urine urine infection 599 KpI CG540 4 ybt - - - 4 188 ICEKp3 absent 9 NA NA NAERR349822 Chung et al. Nepal 2012 human urine urine infection 448 KpI CG258 11 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR349789 Chung et al. Nepal 2012 human Umbilical pus abscess_pus infection 230 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR349791 Chung et al. Nepal 2012 human blood blood_sterile infection 237 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR349756 Chung et al. Nepal 2012 human blood blood_sterile infection 94 KpI CG14/15 14 ybt - - - 1 190 ICEKp3 absent 9 NA NA NAERR349803 Chung et al. Nepal 2012 human Pus abscess_pus infection 305 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349826 Chung et al. Nepal 2012 human Pus abscess_pus infection 486 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349752 Chung et al. Nepal 2012 human blood blood_sterile infection 80 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349753 Chung et al. Nepal 2012 human blood blood_sterile infection 81 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349754 Chung et al. Nepal 2012 human blood blood_sterile infection 86 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349755 Chung et al. Nepal 2012 human blood blood_sterile infection 93 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349763 Chung et al. Nepal 2012 human blood blood_sterile infection 120 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349764 Chung et al. Nepal 2012 human blood blood_sterile infection 126 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349767 Chung et al. Nepal 2012 human blood blood_sterile infection 132 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349808 Chung et al. Nepal 2012 human Catheter tip catheter unknown 352 KpI CG14/15 15 ybt - - - 1 23 ICEKp4 absent 10 NA NA NAERR349774 Chung et al. Nepal 2012 human rectal swab intestinal carriage 157 KpI CG14/15 15 ybt - - - 1 325 ICEKp4 absent 10 NA NA NAERR349824 Chung et al. Nepal 2012 human sputum respiratory infection 482 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR349775 Chung et al. Nepal 2012 human ET Tip respiratory unknown 159 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR349759 Chung et al. Nepal 2012 human sputum respiratory infection 108 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349766 Chung et al. Nepal 2012 human sputum respiratory infection 131 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349757 Chung et al. Nepal 2012 human tracheal aspirate respiratory infection 98 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349823 Chung et al. Nepal 2012 human ET Secreation respiratory unknown 458 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349748 Chung et al. Nepal 2012 human ET Tip respiratory unknown 24 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349751 Chung et al. Nepal 2012 human ET Tip respiratory unknown 72 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349825 Chung et al. Nepal 2012 human ET Tip respiratory unknown 484 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349844 Chung et al. Nepal 2012 human ET Tip respiratory unknown 567 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NAERR349819 Chung et al. Nepal 2012 human Folyes tip unknown unknown 435 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR349749 Chung et al. Nepal 2012 human urine urine infection 50 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349765 Chung et al. Nepal 2012 human urine urine infection 127 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR349812 Chung et al. Nepal 2012 human urine urine infection 412 KpI CG14/15 15 ybt - - - 3 17 ICEKp4 absent 10 NA NA NAERR349828 Chung et al. Nepal 2012 human urine urine infection 501 KpI CG14/15 15 ybt - - - 1 228 ICEKp12 present 16 NA NA NAERR349800 Chung et al. Nepal 2012 human ET Secreation respiratory unknown 283 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR349799 Chung et al. Nepal 2012 human ET Tip respiratory unknown 281 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR349816 Chung et al. Nepal 2012 human urine urine infection 426 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR349853 Chung et al. Nepal 2012 human urine urine infection 588 KpI CG25 25 ybt - - - ? 149 ICEKp5 present 14 NA NA NAERR349820 Chung et al. Nepal 2012 human ET Tip respiratory unknown 441 KpI CG29 29 ybt - - - 1 151 ICEKp5 absent 14 NA NA NAERR349842 Chung et al. Nepal 2012 human urine urine infection 550 KpI CG29 29 ybt - - - 1 304 ICEKp2 absent 13 NA NA NAERR349807 Chung et al. Nepal 2012 human tissue tissue infection 329 KpI CG35 35 ybt - - - 4 187 ICEKp3 absent 9 NA NA NAERR349798 Chung et al. Nepal 2012 human sputum respiratory infection 276 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR349747 Chung et al. Nepal 2012 human urine urine infection 16 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR349785 Chung et al. Nepal 2012 human sputum respiratory infection 212 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR349777 Chung et al. Nepal 2012 human sputum respiratory infection 170 KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR349795 Chung et al. Nepal 2012 human Umbilical pus abscess_pus infection 270 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349821 Chung et al. Nepal 2012 human blood blood_sterile infection 446 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349833 Chung et al. Nepal 2012 human blood blood_sterile infection 519 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349835 Chung et al. Nepal 2012 human blood blood_sterile infection 526 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349838 Chung et al. Nepal 2012 human blood blood_sterile infection 539 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349839 Chung et al. Nepal 2012 human blood blood_sterile infection 540 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349841 Chung et al. Nepal 2012 human blood blood_sterile infection 544 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349845 Chung et al. Nepal 2012 human blood blood_sterile infection 568 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349847 Chung et al. Nepal 2012 human blood blood_sterile infection 573 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349849 Chung et al. Nepal 2012 human CSF blood_sterile infection 577 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349813 Chung et al. Nepal 2012 human ET Tip respiratory unknown 420 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349817 Chung et al. Nepal 2012 human ET Tip respiratory unknown 432 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349814 Chung et al. Nepal 2012 human suction tip unknown unknown 422 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349846 Chung et al. Nepal 2012 human urine urine infection 570 KpI CG152 152 - - - - NA NA NA NA NA NA NA NAERR349843 Chung et al. Nepal 2012 human urine urine infection 558 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NAERR349770 Chung et al. Nepal 2012 human sputum respiratory infection 139 KpI n/a 297 - - - - NA NA NA NA NA NA NA NAERR349773 Chung et al. Nepal 2012 human Catheter tip catheter unknown 153 KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR349787 Chung et al. Nepal 2012 human sputum respiratory infection 215 KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR349797 Chung et al. Nepal 2012 human tissue tissue infection 273 KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR349768 Chung et al. Nepal 2012 human Pus abscess_pus infection 136 KpI CG258 340 - - - - NA NA NA NA NA NA NA NAERR349834 Chung et al. Nepal 2012 human Catheter tip catheter unknown 524 KpI CG258 340 - - - - NA NA NA NA NA NA NA NAERR349805 Chung et al. Nepal 2012 human urine urine infection 320 KpI CG258 340 ybt - - - 4 277 ICEKp12 present 16 NA NA NAERR349848 Chung et al. Nepal 2012 human blood blood_sterile infection 573 KpI n/a 441 ybt - - - 3 174 ICEKp3 absent 9 NA NA NAERR349811 Chung et al. Nepal 2012 human urine urine infection 405 KpI n/a 628 - - - - NA NA NA NA NA NA NA NAERR349780 Chung et al. Nepal 2012 human sputum respiratory infection 186 KpI CG661 661 - - - - NA NA NA NA NA NA NA NAERR349788 Chung et al. Nepal 2012 human sputum respiratory infection 225 KpI CG661 661 - - - - NA NA NA NA NA NA NA NAERR349815 Chung et al. Nepal 2012 human urine urine infection 424 KpI CG29 711 - - - - NA NA NA NA NA NA NA NAERR349786 Chung et al. Nepal 2012 human sputum respiratory infection 214 KpI n/a 716 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR349818 Chung et al. Nepal 2012 human wound wound infection 434 KpI n/a 716 - - - - NA NA NA NA NA NA NA NAERR349769 Chung et al. Nepal 2012 human Vaginal swab vagina unknown 137 KpI n/a 1787 - - - - NA NA NA NA NA NA NA NAERR349790 Chung et al. Nepal 2012 human urine urine infection 234 KpI CG874 2326 - - - - NA NA NA NA NA NA NA NAERR349793 Chung et al. Nepal 2012 human sputum respiratory infection 262 KpII n/a 5295 - - - - NA NA NA NA NA NA NA NASRR2098701 Davis et al. USA 2012 chicken Food Food NA Kpn0006 KpI CG540 6 ybt - - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR2098765 Davis et al. USA 2012 turkey Food Food NA Kpn0035 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NASRR2098684 Davis et al. USA 2012 turkey Food Food NA Kpn0011 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NASRR2098799 Davis et al. USA 2012 human Clinical unknown infection Kpn0081 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NASRR2098788 Davis et al. USA 2012 chicken Food Food NA Kpn0021 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NASRR2098776 Davis et al. USA 2012 human Clinical unknown infection Kpn0077 KpI CG23 23 ybt clb iro iuc 1 46 ICEKp10 present 1 2 ? ?SRR2098774 Davis et al. USA 2012 turkey Food Food NA Kpn0009 KpI CG25 25 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR2098783 Davis et al. USA 2012 chicken Food Food NA Kpn0003 KpI CG34 34 - - - - NA NA NA NA NA NA NA NASRR2098761 Davis et al. USA 2012 chicken Food Food NA Kpn0022 KpI n/a 39 - - - - NA NA NA NA NA NA NA NASRR2098698 Davis et al. USA 2012 turkey Food Food NA Kpn0016 KpI n/a 44 - - - - NA NA NA NA NA NA NA NASRR2098683 Davis et al. USA 2012 turkey Food Food NA Kpn0013 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NASRR2098685 Davis et al. USA 2012 turkey Food Food NA Kpn0015 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NASRR2098687 Davis et al. USA 2012 chicken Food Food NA Kpn0029 KpI CG490 76 - - - - NA NA NA NA NA NA NA NASRR2098688 Davis et al. USA 2012 chicken Food Food NA Kpn0028 KpI CG490 76 - - - - NA NA NA NA NA NA NA NASRR2098697 Davis et al. USA 2012 chicken Food Food NA Kpn0004 KpI n/a 107 - - - - NA NA NA NA NA NA NA NASRR2098768 Davis et al. USA 2012 turkey Food Food NA Kpn0017 KpI CG111 111 - - - - NA NA NA NA NA NA NA NASRR2098797 Davis et al. USA 2012 human Clinical unknown infection Kpn0057 KpI CG133 133 - - - - NA NA NA NA NA NA NA NASRR2098787 Davis et al. USA 2012 chicken Food Food NA Kpn0002 KpI n/a 134 - - - - NA NA NA NA NA NA NA NASRR2098756 Davis et al. USA 2012 turkey Food Food NA Kpn0033 KpI CG147 147 - - - - NA NA NA NA NA NA NA NASRR2098777 Davis et al. USA 2012 chicken Food Food NA Kpn0007 KpI n/a 163 - - - - NA NA NA NA NA NA NA NASRR2098692 Davis et al. USA 2012 human Clinical unknown infection Kpn0055 KpI n/a 188 - - - - NA NA NA NA NA NA NA NASRR2098691 Davis et al. USA 2012 pork Food Food NA Kpn0036 KpI n/a 188 - - - - NA NA NA NA NA NA NA NASRR2098814 Davis et al. USA 2012 chicken Food Food NA Kpn0027 KpI n/a 220 - - - - NA NA NA NA NA NA NA NASRR2098681 Davis et al. USA 2012 human Clinical unknown infection Kpn0075 KpI CG36 268 - - - - NA NA NA NA NA NA NA NASRR2098813 Davis et al. USA 2012 human Clinical unknown infection Kpn0060 KpIII n/a 360 - - - - NA NA NA NA NA NA NA NASRR2098675 Davis et al. USA 2012 human Clinical unknown infection Kpn0079 KpI CG380 380 ybt - iro iuc 4 143 ICEKp12 present 14 NA NA NASRR2098676 Davis et al. USA 2012 human Clinical unknown infection Kpn0065 KpI CG380 380 ybt - iro iuc 4 143 ICEKp12 present 14 NA NA NASRR2098817 Davis et al. USA 2012 human Clinical unknown infection Kpn0061 KpI CG380 380 ybt - iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR2098679 Davis et al. USA 2012 human Clinical unknown infection Kpn0078 KpI CG36 433 - - - - NA NA NA NA NA NA NA NASRR2098764 Davis et al. USA 2012 turkey Food Food NA Kpn0012 KpI n/a 435 - - - iucBC NA NA NA NA NA NA NA NASRR2098766 Davis et al. USA 2012 turkey Food Food NA Kpn0014 KpI n/a 435 - - iroDN iucBC NA NA NA NA NA NA NA NASRR2098760 Davis et al. USA 2012 turkey Food Food NA Kpn0024 KpI n/a 487 - - - - NA NA NA NA NA NA NA NASRR2098710 Davis et al. USA 2012 pork Food Food NA Kpn0019 KpI CG540 540 - - - - NA NA NA NA NA NA NA NASRR2098690 Davis et al. USA 2012 turkey Food Food NA Kpn0010 KpI n/a 629 - - - - NA NA NA NA NA NA NA NASRR2098815 Davis et al. USA 2012 pork Food Food NA Kpn0044 KpIII n/a 681 - - - - NA NA NA NA NA NA NA NASRR2098696 Davis et al. USA 2012 pork Food Food NA Kpn0026 KpI n/a 870 - - - - NA NA NA NA NA NA NA NASRR2098755 Davis et al. USA 2012 human Clinical unknown infection Kpn0080 KpI CG37 896 - - - - NA NA NA NA NA NA NA NASRR2098699 Davis et al. USA 2012 turkey Food Food NA Kpn0034 KpI n/a 1010 - - - - NA NA NA NA NA NA NA NASRR2098751 Davis et al. USA 2012 turkey Food Food NA Kpn0039 KpI CG540 1013 ybt - - - ? 154 ICEKp5 present 14 NA NA NASRR2098790 Davis et al. USA 2012 pork Food Food NA Kpn0041 KpI CG17/20 1123 - - - - NA NA NA NA NA NA NA NASRR2098807 Davis et al. USA 2012 pork Food Food NA Kpn0020 KpIII n/a 1163 - - - - NA NA NA NA NA NA NA NASRR2098758 Davis et al. USA 2012 human Clinical unknown infection Kpn0074 KpI n/a 1296 - - - - NA NA NA NA NA NA NA NASRR2098801 Davis et al. USA 2012 chicken Food Food NA Kpn0040 KpIII n/a 1423 - - - - NA NA NA NA NA NA NA NASRR2098757 Davis et al. USA 2012 human Clinical unknown infection Kpn0069 KpI n/a 1540 - - - - NA NA NA NA NA NA NA NASRR2098759 Davis et al. USA 2012 turkey Food Food NA Kpn0023 KpI n/a 1613 - - - - NA NA NA NA NA NA NA NASRR2098816 Davis et al. USA 2011 human Clinical unknown infection Kpn0052 KpIII n/a 1687 - - - - NA NA NA NA NA NA NA NASRR2098809 Davis et al. USA 2012 human Clinical unknown infection Kpn0054 KpIII n/a 1688 - - - - NA NA NA NA NA NA NA NASRR2098810 Davis et al. USA 2012 human Clinical unknown infection Kpn0063 KpIII n/a 1688 - - - - NA NA NA NA NA NA NA NASRR2098762 Davis et al. USA 2012 human Clinical unknown infection Kpn0056 KpI n/a 1689 - - - - NA NA NA NA NA NA NA NASRR2098775 Davis et al. USA 2012 chicken Food Food NA Kpn0025 KpI n/a 1692 - - - - NA NA NA NA NA NA NA NASRR2098773 Davis et al. USA 2012 chicken Food Food NA Kpn0038 KpI n/a 1693 - - - - NA NA NA NA NA NA NA NASRR2098769 Davis et al. USA 2012 pork Food Food NA Kpn0030 KpI n/a 1694 - - - - NA NA NA NA NA NA NA NASRR2098770 Davis et al. USA 2012 pork Food Food NA Kpn0031 KpI n/a 1694 - - - - NA NA NA NA NA NA NA NASRR2098771 Davis et al. USA 2012 pork Food Food NA Kpn0032 KpI n/a 1694 - - - - NA NA NA NA NA NA NA NASRR2098802 Davis et al. USA 2012 chicken Food Food NA Kpn0042 KpIII n/a 1773 - - - - NA NA NA NA NA NA NA NASRR2098752 Davis et al. USA 2012 turkey Food Food NA Kpn0043 KpI n/a 1774 - - - - NA NA NA NA NA NA NA NASRR2098763 Davis et al. USA 2012 chicken Food Food NA Kpn0005 KpI n/a 1777 ybt - - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR2098753 Davis et al. USA 2012 human Clinical unknown infection Kpn0076 KpI CG37 1779 - - - - NA NA NA NA NA NA NA NASRR2098694 Davis et al. USA 2012 pork Food Food NA Kpn0018 KpI n/a 1780 - - - - NA NA NA NA NA NA NA NASRR2098778 Davis et al. USA 2012 pork Food Food NA Kpn0037 KpI CG27 5109 - - - - NA NA NA NA NA NA NA NASRR2098785 Davis et al. USA 2012 human Clinical unknown infection Kpn0070 KpI CG34 5121 - - - - NA NA NA NA NA NA NA NASRR2098811 Davis et al. USA 2011 human Clinical unknown infection Kpn0045 KpIII n/a 5122 - - - - NA NA NA NA NA NA NA NASRR2098780 Davis et al. USA 2012 human Clinical unknown infection Kpn0067 KpI n/a 5123 - - - - NA NA NA NA NA NA NA NASRR1166959 Deleo et al. USA 2009 human blood blood_sterile infection 1761_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166962 Deleo et al. USA 2009 human blood blood_sterile infection 1764_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166963 Deleo et al. USA 2009 human blood blood_sterile infection 1765_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166976 Deleo et al. USA 2010 human blood blood_sterile infection 1778_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167001 Deleo et al. USA 2010 human blood blood_sterile infection 1804_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167003 Deleo et al. USA 2010 human blood blood_sterile infection 1806_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167004 Deleo et al. USA 2010 human blood blood_sterile infection 1807_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167005 Deleo et al. USA 2010 human blood blood_sterile infection 1808_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167006 Deleo et al. USA 2010 human blood blood_sterile infection 1809_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167009 Deleo et al. USA 2011 human blood blood_sterile infection 1812_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167021 Deleo et al. USA 2012 human blood blood_sterile infection 1824_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167007 Deleo et al. USA 2011 human BAL respiratory infection 1810_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167014 Deleo et al. USA 2010 human BAL respiratory infection 1817_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166960 Deleo et al. USA 2009 human sputum respiratory infection 1762_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167016 Deleo et al. USA 2011 human sputum respiratory infection 1819_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166978 Deleo et al. USA 2010 human respiratory respiratory infection 1780_ST258 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 no noSRR1166964 Deleo et al. USA 2009 human swab unknown infection 1766_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166946 Deleo et al. USA 2004 human unknown unknown infection 1748_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166948 Deleo et al. USA 2004 human unknown unknown infection 1750_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166949 Deleo et al. USA 2005 human unknown unknown infection 1751_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166952 Deleo et al. USA 2007 human unknown unknown infection 1754_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166953 Deleo et al. USA 2007 human unknown unknown infection 1755_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166955 Deleo et al. USA 2007 human unknown unknown infection 1757_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166956 Deleo et al. USA 2007 human unknown unknown infection 1758_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166967 Deleo et al. USA 2009 human unknown unknown infection 1769_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166969 Deleo et al. USA 2010 human unknown unknown infection 1771_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166972 Deleo et al. Canada 2009 human unknown unknown infection 1774_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166974 Deleo et al. USA 2009 human unknown unknown infection 1776_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166980 Deleo et al. USA 2006 human unknown unknown infection 1782_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166981 Deleo et al. USA 2007 human unknown unknown infection 1783_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166984 Deleo et al. USA 2010 human unknown unknown infection 1786_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166986 Deleo et al. USA 2011 human unknown unknown infection 1788_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166988 Deleo et al. USA 2011 human unknown unknown infection 1790_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166991 Deleo et al. USA 2009 human unknown unknown infection 1793_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166992 Deleo et al. USA 2009 human unknown unknown infection 1794_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166993 Deleo et al. Italy 2009 human unknown unknown infection 1795_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166994 Deleo et al. USA 2010 human unknown unknown infection 1796_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166995 Deleo et al. USA 2010 human unknown unknown infection 1797_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166996 Deleo et al. USA 2010 human unknown unknown infection 1798_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166997 Deleo et al. USA 2010 human unknown unknown infection 1800_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166999 Deleo et al. USA 2011 human unknown unknown infection 1802_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167017 Deleo et al. USA 2011 human unknown unknown infection 1820_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166945 Deleo et al. USA 2003 human unknown unknown infection 1747_ST258 KpI CG258 258 ybt clb - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1166947 Deleo et al. USA 2004 human unknown unknown infection 1749_ST258 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 no noSRR1166968 Deleo et al. USA 2010 human unknown unknown infection 1770_ST258 KpI CG258 258 ybt clb - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1166971 Deleo et al. Canada 2007 human unknown unknown infection 1773_ST258 KpI CG258 258 ybt clb - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1166982 Deleo et al. USA 2008 human unknown unknown infection 1784_ST258 KpI CG258 258 ybt clb - - 3 247 ICEKp10 present 17 3 no noSRR1166983 Deleo et al. USA 2009 human unknown unknown infection 1785_ST258 KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 no noSRR1166987 Deleo et al. USA 2011 human unknown unknown infection 1789_ST258 KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 no noSRR1166998 Deleo et al. USA 2011 human unknown unknown infection 1801_ST258 KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 no noSRR1166957 Deleo et al. USA 2009 human urine urine infection 1759_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166970 Deleo et al. USA 2010 human urine urine infection 1772_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166975 Deleo et al. USA 2010 human urine urine infection NJST258_1_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166977 Deleo et al. USA 2010 human urine urine infection 1779_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166985 Deleo et al. USA 2010 human urine urine infection 1787_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167008 Deleo et al. USA 2010 human urine urine infection 1811_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167015 Deleo et al. USA 2010 human urine urine infection 1818_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1167002 Deleo et al. USA 2010 human wound wound infection 1805_ST258 KpI CG258 258 - - - - NA NA NA NA NA NA NA NASRR1166973 Deleo et al. Canada 2009 human wound wound infection 1775_ST258 KpI CG258 258 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDSRR1166958 Deleo et al. USA 2009 human sputum respiratory infection 1760_ST379 KpI CG258 379 - - - - NA NA NA NA NA NA NA NASRR1166961 Deleo et al. USA 2009 human unknown unknown infection 1763_ST379 KpI CG258 379 - - - - NA NA NA NA NA NA NA NASRR1166965 Deleo et al. USA 2009 human unknown unknown infection 1767_ST379 KpI CG258 379 - - - - NA NA NA NA NA NA NA NASRR1166966 Deleo et al. USA 2009 human unknown unknown infection 1768_ST379 KpI CG258 379 - - - - NA NA NA NA NA NA NA NASRR1166954 Deleo et al. USA 2007 human unknown unknown infection 1756_ST418 KpI CG258 418 - - - - NA NA NA NA NA NA NA NASRR1166989 Deleo et al. Colombia 2010 human unknown unknown infection 1791_ST512 KpI CG258 512 - - - - NA NA NA NA NA NA NA NASRR1166990 Deleo et al. Colombia 2010 human unknown unknown infection 1792_ST512 KpI CG258 512 - - - - NA NA NA NA NA NA NA NASRR1167022 Deleo et al. Colombia 2012 human unknown unknown infection 1825_ST512 KpI CG258 512 - - - - NA NA NA NA NA NA NA NASRR1166951 Deleo et al. USA 2006 human unknown unknown infection 1753_ST258 KpI CG258 5240 - - - - NA NA NA NA NA NA NA NASRR1166950 Deleo et al. USA 2005 human unknown unknown infection 1752_ST258 KpI CG258 5296 - - - - NA NA NA NA NA NA NA NAERR257660 Ellington et al. UK 2011 human blood blood_sterile infection unknown KpI n/a 13 ybt - - - 3 21 ICEKp4 absent 10 NA NA NAERR257636 Ellington et al. UK 2010 human hip unknown unknown unknown KpI n/a 13 ybt - - - 3 21 ICEKp4 absent 10 NA NA NAERR304789 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR314561 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR314438 Ellington et al. UK 2011 human sputum respiratory unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR257642 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257684 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR314431 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR314432 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257606 Ellington et al. UK 2006 human blood blood_sterile infection unknown KpI CG14/15 15 ybt - - - 3 104 ICEKp4 absent 10 NA NA NAERR257651 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG14/15 15 ybt - - - 3 18 ICEKp4 absent 10 NA NA NAERR257629 Ellington et al. UK 2011 human abdomen intestinal unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257653 Ellington et al. UK 2011 human abdomen intestinal unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR314417 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257645 Ellington et al. UK 2011 human tracheal aspirate respiratory unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR314441 Ellington et al. UK 2012 human screening unknown unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257605 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257692 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR257648 Ellington et al. UK 2011 human urine urine unknown unknown KpI CG14/15 15 ybt - - - 1 25 ICEKp4 absent 10 NA NA NAERR314549 Ellington et al. UK 2012 human urine urine unknown unknown KpI CG14/15 15 ybt - - - 1 19 ICEKp4 absent 10 NA NA NAERR311562 Ellington et al. UK 2011 human wound wound unknown unknown KpI CG14/15 15 ybt - - - 4 17 ICEKp4 absent 10 NA NA NAERR257617 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NAERR257622 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NAERR257630 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR304790 Ellington et al. UK 2008 human blood blood_sterile unknown unknown KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR314420 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR314519 Ellington et al. UK 2011 human sterile fluid blood_sterile unknown unknown KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR304799 Ellington et al. UK 2011 human blood blood_sterile infection unknown KpI CG17/20 17 ybt - - - 1 131 ? ? 14 NA NA NAERR304796 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG17/20 17 ybt - - - 1 131 ? ? 14 NA NA NAERR257665 Ellington et al. UK 2008 human blood blood_sterile infection unknown KpI CG23 23 ybt clb iro iuc 1 56 ICEKp10 present 1 2 no noERR314412 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI CG25 25 - - - - NA NA NA NA NA NA NA NAERR314557 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI CG25 25 - - - - NA NA NA NA NA NA NA NAERR304794 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG25 25 ybt - - - 4 62 ICEKp5 absent 6 NA NA NAERR314556 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG25 25 - - - - NA NA NA NA NA NA NA NAERR314400 Ellington et al. UK 2012 human urine urine unknown unknown KpI CG25 25 ybt - - - 4 63 ICEKp5 absent 6 NA NA NAERR257640 Ellington et al. UK 2006 human blood blood_sterile infection unknown KpI CG29 29 ybt - - - 3 148 ICEKp5 absent 14 NA NA NAERR314402 Ellington et al. UK 2012 human urine urine unknown unknown KpI CG29 29 ybt - - - 1 151 ICEKp5 absent 14 NA NA NAERR314560 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG34 34 - - - - NA NA NA NA NA NA NA NAERR257656 Ellington et al. UK 2006 human CSF blood_sterile unknown unknown KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR257638 Ellington et al. UK 2006 human blood blood_sterile infection unknown KpI CG35 35 ybt - - - 3 287 ICEKp12 present 16 NA NA NAERR257646 Ellington et al. UK 2006 human blood blood_sterile infection unknown KpI CG35 35 ybt - - - 3 287 ICEKp12 present 16 NA NA NAERR314435 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI CG35 35 ybt - - - 3 287 ICEKp12 absent 16 NA NA NAERR314415 Ellington et al. UK 2012 human urine urine unknown unknown KpI CG35 35 ybt - - - 3 303 ICEKp2 absent 13 NA NA NAERR257686 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR304793 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG45 45 ybt - - - 1 73 ICEKp4 absent 10 NA NA NAERR304800 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR314418 Ellington et al. UK 2012 human blood blood_sterile infection unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314534 Ellington et al. UK 2012 human blood blood_sterile infection unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314537 Ellington et al. UK 2012 human sterile fluid blood_sterile unknown unknown KpI ST48 48 ybt - - - 3 132 ICEKp5 absent 14 NA NA NAERR314466 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314533 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314541 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314542 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314543 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314544 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314545 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR314546 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST48 48 ybt - - - 1 189 ICEKp3 absent 9 NA NA NAERR257679 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI n/a 54 - - - - NA NA NA NA NA NA NA NAERR257621 Ellington et al. UK 2011 human hip unknown unknown unknown KpI n/a 70 ybt - - - 1 165 ICEKp9 absent 8 NA NA NAERR257613 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 70 ybt - - - 1 165 ICEKp9 absent 8 NA NA NAERR257601 Ellington et al. UK 2007 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257602 Ellington et al. UK 2008 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257603 Ellington et al. UK 2009 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257609 Ellington et al. UK 2007 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257610 Ellington et al. UK 2008 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257632 Ellington et al. UK 2006 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257633 Ellington et al. UK 2007 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257641 Ellington et al. UK 2007 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257657 Ellington et al. UK 2008 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257661 Ellington et al. UK 2011 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257664 Ellington et al. UK 2007 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257669 Ellington et al. UK 2011 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257672 Ellington et al. UK 2007 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 2/3? 183 ICEKp3 absent 9 NA NA NAERR257673 Ellington et al. UK 2008 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257674 Ellington et al. UK 2009 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257676 Ellington et al. UK 2011 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257681 Ellington et al. UK 2008 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 182 ICEKp3 absent 9 NA NA NAERR257683 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257691 Ellington et al. UK 2010 human blood blood_sterile infection unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257649 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257677 Ellington et al. UK 2011 human unknown unknown unknown unknown KpI CG43 101 ybt - - - 3 185 ICEKp3 absent 9 NA NA NAERR257680 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR257688 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NAERR314536 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI n/a 107 - - - - NA NA NA NA NA NA NA NAERR314565 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI n/a 134 - - - - NA NA NA NA NA NA NA NAERR311473 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR257685 Ellington et al. UK 2011 human ascitic fluid intestinal unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR314491 Ellington et al. UK 2011 human sputum respiratory unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR257637 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR257667 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR311475 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR311477 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR311478 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR314497 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR314515 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR314558 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR257626 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 158 - - - - NA NA NA NA NA NA NA NAERR314407 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI n/a 161 - - - - NA NA NA NA NA NA NA NAERR314555 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI n/a 161 - - - - NA NA NA NA NA NA NA NAERR257627 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpI n/a 171 - - - - NA NA NA NA NA NA NA NAERR257690 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpI n/a 171 - - - - NA NA NA NA NA NA NA NAERR314562 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI n/a 188 - - - - NA NA NA NA NA NA NA NAERR314404 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpIII n/a 203 - - - - NA NA NA NA NA NA NA NAERR314408 Ellington et al. UK 2012 human CSF blood_sterile unknown unknown KpI CG231 231 - - - - NA NA NA NA NA NA NA NAERR314522 Ellington et al. UK 2011 human sputum respiratory unknown unknown KpI CG231 231 - - - - NA NA NA NA NA NA NA NAERR311479 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG231 231 - - - - NA NA NA NA NA NA NA NAERR314523 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG231 231 - - - - NA NA NA NA NA NA NA NAERR257675 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpI CG253 253 - - - - NA NA NA NA NA NA NA NAERR314421 Ellington et al. UK 2012 human blood blood_sterile infection unknown KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NAERR304792 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpI CG36 268 - - - - NA NA NA NA NA NA NA NAERR314530 Ellington et al. UK 2012 human blood blood_sterile infection unknown KpI CG36 268 ybt - - - 4 305 ICEKp2 absent 13 NA NA NAERR314535 Ellington et al. UK 2012 human blood blood_sterile infection unknown KpI CG36 268 ybt - - - 4 305 ICEKp2 absent 13 NA NA NAERR314531 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG36 268 ybt - - - 4 305 ICEKp2 absent 13 NA NA NAERR314551 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG36 268 ybt - - - 4 305 ICEKp2 absent 13 NA NA NAERR314500 Ellington et al. UK 2012 human sterile fluid blood_sterile unknown unknown KpI n/a 280 - - - - NA NA NA NA NA NA NA NAERR314490 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 280 - - - - NA NA NA NA NA NA NA NAERR314532 Ellington et al. UK 2012 human urine urine unknown unknown KpI n/a 280 - - - - NA NA NA NA NA NA NA NAERR257620 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314465 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314525 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR311471 Ellington et al. UK 2012 human sterile fluid blood_sterile unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314505 Ellington et al. UK 2012 human sterile fluid blood_sterile unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314459 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR311470 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR311472 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314437 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314524 Ellington et al. UK unknown human unknown unknown unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314458 Ellington et al. UK 2012 human urine urine unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314547 Ellington et al. UK 2012 human urine urine unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR314442 Ellington et al. UK 2012 human urine urine unknown unknown KpI ST307 307 ybt - - - 4 173 ICEKp3 absent 9 NA NA NAERR257604 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpI CG37 309 - - - - NA NA NA NA NA NA NA NAERR314550 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpI n/a 353 ybt - - - 1 84 ICEKp4 absent 10 NA NA NAERR314538 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 353 ybt - - - 1 84 ICEKp4 absent 10 NA NA NAERR314553 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 353 ybt - - - 1 84 ICEKp4 absent 10 NA NA NAERR314554 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 353 ybt - - - 1 84 ICEKp4 absent 10 NA NA NAERR314564 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI n/a 378 - - - - NA NA NA NA NA NA NA NAERR314563 Ellington et al. UK unknown human unknown unknown unknown unknown KpI n/a 378 - - - - NA NA NA NA NA NA NA NAERR314527 Ellington et al. UK 2012 human urine urine unknown unknown KpI n/a 471 - - - - NA NA NA NA NA NA NA NAERR257611 Ellington et al. UK 2009 human blood blood_sterile infection unknown KpI CG45 485 ybt - - - 4 155 ? absent 14 NA NA NAERR314467 Ellington et al. UK 2012 human urine urine unknown unknown KpI CG45 485 - - - - NA NA NA NA NA NA NA NAERR257634 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpI n/a 551 - - - - NA NA NA NA NA NA NA NAERR257668 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI n/a 869 - - - - NA NA NA NA NA NA NA NAERR257599 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257600 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257607 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257608 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257612 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257614 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257618 Ellington et al. UK 2008 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257623 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257624 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257625 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257631 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257639 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257647 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257654 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257662 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257663 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257670 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257671 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257678 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR314506 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR314567 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257655 Ellington et al. UK unknown human unknown unknown unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR257650 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpII n/a 1031 - - - - NA NA NA NA NA NA NA NAERR311483 Ellington et al. UK 2012 human screening unknown unknown unknown KpI n/a 1193 - - - - NA NA NA NA NA NA NA NAERR257687 Ellington et al. UK 2006 human blood blood_sterile unknown unknown Recombinant? n/a 1214 - - - - NA NA NA NA NA NA NA NAERR314495 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpIII n/a 1255 - - - - NA NA NA NA NA NA NA NAERR257652 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI CG230 1307 - - - - NA NA NA NA NA NA NA NAERR304797 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI n/a 1380 - - - - NA NA NA NA NA NA NA NAERR311554 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpIII n/a 1407 - - - - NA NA NA NA NA NA NA NAERR257682 Ellington et al. UK 2009 human blood blood_sterile infection unknown KpI n/a 1408 ybt - - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR257615 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpIII n/a 1843 - - - - NA NA NA NA NA NA NA NAERR314419 Ellington et al. UK 2011 human blood blood_sterile unknown unknown KpI n/a 5006 - - - - NA NA NA NA NA NA NA NAERR314501 Ellington et al. UK 2012 human sterile fluid blood_sterile unknown unknown KpI n/a 5006 - - - - NA NA NA NA NA NA NA NAERR257628 Ellington et al. UK 2010 human abdomen intestinal unknown unknown KpI n/a 5006 - - - - NA NA NA NA NA NA NA NAERR257689 Ellington et al. UK 2008 human blood blood_sterile unknown unknown KpII n/a 5010 - - - - NA NA NA NA NA NA NA NAERR257598 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpI n/a 5011 - - - - NA NA NA NA NA NA NA NAERR257658 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpI n/a 5012 - - - - NA NA NA NA NA NA NA NAERR257666 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpI n/a 5012 - - - - NA NA NA NA NA NA NA NAERR304788 Ellington et al. UK 2007 human blood blood_sterile unknown unknown KpI n/a 5013 - - - - NA NA NA NA NA NA NA NAERR257616 Ellington et al. UK 2006 human blood blood_sterile unknown unknown KpIII n/a 5014 - - - - NA NA NA NA NA NA NA NAERR257619 Ellington et al. UK 2009 human blood blood_sterile unknown unknown KpII n/a 5015 - - - - NA NA NA NA NA NA NA NAERR257635 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpII n/a 5015 - - - - NA NA NA NA NA NA NA NAERR257643 Ellington et al. UK 2010 human blood blood_sterile unknown unknown KpII n/a 5015 - - - - NA NA NA NA NA NA NA NAERR304791 Ellington et al. UK 2008 human blood blood_sterile unknown unknown KpII n/a 5016 - - - - NA NA NA NA NA NA NA NAERR314528 Ellington et al. UK 2012 human blood blood_sterile unknown unknown KpIII n/a 5017 - - - - NA NA NA NA NA NA NA NAERR314529 Ellington et al. UK unknown human unknown unknown unknown unknown KpIII n/a 5017 - - - - NA NA NA NA NA NA NA NAERR314514 Ellington et al. UK 2012 human CSF blood_sterile unknown unknown KpII n/a 5019 - - - - NA NA NA NA NA NA NA NAERR257644 Ellington et al. UK 2010 human hip unknown unknown unknown KpI CG17/20 5020 - - - - NA NA NA NA NA NA NA NAERR314489 Ellington et al. UK 2012 human sputum respiratory unknown unknown KpIII n/a 5025 - - - - NA NA NA NA NA NA NA NAERR314520 Ellington et al. UK 2011 human sterile fluid blood_sterile unknown unknown KpI CG14/15 5026 ybt - - - 1 24 ICEKp4 absent 10 NA NA NAERR314499 Ellington et al. UK unknown human unknown unknown unknown unknown ? n/a 5030 - - - - NA NA NA NA NA NA NA NASRR5082395 Wyres et al. unknown unknown unknown unknown unknown unknown unknown KpI CG258 11 ybt - - - 1 181 ICEKp3 absent 9 NA NA NASRR5082390 Wyres et al. unknown unknown unknown unknown unknown unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NASRR5082393 Wyres et al. unknown unknown unknown unknown unknown unknown unknown KpI CG14/15 14 ybt - - - 3 105 ICEKp4 absent 10 NA NA NASRR5082384 Wyres et al. Australia unknown human unknown unknown unknown Kp25 KpI CG37 37 ybt - - - 1 10 ICEKp6 absent 5 NA NA NASRR5082396 Wyres et al. unknown unknown unknown unknown unknown unknown unknown KpI CG37 37 ybt - - - 1 10 ICEKp6 absent 5 NA NA NASRR5082388 Wyres et al. Australia unknown human unknown unknown unknown Kp20 KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082383 Wyres et al. unknown unknown unknown unknown unknown unknown unknown KpI ST48 48 - - - - NA NA NA NA NA NA NA NASRR5082400 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082391 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082382 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082403 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082401 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082386 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082389 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082392 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082394 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082397 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082399 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082385 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082387 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082402 Wyres et al. Australia unknown unknown unknown unknown unknown unknown KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NASRR5082398 Wyres et al. unknown unknown unknown unknown unknown unknown unknown KpI n/a 461 - - - - NA NA NA NA NA NA NA NAERR025496 Holt et al. Vietnam 2005 human respiratory respiratory carriage K290N KpI n/a 1 - - - - NA NA NA NA NA NA NA NAERR025547 Holt et al. Singapore 2005 human intestinal intestinal carriage DR5092/05 KpI CG258 11 - - - - NA NA NA NA NA NA NA NAERR025479 Holt et al. Vietnam 2007 human respiratory respiratory infection NCSR101 KpI CG258 11 ybt - - - 1 174 ICEKp3 absent 9 NA NA NAERR025540 Holt et al. Singapore 2004 human unknown unknown infection DM23092/04 KpI CG258 11 - - - - NA NA NA NA NA NA NA NAERR025541 Holt et al. Singapore 2005 human urine urine infection DU38032/05 KpI CG258 11 ybt - - - 1 26 ICEKp4 absent 10 NA NA NAERR025545 Holt et al. Singapore 2004 human urine urine infection DU4033/04 KpI CG258 11 ybt - - - 1 26 ICEKp4 absent 10 NA NA NAERR025548 Holt et al. Singapore 2004 human urine urine infection DU10252/04 KpI CG258 11 ybt - - - 1 26 ICEKp4 absent 10 NA NA NAERR025100 Holt et al. Australia 2002 human sterile blood_sterile infection AJ289 KpI CG14/15 14 ybt - - - 3 105 ICEKp4 absent 10 NA NA NAERR025101 Holt et al. Australia 2002 human sterile blood_sterile infection AJ290 KpI CG14/15 14 ybt - - - 3 105 ICEKp4 absent 10 NA NA NAERR025557 Holt et al. Vietnam 2004 human intestinal intestinal carriage K102An KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR024831 Holt et al. Australia 2002 human respiratory respiratory infection AJ094 KpI CG14/15 14 ybt - - - 4 178 ? absent 9 NA NA NAERR024832 Holt et al. Australia 2002 human urine urine infection AJ097 KpI CG14/15 14 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025589 Holt et al. Laos 2008 human sterile blood_sterile infection ST 752 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR025602 Holt et al. USA 2007 human intestinal biopsy intestinal unknown QMP M1-964 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR025572 Holt et al. Laos 2007 human respiratory respiratory unknown LF7160 KpI CG14/15 15 ybt - iro iuc 3 86 ICEKp4 absent 10 NA NA NAERR025550 Holt et al. Singapore 2005 human urine urine carriage DU33062/05 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR026000 Holt et al. Indonesia 2005 human urine urine unknown 2033 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR025527 Holt et al. Laos 2008 human urine urine infection U 12567 KpI CG14/15 15 ybt - - - 1 28 ICEKp4 absent 10 NA NA NAERR025546 Holt et al. Singapore 2005 human sterile blood_sterile infection DB11802/05 KpI CG17/20 17 ybt - - - 3 233 ICEKp11 present 15 NA NA NAERR025583 Holt et al. Laos 2005 human sterile blood_sterile infection UI 6717 KpI CG17/20 17 ybt - - - 4 230 ICEKp11 present 15 NA NA NAERR025501 Holt et al. Vietnam 2005 human intestinal intestinal carriage D-026-I-b-1 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR025555 Holt et al. Vietnam 2005 human respiratory respiratory carriage K262N KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NAERR025996 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1897 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR025605 Holt et al. USA 2007 human intestinal biopsy intestinal unknown QMP M1-972 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR025465 Holt et al. Vietnam 2003 human respiratory respiratory infection UV937 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR024836 Holt et al. Australia 2002 human urine urine infection AJ148 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR024840 Holt et al. Australia 2002 human urine urine infection AJ083 KpI CG17/20 20 ybt - - - 4 135 ICEKp5 ? 14 NA NA NAERR025147 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-761 KpI CG17/20 22 - - - - NA NA NA NA NA NA NA NAERR025468 Holt et al. Vietnam 2007 human sterile blood_sterile infection 07-0003m KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR025472 Holt et al. Vietnam 2009 human sterile blood_sterile infection 08-475T KpI CG23 23 ybt clb iro iuc 1 43 ICEKp10 present 1 2 no noERR025654 Holt et al. Vietnam 2008 human sterile blood_sterile infection 2358m KpI CG23 23 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025111 Holt et al. Singapore 2002 human liver liver infection DM16912/02 KpI CG23 23 ybt clb iro iuc 1 54 ICEKp10 present 1 2 no noERR025117 Holt et al. Singapore 2005 human liver liver infection DM11825/05 KpI CG23 23 ybt clb iro iuc ? 47 ICEKp10 present 1 2 ? ?ERR024843 Holt et al. Australia 2002 human unknown unknown infection AJ155 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 ? ?ERR025115 Holt et al. Singapore 2003 human unknown unknown infection DM17138/03 KpI CG23 23 ybt clb iro iuc 1 51 ICEKp10 present 1 2 no noERR025571 Holt et al. Laos 2008 human unknown unknown infection Pus 9314/2 KpI CG23 23 ybt clb iro iuc 1 46 ICEKp10 present 1 2 no noERR025576 Holt et al. Laos 2009 human pus unknown unknown Pus 15987 KpI CG23 23 ybt - iro iuc 4 326 ICEKp1 absent 2 NA NA NAERR025649 Holt et al. Vietnam 2009 human sterile blood_sterile infection 09-2985m KpI CG25 25 ybt - iro - 4 320 ICEKp1 absent 2 NA NA NAERR024822 Holt et al. Australia 2001 human unknown unknown infection AJ049 KpI n/a 30 - - - - NA NA NA NA NA NA NA NAERR025146 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-728 KpI CG34 34 - - - - NA NA NA NA NA NA NA NAERR025494 Holt et al. Vietnam 2005 human respiratory respiratory carriage K280N KpI CG34 34 - - - - NA NA NA NA NA NA NA NAERR025137 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-557 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR025566 Holt et al. Laos 2006 human intestinal intestinal infection AF 3927 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR025520 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-85-R-MAN KpI CG36 36 ybt - - - 1 237 ICEKp12 present 16 NA NA NAERR024823 Holt et al. Australia 2001 human urine urine infection AJ054 KpI CG36 36 - - - - NA NA NA NA NA NA NA NAERR025544 Holt et al. Singapore 1996 human sterile blood_sterile infection DB44834/96 KpI n/a 42 - - - - NA NA NA NA NA NA NA NAERR025485 Holt et al. Vietnam 2004 human respiratory respiratory carriage K21Sp KpI n/a 42 - - - - NA NA NA NA NA NA NA NAERR025553 Holt et al. Vietnam 2004 human respiratory respiratory carriage K86N KpI n/a 42 - - - - NA NA NA NA NA NA NA NAERR025993 Holt et al. UK 2009 mouse intestinal intestinal NA TL125 KpI n/a 42 - - - - NA NA NA NA NA NA NA NAERR025471 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-170 KpI CG43 43 - - - - NA NA NA NA NA NA NA NAERR025658 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1764 KpI CG43 43 - - iro iuc NA NA NA NA NA NA NA NAERR025659 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1765 KpI CG43 43 - - iro iuc NA NA NA NA NA NA NA NAERR025668 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1753 KpI CG43 43 - - iro iuc NA NA NA NA NA NA NA NAERR024848 Holt et al. Australia 2002 human respiratory respiratory infection AJ211 KpI CG43 43 - - - - NA NA NA NA NA NA NA NAERR024845 Holt et al. Australia 2002 human unknown unknown infection AJ205 KpI CG43 43 - - - - NA NA NA NA NA NA NA NAERR025657 Holt et al. Indonesia 2005 human urine urine unknown 1524 KpI CG43 43 - - - - NA NA NA NA NA NA NA NAERR025661 Holt et al. Indonesia 2005 human urine urine unknown 1555 KpI CG43 43 - - - - NA NA NA NA NA NA NA NAERR025118 Holt et al. Singapore 2004 human sterile blood_sterile infection DB270/04 KpI ST48 48 ybt - - - 1 193 ICEKp3 absent 9 NA NA NAERR025587 Holt et al. Laos 2007 human sterile blood_sterile infection UI 10871 KpI ST48 48 ybt - - - 1 193 ICEKp3 absent 9 NA NA NAERR025495 Holt et al. Vietnam 2005 human intestinal intestinal carriage K282Ax KpI ST48 48 ybt - - - 1 61 ICEKp3 absent 9 NA NA NAERR025104 Holt et al. Australia 2002 human urine urine infection AJ303 KpI ST48 48 ybt - - - 4 82 ICEKp4 absent 10 NA NA NAERR025108 Holt et al. Australia 2002 human urine urine infection AJ256 KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NAERR025525 Holt et al. USA 2009 monkey intestinal intestinal NA 7085 KpI n/a 60 ybt - iro - 1 324 ICEKp1 absent 2 NA NA NAERR025521 Holt et al. USA 2006 monkey unknown unknown NA KpV513 KpI n/a 60 ybt - iro - 1 324 ICEKp1 absent 2 NA NA NAERR025678 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-090 KpI CG65 65 ybt clb iro iuc 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025652 Holt et al. Vietnam 2009 human sterile blood_sterile infection 620m KpI CG65 65 ybt clb iro iuc 4 236 ICEKp10 present 17 3 no noERR025542 Holt et al. Singapore 2001 human unknown unknown infection DM1159/01 KpI CG65 65 ybt clb iro iuc 3 235 ICEKp10 present 17 3 no noERR025651 Holt et al. Vietnam 2008 human urine urine unknown 311G KpI CG65 65 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025517 Holt et al. USA 2008 sea mammal unknown unknown unknown 85997 KpI CG65 65 ybt - - iuc 4 194 ICEKp3 absent 9 NA NA NAERR024847 Holt et al. Australia 2002 human sterile blood_sterile infection AJ210 KpI CG66 66 ybt clb iro iuc ? 316 ICEKp10 present 12 1 ? ?ERR025512 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-20-R-MAC-1 KpI CG490 76 - - - - NA NA NA NA NA NA NA NAERR025645 Holt et al. Vietnam 2009 human sterile blood_sterile infection 805m KpI CG86 86 ybt - iro iuc 3 216 ICEKp3 absent 9 NA NA NAERR025523 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-228 KpI CG152 105 ybt - - - 3 276 ICEKp11 present 15 NA NA NAERR025646 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1517 KpI n/a 107 - - - - NA NA NA NA NA NA NA NAERR025519 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-68-R-MAC-1 KpI CG111 111 - - - - NA NA NA NA NA NA NA NAERR025524 Holt et al. USA 2008 monkey intestinal intestinal NA 206535 KpI CG111 111 ybt - iro 1 322 ICEKp1 absent 2 NA NA NAERR025150 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-200 KpI n/a 116 - - - - NA NA NA NA NA NA NA NAERR025574 Holt et al. Laos 2009 human respiratory respiratory infection Pus 15007 KpI CG133 133 - - - - NA NA NA NA NA NA NA NAERR025551 Holt et al. Singapore 2005 human urine urine unknown DU35427/05 KpII n/a 138 - - - - NA NA NA NA NA NA NA NAERR025498 Holt et al. Vietnam 2005 human intestinal intestinal carriage K307An KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR025648 Holt et al. Vietnam 2009 human respiratory respiratory infection 09-341B KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR025099 Holt et al. Australia 2002 human sterile blood_sterile infection AJ281 KpI CG152 152 - - - - NA NA NA NA NA NA NA NAERR025563 Holt et al. Vietnam 2005 human intestinal intestinal carriage K231An KpI n/a 176 ybt - - - 4 276 ICEKp11 present 15 NA NA NAERR025575 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-248 KpI CG37 177 - - - - NA NA NA NA NA NA NA NAERR025128 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-563 KpI n/a 178 - - - - NA NA NA NA NA NA NA NAERR025133 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-042 KpI n/a 179 - - - - NA NA NA NA NA NA NA NAERR025126 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-198 KpI n/a 180 - - - - NA NA NA NA NA NA NA NAERR025141 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-559 KpI n/a 181 - - - - NA NA NA NA NA NA NA NAERR025156 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-220 KpI n/a 183 - - - - NA NA NA NA NA NA NA NAERR025121 Holt et al. Singapore 2008 human sterile blood_sterile infection DX259/08 KpI n/a 184 - - - - NA NA NA NA NA NA NA NAERR025984 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-822 KpI n/a 185 - - - - NA NA NA NA NA NA NA NAERR025158 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-375 KpI n/a 185 - - - - NA NA NA NA NA NA NA NAERR025979 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-781 KpI n/a 186 - - - - NA NA NA NA NA NA NA NAERR025131 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-030 KpI n/a 187 - - - - NA NA NA NA NA NA NA NAERR025628 Holt et al. USA 2006 human sterile blood_sterile infection QMP M1-862 KpI n/a 188 - - - - NA NA NA NA NA NA NA NAERR025980 Holt et al. USA 2007 human urine urine infection QMP M1-886 KpI n/a 189 - - - - NA NA NA NA NA NA NA NAERR025135 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-044 KpI n/a 191 - - - - NA NA NA NA NA NA NA NAERR025999 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP Z4-716 KpI n/a 194 - - - - NA NA NA NA NA NA NA NAERR025986 Holt et al. USA 2006 human sterile blood_sterile infection QMP M1-861 KpII n/a 196 - - - - NA NA NA NA NA NA NA NAERR025114 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-481 KpIII n/a 197 - - - - NA NA NA NA NA NA NA NAERR025125 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-051 KpI n/a 198 ybt - - - 1 83 ICEKp4 absent 10 NA NA NAERR025522 Holt et al. USA 2008 monkey respiratory respiratory NA MM50237 KpI n/a 198 ybt - iro - 1 323 ICEKp1 absent 2 NA NA NAERR025160 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-378 KpI CG490 199 - - - - NA NA NA NA NA NA NA NAERR025109 Holt et al. Australia 2002 human urine urine infection AJ278 KpI n/a 200 - - - - NA NA NA NA NA NA NA NAERR025549 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-288 KpIII n/a 203 - - - - NA NA NA NA NA NA NA NAERR025120 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-340 KpIII n/a 204 - - - - NA NA NA NA NA NA NA NAERR025124 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-483 KpIII n/a 205 - - - - NA NA NA NA NA NA NA NAERR025134 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-043 KpIII n/a 207 - - - - NA NA NA NA NA NA NA NAERR025145 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-726 KpIII n/a 208 - - - - NA NA NA NA NA NA NA NAERR025148 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP M1-763 KpIII n/a 209 - - - - NA NA NA NA NA NA NA NAERR025138 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP M1-765 KpIII n/a 210 - - - - NA NA NA NA NA NA NA NAERR025157 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-222 KpI n/a 213 - - - - NA NA NA NA NA NA NA NAERR025153 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-428 KpIII n/a 214 - - - - NA NA NA NA NA NA NA NAERR025673 Holt et al. Vietnam 2008 human respiratory respiratory infection 08-049B KpI CG23 218 ybt clb iro iuc ? 60 ICEKp10 present 1 2 no noERR025677 Holt et al. Vietnam 2008 human sterile blood_sterile infection 08-0116m KpI n/a 219 ybt - - - 3 306 ICEKp2 absent 14 NA NA NAERR025510 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-223 KpI n/a 220 - - - - NA NA NA NA NA NA NA NAERR025151 Holt et al. USA 2005 environment environment environment NA QMP M1-413 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR025152 Holt et al. USA 2005 environment environment environment NA QMP M1-415 KpI n/a 221 - - - - NA NA NA NA NA NA NA NAERR025536 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-252 KpI n/a 222 - - - - NA NA NA NA NA NA NA NAERR025132 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-031 KpI CG230 224 - - - - NA NA NA NA NA NA NA NAERR025988 Holt et al. USA 2007 human urine urine infection QMP M1-882 KpI n/a 225 - - - - NA NA NA NA NA NA NA NAERR025142 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-560 KpI n/a 227 - - - - NA NA NA NA NA NA NA NAERR025143 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-561 KpI CG34 228 - - - - NA NA NA NA NA NA NA NAERR025144 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-562 KpI CG34 228 - - - - NA NA NA NA NA NA NA NAERR025985 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-826 KpI CG34 228 - - - - NA NA NA NA NA NA NA NAERR025159 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-376 KpI CG34 228 - - - - NA NA NA NA NA NA NA NAERR025607 Holt et al. USA 2005 environment environment environment NA QMP M1-407 KpI CG230 230 - - - - NA NA NA NA NA NA NA NAERR025464 Holt et al. Vietnam 2008 human sterile blood_sterile infection 08-1177m KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NAERR025469 Holt et al. Vietnam 2009 human sterile blood_sterile infection 09-0079m KpI CG231 231 ybt - - - 1 230 ICEKp11 present 15 NA NA NAERR025462 Holt et al. Vietnam 2008 human liver liver infection 59M KpI CG231 231 ybt - - iuc 1 230 ICEKp11 present 15 NA NA NAERR025473 Holt et al. Vietnam 2008 human respiratory respiratory infection 08-058D KpI CG231 231 ybt - - iuc 1 230 ICEKp11 present 15 NA NA NAERR025139 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP M1-766 KpI n/a 232 - - - - NA NA NA NA NA NA NA NAERR025154 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-217 KpI n/a 234 - - - - NA NA NA NA NA NA NA NAERR025161 Holt et al. USA 2005 environment environment environment NA QMP M1-406 KpI CG661 237 - - - - NA NA NA NA NA NA NA NAERR025625 Holt et al. USA 2006 human sterile blood_sterile infection QMP M1-776 KpI n/a 239 - - - - NA NA NA NA NA NA NA NAERR025629 Holt et al. USA 2006 human sterile blood_sterile infection QMP M1-868 KpI n/a 241 - - - - NA NA NA NA NA NA NA NAERR025113 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-344 KpI n/a 245 - - - - NA NA NA NA NA NA NA NAERR025983 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP M1-821 KpI n/a 246 - - - - NA NA NA NA NA NA NA NAERR025989 Holt et al. USA 2007 human urine urine infection QMP M1-884 KpI n/a 247 - - - - NA NA NA NA NA NA NA NAERR025981 Holt et al. USA 2007 human urine urine infection QMP M1-887 KpI n/a 249 - - - - NA NA NA NA NA NA NA NAERR025600 Holt et al. USA 2007 human urine urine infection QMP M1-896 KpI CG253 253 - - - - NA NA NA NA NA NA NA NAERR025598 Holt et al. USA 2007 human urine urine infection QMP M1-893 KpIII n/a 255 - - - - NA NA NA NA NA NA NA NAERR025588 Holt et al. USA 2006 bovine intestinal intestinal carriage QMP B2-282 KpI CG37 256 - - - - NA NA NA NA NA NA NA NAERR025531 Holt et al. Laos 2009 human urine urine infection U 13792/2 KpI CG147 273 - - - - NA NA NA NA NA NA NA NAERR025603 Holt et al. USA 2007 human intestinal biopsy intestinal unknown QMP M1-965 KpI n/a 276 - - - - NA NA NA NA NA NA NA NAERR025594 Holt et al. USA 2007 human intestinal biopsy intestinal carriage QMP M1-968 KpI n/a 278 - - - - NA NA NA NA NA NA NA NAERR025609 Holt et al. USA 2007 human intestinal biopsy intestinal carriage QMP M1-974 KpI n/a 280 - - - - NA NA NA NA NA NA NA NAERR025611 Holt et al. USA 2007 human intestinal biopsy intestinal infection QMP M1-977 KpII n/a 283 - - - - NA NA NA NA NA NA NA NAERR025615 Holt et al. USA 2007 bovine intestinal intestinal carriage QMP M2-389 KpI n/a 289 - - - - NA NA NA NA NA NA NA NAERR024839 Holt et al. Australia 2002 human urine urine infection AJ082 KpI n/a 290 - - - - NA NA NA NA NA NA NA NAERR024835 Holt et al. Australia 2002 human respiratory respiratory infection AJ146 KpI n/a 292 - - - - NA NA NA NA NA NA NA NAERR025622 Holt et al. USA 2007 bovine intestinal intestinal carriage QMP M2-488 KpI n/a 294 - - - - NA NA NA NA NA NA NA NAERR024833 Holt et al. Australia 2002 human unknown unknown infection AJ099 KpI n/a 294 - - - - NA NA NA NA NA NA NA NAERR025624 Holt et al. USA 2007 bovine intestinal intestinal carriage QMP M2-654 KpI n/a 295 - - - - NA NA NA NA NA NA NA NAERR025627 Holt et al. USA 2007 bovine intestinal intestinal carriage QMP M2-684 KpI CG36 298 - - - - NA NA NA NA NA NA NA NAERR025660 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1789 KpI n/a 300 - - - - NA NA NA NA NA NA NA NAERR025562 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-211 KpI CG37 309 - - - - NA NA NA NA NA NA NA NAERR025675 Holt et al. Vietnam 2008 human sterile blood_sterile infection 08-0345m KpI CG37 309 - - - - NA NA NA NA NA NA NA NAERR024844 Holt et al. Australia 2002 human respiratory respiratory infection AJ196 KpI n/a 310 - - - - NA NA NA NA NA NA NA NAERR025503 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-33-R-MAC-2 KpI n/a 327 - - - - NA NA NA NA NA NA NA NAERR025488 Holt et al. Vietnam 2005 human intestinal intestinal infection K268An KpII n/a 334 - - - - NA NA NA NA NA NA NA NAERR025564 Holt et al. Vietnam 2005 human intestinal intestinal carriage K242An KpI CG258 395 - - - - NA NA NA NA NA NA NA NAERR025554 Holt et al. Vietnam 2005 human intestinal intestinal carriage K261An KpI n/a 399 - - - - NA NA NA NA NA NA NA NAERR025477 Holt et al. Vietnam 2004 human respiratory respiratory carriage K53N KpI n/a 416 - - - - NA NA NA NA NA NA NA NAERR025486 Holt et al. Vietnam 2004 human respiratory respiratory carriage K35N KpI n/a 416 - - - - NA NA NA NA NA NA NA NAERR025475 Holt et al. Vietnam 2004 human respiratory respiratory infection UV1172 KpI n/a 416 - - - - NA NA NA NA NA NA NA NAERR025620 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP Z4-702 KpI n/a 442 - - - - NA NA NA NA NA NA NA NAERR025997 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1993 KpI n/a 482 - - - - NA NA NA NA NA NA NA NAERR025663 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1576 KpI CG490 495 - - - - NA NA NA NA NA NA NA NAERR025662 Holt et al. Indonesia 2005 human urine urine unknown 1557 KpI CG490 495 - - - - NA NA NA NA NA NA NA NAERR025680 Holt et al. Vietnam 2009 human urine urine unknown 09-286G KpI n/a 499 ybt - - - 4 219 ICEKp3 absent 9 NA NA NAERR025579 Holt et al. Laos 2005 human sterile blood_sterile infection UI 6167 KpI n/a 515 - - - - NA NA NA NA NA NA NA NAERR025995 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1896 KpI n/a 520 - - - - NA NA NA NA NA NA NA NAERR025532 Holt et al. Laos 2009 human urine urine infection U 16821 KpI n/a 530 - - - - NA NA NA NA NA NA NA NAERR025558 Holt et al. Vietnam 2004 human respiratory respiratory carriage K113N KpI CG540 540 - - - - NA NA NA NA NA NA NA NAERR025482 Holt et al. Vietnam 2007 human respiratory respiratory infection UV1625 KpI CG540 540 - - - - NA NA NA NA NA NA NA NAERR025534 Holt et al. Laos 2000 human sterile blood_sterile infection UI 522 KpI n/a 587 - - - - NA NA NA NA NA NA NA NAERR025635 Holt et al. Vietnam 2009 human sterile blood_sterile infection 09-2503m KpI CG34 592 - - iro iuc NA NA NA NA NA NA NA NAERR025484 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP B2-176 KpI n/a 610 ybt - - - 3 209 ICEKp3 absent 9 NA NA NAERR025621 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP Z4-724 KpI n/a 629 - - - - NA NA NA NA NA NA NA NAERR025679 Holt et al. Vietnam 2007 human respiratory respiratory infection 71B KpI n/a 656 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025655 Holt et al. Vietnam 2009 human sterile blood_sterile infection 558m KpI n/a 660 ybt - iro iuc 1 5 ICEKp6 absent 5 NA NA NAERR024826 Holt et al. Australia 2001 human respiratory respiratory unknown AJ026 KpIII n/a 695 - - - - NA NA NA NA NA NA NA NAERR024853 Holt et al. Australia 2002 human urine urine unknown AJ182 KpIII n/a 695 - - - - NA NA NA NA NA NA NA NAERR025994 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1884 KpI CG14/15 709 ybt - - - 1 105 ICEKp4 absent 10 NA NA NAERR025122 Holt et al. Singapore 2008 environment environment environment NA DR85/08 KpII n/a 734 - - - - NA NA NA NA NA NA NA NAERR025570 Holt et al. Laos 2007 human respiratory respiratory infection Pus 4878 KpI n/a 791 ybt - - - 4 145 ICEKp5 present 14 NA NA NAERR025990 Holt et al. USA 2007 human urine urine infection QMP M1-885 KpI n/a 793 - - - - NA NA NA NA NA NA NA NAERR025674 Holt et al. Vietnam 2008 human liver liver infection 71M KpI n/a 806 ybt - iro - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025638 Holt et al. Vietnam 2009 human sterile blood_sterile infection 09-2006m KpI n/a 828 ybt - iro iuc 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025116 Holt et al. Singapore 2004 human respiratory respiratory infection DM17337/04 KpI n/a 828 ybt - iro iuc 4 274 ? present 15 NA NA NAERR025633 Holt et al. Vietnam 2009 human respiratory respiratory infection 09-332B KpI n/a 967 - - - - NA NA NA NA NA NA NA NAERR024819 Holt et al. Australia 2001 human urine urine infection AJ034 KpI CG29 1109 - - - - NA NA NA NA NA NA NA NAERR024821 Holt et al. Australia 2001 human urine urine infection AJ048 KpI CG29 1109 - - - - NA NA NA NA NA NA NA NAERR024838 Holt et al. Australia 2001 human urine urine infection AJ064 KpI CG29 1109 - - - - NA NA NA NA NA NA NA NAERR025538 Holt et al. Laos 2003 human sterile blood_sterile infection UI 3324 KpI CG231 1190 - - - - NA NA NA NA NA NA NA NAERR025561 Holt et al. Vietnam 2005 human intestinal intestinal carriage K228An KpI n/a 1269 - - - - NA NA NA NA NA NA NA NAERR025998 Holt et al. Indonesia 2005 human sterile blood_sterile infection 2024 KpI n/a 1411 - - - - NA NA NA NA NA NA NA NAERR024850 Holt et al. Australia 2002 human respiratory respiratory infection AJ156 KpI CG34 1454 - - - - NA NA NA NA NA NA NA NAERR025107 Holt et al. Australia 2002 human urine urine infection AJ229 KpI n/a 1777 - - - - NA NA NA NA NA NA NA NAERR024852 Holt et al. Australia 2002 human sterile blood_sterile infection AJ170 KpI CG37 1779 - - - - NA NA NA NA NA NA NA NAERR025490 Holt et al. Vietnam 2005 human intestinal intestinal infection C-017-I-a-1 KpII n/a 1795 - - - - NA NA NA NA NA NA NA NAERR025507 Holt et al. Vietnam 2007 human intestinal intestinal infection 033-CAZ-1 KpII n/a 1822 - - - - NA NA NA NA NA NA NA NAERR025586 Holt et al. Laos 2007 human sterile blood_sterile NA UI 9552 KpII n/a 1887 - - - - NA NA NA NA NA NA NA NAERR025535 Holt et al. Laos 2002 human sterile blood_sterile infection UI 2213 KpI CG35 1948 ybt - - iuc 1 171 ICEKp3 absent 9 NA NA NAERR024834 Holt et al. Australia 2002 human respiratory respiratory unknown AJ135 KpIII n/a 1980 - - - - NA NA NA NA NA NA NA NAERR025543 Holt et al. Singapore 2002 human sterile blood_sterile infection DR19891/02 KpI CG66 2039 ybt clb iro iuc 3 41 ICEKp10 present 12 1 yes noERR025478 Holt et al. Vietnam 2004 human intestinal intestinal carriage K77An KpI n/a 2054 - - - - NA NA NA NA NA NA NA NAERR025483 Holt et al. Vietnam 2007 human respiratory respiratory infection UV1714 KpI n/a 2054 - - - - NA NA NA NA NA NA NA NAERR025515 Holt et al. USA 2008 human liver liver infection Kp-Miami KpI CG66 2058 ybt clb iro iuc 1 317 ICEKp10 present 12 1 no noERR025505 Holt et al. Vietnam 2007 human intestinal intestinal carriage 015-CN-2 KpI n/a 2108 - - - - NA NA NA NA NA NA NA NAERR025509 Holt et al. Vietnam 2007 human intestinal intestinal infection 073-CN-2 KpII n/a 2109 - - - - NA NA NA NA NA NA NA NAERR026001 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1522 KpI n/a 2110 - - - - NA NA NA NA NA NA NA NAERR025664 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1585 KpI n/a 2112 - - - - NA NA NA NA NA NA NA NAERR025665 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1586 KpI n/a 2112 - - - - NA NA NA NA NA NA NA NAERR025992 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1824 KpI CG661 2113 - - - - NA NA NA NA NA NA NA NAERR025463 Holt et al. Vietnam 2008 human sterile blood_sterile NA 1892m KpIII n/a 2114 - - - - NA NA NA NA NA NA NA NAERR025499 Holt et al. Vietnam 2005 human intestinal intestinal carriage A-003-I-a-1 KpI n/a 2115 - - - - NA NA NA NA NA NA NA NAERR024824 Holt et al. Australia 2001 human sterile blood_sterile infection AJ006 KpI CG253 2116 - - - - NA NA NA NA NA NA NA NAERR024827 Holt et al. Australia 2001 human sterile blood_sterile NA AJ027 KpIII n/a 2117 - - - - NA NA NA NA NA NA NA NAERR024828 Holt et al. Australia 2001 human urine urine infection AJ031 KpI n/a 2118 - - - - NA NA NA NA NA NA NA NAERR024830 Holt et al. Australia 2001 human urine urine unknown AJ055 KpII n/a 2119 - - - - NA NA NA NA NA NA NA NAERR025098 Holt et al. Australia 2002 human sterile blood_sterile infection AJ214 KpI n/a 2120 - - - - NA NA NA NA NA NA NA NAERR025105 Holt et al. Australia 2002 human urine urine infection AJ218 KpI n/a 2121 - - - - NA NA NA NA NA NA NA NAERR025102 Holt et al. Australia 2002 human sterile blood_sterile NA AJ292 KpIII n/a 2122 - - - - NA NA NA NA NA NA NA NAERR025103 Holt et al. Australia 2002 human sterile blood_sterile infection AJ299 KpI n/a 2123 - - - - NA NA NA NA NA NA NA NAERR025489 Holt et al. Vietnam 2005 human intestinal intestinal carriage B-013-I-a-2 KpI n/a 2124 - - - - NA NA NA NA NA NA NA NAERR025556 Holt et al. Vietnam 2005 human intestinal intestinal infection K263An KpII n/a 2125 - - - - NA NA NA NA NA NA NA NAERR025481 Holt et al. Vietnam 2009 human respiratory respiratory unknown BAL073 KpII n/a 2125 - - - - NA NA NA NA NA NA NA NAERR025491 Holt et al. Vietnam 2005 human intestinal intestinal carriage D-022-I-b-1 KpI n/a 2126 - - - - NA NA NA NA NA NA NA NAERR025112 Holt et al. Singapore 2008 human urine urine infection DU46543/08 KpI CG133 2127 - - - - NA NA NA NA NA NA NA NAERR025511 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-20-R-MAG-1 KpI n/a 2128 - - - - NA NA NA NA NA NA NA NAERR025502 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-29-R-MAG KpI n/a 2129 - - - - NA NA NA NA NA NA NA NAERR025504 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-44-R-MAG-1 KpI CG36 2130 - - - - NA NA NA NA NA NA NA NAERR025514 Holt et al. Vietnam 2006 human intestinal intestinal infection EW-60-R-MAG-2 KpII n/a 2131 - - - - NA NA NA NA NA NA NA NAERR025518 Holt et al. Vietnam 2006 human intestinal intestinal carriage EW-67-R-MAC KpI n/a 2132 - - - - NA NA NA NA NA NA NA NAERR025559 Holt et al. Vietnam 2005 human intestinal intestinal infection K215Ax KpII n/a 2133 - - - - NA NA NA NA NA NA NA NAERR025560 Holt et al. Vietnam 2005 human unknown unknown NA K222Ca KpII n/a 2133 - - - - NA NA NA NA NA NA NA NAERR025497 Holt et al. Vietnam 2005 human respiratory respiratory carriage K296N KpI n/a 2136 - - - - NA NA NA NA NA NA NA NAERR025476 Holt et al. Vietnam 2004 human intestinal intestinal infection K38An KpII n/a 2137 - - - - NA NA NA NA NA NA NA NAERR025480 Holt et al. Vietnam 2007 human respiratory respiratory unknown NCSR130 KpII n/a 2138 - - - - NA NA NA NA NA NA NA NAERR025573 Holt et al. Laos 2009 human sterile blood_sterile infection Pus 13542 KpIII n/a 2139 - - - - NA NA NA NA NA NA NA NAERR025155 Holt et al. USA 2005 bovine sterile blood_sterile infection QMP M1-218 KpI n/a 2140 - - - - NA NA NA NA NA NA NA NAERR025140 Holt et al. USA 2006 human sterile blood_sterile infection QMP M1-771 KpI CG34 2141 - - - - NA NA NA NA NA NA NA NAERR025581 Holt et al. Laos unknown human sterile blood_sterile infection UI 14245 KpI n/a 2142 - - - - NA NA NA NA NA NA NA NAERR025537 Holt et al. Laos 2002 human sterile blood_sterile NA UI 2877 KpII n/a 2143 - - - - NA NA NA NA NA NA NA NAERR025528 Holt et al. Laos 2003 human sterile blood_sterile NA UI 4256 KpII n/a 2144 - - - - NA NA NA NA NA NA NA NAERR025585 Holt et al. Laos 2006 human sterile blood_sterile infection UI 8601 KpI n/a 2145 - - - - NA NA NA NA NA NA NA NAERR025612 Holt et al. USA 2007 human intestinal biopsy intestinal unknown QMP M1-980 KpI n/a 5002 - - - - NA NA NA NA NA NA NA NAERR025593 Holt et al. USA 2007 human intestinal biopsy intestinal unknown QMP M1-967 KpI n/a 5003 - - - - NA NA NA NA NA NA NA NAERR025671 Holt et al. Vietnam 2008 human sterile blood_sterile NA 08-109P KpIII n/a 5104 - - - - NA NA NA NA NA NA NA NAERR025584 Holt et al. Laos 2006 human sterile blood_sterile NA UI 7631 KpII n/a 5105 - - - - NA NA NA NA NA NA NA NAERR025608 Holt et al. USA 2005 environment environment environment NA QMP M1-418 KpI n/a 5106 - - - - NA NA NA NA NA NA NA NAERR025614 Holt et al. USA 2005 environment environment environment NA QMP M1-414 KpI CG322 5107 - - - - NA NA NA NA NA NA NA NAERR025676 Holt et al. Vietnam 2008 human liver liver infection 24m KpI CG25 5124 ybt - iro - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR024837 Holt et al. Australia 2001 human respiratory respiratory infection AJ056 KpI n/a 5134 ybt - - - plasmid 30 plasmid absent 4 NA NA NAERR025644 Holt et al. Vietnam 2009 human sterile blood_sterile infection 09-2801m KpI n/a 5135 ybt - iro - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025470 Holt et al. Vietnam 2007 human sterile blood_sterile infection 07-2034m KpI n/a 5136 ybt clb iro iuc 1 46 ICEKp10 present 1 2 no? no?ERR025582 Holt et al. Laos 2009 human sterile blood_sterile infection UI 15398 KpI CG34 5137 - - iro iuc NA NA NA NA NA NA NA NAERR025596 Holt et al. USA 2007 human urine urine infection QMP M1-891 KpI CG45 5138 ybt - - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR024851 Holt et al. Australia 2002 human urine urine infection AJ158 KpI n/a 5141 - - - - NA NA NA NA NA NA NA NAERR025982 Holt et al. USA 2007 human urine urine infection QMP M1-888 KpIII n/a 5142 - - - - NA NA NA NA NA NA NA NAERR025631 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP Z4-726 KpII n/a 5183 - - - - NA NA NA NA NA NA NA NAERR025666 Holt et al. USA 2006 bovine sterile blood_sterile infection QMP Z4-712 KpI n/a 5184 - - - - NA NA NA NA NA NA NA NAERR024818 Holt et al. Australia 2001 human respiratory respiratory infection AJ033 KpI n/a 5219 - - - - NA NA NA NA NA NA NA NAERR025641 Holt et al. Vietnam 2009 human sterile blood_sterile infection 09-2072m KpI n/a 5220 - - - - NA NA NA NA NA NA NA NAERR024854 Holt et al. Australia 2002 human urine urine infection AJ188 KpI n/a 5221 - - - - NA NA NA NA NA NA NA NAERR025647 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1523 KpI n/a 5228 - - - - NA NA NA NA NA NA NA NAERR025667 Holt et al. Indonesia 2005 human sterile blood_sterile infection 1612 KpI CG36 5229 ybt clb iro iuc 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR025601 Holt et al. USA 2007 human intestinal biopsy intestinal carriage QMP M1-963 KpI n/a 5263 - - - - NA NA NA NA NA NA NA NAERR025613 Holt et al. USA 2005 bovine intestinal intestinal carriage QMP M1-029 KpI n/a 5264 - - - - NA NA NA NA NA NA NA NAERR025610 Holt et al. USA 2007 human intestinal biopsy intestinal carriage QMP M1-975 KpI n/a 5297 - - - - NA NA NA NA NA NA NA NAERR025618 Holt et al. USA 2007 bovine intestinal intestinal carriage QMP M2-484 KpI n/a 5298 - - - - NA NA NA NA NA NA NA NASRR5082370 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH29 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NASRR5082371 Lee et al. Singapore 2013-2015 human liver liver infection NUH24 KpI CG23 23 - clb iro iuc NA NA ICEKp10*-ybt present NA 2 no noSRR5082373 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH01 KpI CG23 23 ybt clb iro iuc 1 48 ICEKp10 present 1 2 no noSRR5082380 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH02 KpI CG23 23 ybt clb iro iuc 1 45 ICEKp10 present 1 2 no noSRR5082361 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH15 KpI CG23 23 ybt clb iro iuc 1 52 ICEKp10 present 1 2 no noSRR5082364 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH16 KpI CG23 23 ybt clb iro iuc 1 52 ICEKp10 present 1 2 no noSRR5082367 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH17 KpI CG23 23 ybt clb iro iuc 1 44 ICEKp10 present 1 2 ? ?SRR5082369 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH19 KpI CG23 23 ybt - iro iuc 1 170 ICEKp3 absent 8 NA NA NASRR5082362 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH23 KpI CG23 23 ybt - iro iuc 1 169 ICEKp3 absent 8 NA NA NASRR5082377 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH27 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noSRR5082378 Lee et al. Singapore 2013-2015 human liver abscess liver infection SGH05 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noSRR5082357 Lee et al. Singapore 2013-2015 human liver abscess liver infection SGH10 KpI CG23 23 ybt clb iro iuc 1 53 ICEKp10 present 1 2 no noSRR5082363 Lee et al. Singapore 2013-2015 human liver abscess liver infection SGH07 KpI n/a 60 ybt - iro - 3 324 ICEKp1 absent 2 NA NA NASRR5082368 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH03 KpI CG65 65 ybt clb iro iuc 2/4? 234 ICEKp10 present 17 3 no noSRR5082366 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH36 KpI CG111 111 ybt - iro - plasmid 65 plasmid absent 4 NA NA NASRR5082358 Lee et al. Singapore 2013-2015 human liver abscess liver infection TTSH0 KpI CG86 373 ybt - iro - 3 202 ICEKp3 absent 9 NA NA NASRR5082356 Lee et al. Singapore 2013-2015 human liver abscess liver infection TTSH1 KpI CG380 380 - - iro iuc NA NA NA NA NA NA NA NASRR5082372 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH11 KpI n/a 399 - - - - NA NA NA NA NA NA NA NASRR5082365 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH28 KpI CG34 592 - - iro iuc NA NA NA NA NA NA NA NASRR5082360 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH09 KpI n/a 660 ybt - iro iuc 1 9 ICEKp6 absent 5 NA NA NASRR5082381 Lee et al. Singapore 2013-2015 human liver abscess liver infection TTSH1 KpI n/a 828 ybt - iro iuc 4 274 ? present 15 NA NA NASRR5082374 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH08 KpI CG23 887 ybt clb iro iuc 1 46 ICEKp10 present 1 2 no noSRR5082359 Lee et al. Singapore 2013-2015 human liver abscess liver infection SGH04 KpI CG23 887 ybt clb iro iuc 1 159 ICEKp10 present 1 2 no noSRR5082376 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH26 KpI n/a 1049 ybt - iro iuc ? 8 ? absent 5 NA NA NASRR5082375 Lee et al. Singapore 2013-2015 human liver abscess liver infection TTSH0 KpII n/a 2037 - - - - NA NA NA NA NA NA NA NASRR5082379 Lee et al. Singapore 2013-2015 human liver abscess liver infection NUH04 KpI CG66 2039 ybt clb iro iuc 3 42 ICEKp10 present 12 1 yes noNCTC5056 NCTC unknown 1934 human pneumonia respiratory infection F 10 KpI CG3 3 ybt clb - - 4 128 ICEKp10 present 12 1 no noNCTC8849 NCTC UK 1951 human respiratory respiratory unknown Leather 15369/51 KpI CG3 3 ybt clb - iuc 4 127 ICEKp10 present 12 1 yes noNCTC10246 NCTC USA 1948 unknown unknown unknown unknown AMC 35-A-3 KpI CG3 3 ybt clb - - 4 128 ICEKp10 present 12 1 no noNCTC204 NCTC UK 1920 unknown unknown unknown unknown Lister KpI CG3 3 ybt clb - - 4 129 ICEKp10 present 12 1 no noNCTC9632 NCTC USA 1955 unknown unknown unknown unknown 3031/49 KpI CG3 3 ybt clb - iuc 4 126 ICEKp10 present 12 1 no noNCTC9635 NCTC USA 1955 unknown unknown unknown unknown 985/53 KpI CG3 3 ybt clb - iuc 4 126 ICEKp10 present 12 1 no noNCTC9637 NCTC USA 1955 unknown unknown unknown unknown 3272/53 KpI CG3 3 ybt clb - iuc 4 130 ICEKp10 present 12 1 no noNCTC11682 NCTC unknown unknown unknown unknown unknown unknown P13 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NANCTC13443 NCTC UK 2009 unknown unknown unknown unknown CCUG 68728 KpI CG14/15 14 ybt - - - 1 140 ICEKp5 absent 14 NA NA NANCTC9494 NCTC USA 1954 human sputum respiratory infection 4428-53 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NANCTC9127 NCTC USA 1933 food ice cream Food NA Strain 99 (NCTC4140) KpI CG29 29 - - - - NA NA NA NA NA NA NA NANCTC9504 NCTC USA 1954 human post-operative infection post-operative infection infection 367-54 KpI CG29 29 - - - - NA NA NA NA NA NA NA NANCTC11692 NCTC unknown unknown unknown unknown unknown unknown I8 KpI CG29 29 - - - - NA NA NA NA NA NA NA NANCTC11687 NCTC unknown unknown unknown unknown unknown unknown I3 KpI CG34 34 - - - - NA NA NA NA NA NA NA NANCTC11675 NCTC unknown unknown unknown unknown unknown unknown P2 KpI CG35 35 - - - iuc NA NA NA NA NA NA NA NANCTC11688 NCTC unknown unknown unknown unknown unknown unknown I4 KpI CG35 35 - - - - NA NA NA NA NA NA NA NANCTC11674 NCTC unknown 1979 unknown unknown unknown unknown unknown KpI ST48 48 ybt clb - - 3 289 ICEKp10 present 17 3 no noNCTC11680 NCTC unknown unknown unknown unknown unknown unknown P11 KpI ST48 48 ybt - - - 4 81 ICEKp4 absent 10 NA NA NANCTC13439 NCTC Italy 2006 unknown unknown unknown unknown unknown KpI n/a 54 - - - - NA NA NA NA NA NA NA NANCTC9660 NCTC USA 1955 unknown unknown unknown unknown 1352/53 KpI n/a 60 ybt - iro - 3/1? 323 ICEKp1 absent 2 NA NA NANCTC1936 NCTC Indonesia 1925 human nose respiratory infection ATCC 6908 KpI n/a 67 ybt - iroC iuc 1 310 ICE_rhino present 11 NA NA NANCTC5046 NCTC Indonesia 1934 human nose respiratory infection ATCC 13884 KpI n/a 67 ybt - iroC iuc 1 307 ICE_rhino present 11 NA NA NANCTC7799 NCTC UK 1948 human nose respiratory infection BSI 36208 KpI n/a 67 ybt - iroC iuc 1 308 ICE_rhino present 11 NA NA NANCTC5047 NCTC Indonesia 1934 human nose respiratory unknown R 73 KpI n/a 67 ybt - - iuc 1 311 ICE_rhino present 11 NA NA NANCTC11679 NCTC unknown unknown unknown unknown unknown unknown P10 KpI CG490 76 - - - - NA NA NA NA NA NA NA NANCTC8839 NCTC unknown 1951 human sputum respiratory infection Z 9969 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NANCTC5054 NCTC unknown 1937 human pnuemonia respiratory unknown ATCC 13886 KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NANCTC10213 NCTC USA 1960 human throat throat carriage CDC 1548-58 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NANCTC12463 NCTC unknown unknown unknown unknown unknown unknown M162 KpI ST82 82 - - iroD iuc NA NA NA NA NA NA NA NANCTC5057 NCTC unknown 1934 unknown unknown unknown unknown F1 A KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NANCTC13635 NCTC unknown unknown cow's milk cow's milk "dairy product, cow's milk" unknown ATCC 4352 KpI CG86 86 ybt - - - 3 218 ICEKp3 absent 9 NA NA NANCTC9128 NCTC unknown unknown human urine urine unknown KLEB 1015 KpI CG86 86 - - iro iuc NA NA NA NA NA NA NA NANCTC7427 NCTC unknown 1948 unknown unknown unknown unknown ATCC 10031 KpI CG86 86 ybt - - - 3 217 ICEKp3 absent 9 NA NA NANCTC9662 NCTC USA 1955 human sputum respiratory infection 1289/54 KpI CG90 91 - - iroCD iuc NA NA NA NA NA NA NA NANCTC8883 NCTC unknown 1952 human sputum respiratory unknown Ipswich 932 KpI CG90 91 ybt - - iuc 1 319 ICEKp4 present 10 NA NA NANCTC9661 NCTC USA 1955 human sputum respiratory unknown 4099/53 KpI CG90 91 ybt - iroD iuc 1 296 ICEKp12 present 16 NA NA NANCTC5050 NCTC Indonesia 1931 human nose unknown unknown O3 KpI CG90 91 ybt - - iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDNCTC10313 NCTC unknown unknown unknown unknown unknown unknown 3828 KpI CG90 91 ybt - - iuc 1 101 ICEKp4 present 10 NA NA NANCTC5052 NCTC Netherlands 1934 unknown unknown unknown unknown ATCC 11298 KpI CG90 91 ybt - - iuc 4 115 ICEKp12 present 10 NA NA NANCTC5053 NCTC unknown 1934 unknown unknown unknown unknown O 45 KpI CG90 91 ybt - iroCD iuc 1 286 ICEKp12 present 16 NA NA NANCTC9657 NCTC unknown 1955 unknown respiratory tract respiratory unknown ATCC 13885 KpI CG90 93 ybt - - iuc 4 75 ICEKp4 absent 10 NA NA NANCTC10004 NCTC USA 1958 human urine urine unknown K 390 KpI n/a 116 - - - - NA NA NA NA NA NA NA NANCTC11684 NCTC unknown unknown unknown unknown unknown unknown P15 KpI n/a 150 - - - - NA NA NA NA NA NA NA NANCTC9132 NCTC Denmark 1952 human urine urine unknown KLEB 313 KpI n/a 163 - - - - NA NA NA NA NA NA NA NANCTC11693 NCTC unknown unknown unknown unknown unknown unknown I9 KpI n/a 215 - - - - NA NA NA NA NA NA NA NANCTC13438 NCTC UK 2007 unknown unknown unknown unknown unknown KpI CG258 258 - - - - NA NA NA NA NA NA NA NANCTC11676 NCTC unknown unknown unknown unknown unknown unknown P5 KpI n/a 290 - - - iuc NA NA NA NA NA NA NA NANCTC9130 NCTC Denmark 1952 human urine urine unknown KLEB 919 KpI n/a 297 - - - - NA NA NA NA NA NA NA NANCTC11698 NCTC unknown unknown unknown unknown unknown unknown I14 KpI n/a 321 - - - - NA NA NA NA NA NA NA NANCTC9137 NCTC Denmark 1952 human urine urine unknown 2005/49 KpI CG322 322 - - - - NA NA NA NA NA NA NA NANCTC11678 NCTC unknown unknown unknown unknown unknown unknown 11678P711691 or I7 KpI CG322 322 - - - - NA NA NA NA NA NA NA NANCTC13442 NCTC unknown unknown unknown unknown unknown unknown CCUG 68727 KpI n/a 353 ybt - - - 1 85 ICEKp4 absent 10 NA NA NANCTC11228 NCTC unknown unknown unknown unknown unknown unknown ATCC 29665 KpI CG65 375 - - - - NA NA NA NA NA NA NA NANCTC8895 NCTC unknown 1952 human sputum respiratory unknown IPSWICH 1867 KpI CG90 381 ybt - - iuc 1 76 ? present 10 NA NA NANCTC9601 NCTC UK 1954 unknown nose respiratory unknown Poynter KpI CG90 381 ybt - - iuc 1 77 ? present 10 NA NA NANCTC9143 NCTC Denmark 1952 human urine urine unknown 2813/50 KpI n/a 416 ybt clb - - 4 289 ICEKp10 present 17 3 no yes - clbBNCTC9140 NCTC Denmark 1952 human urine urine unknown 889/50 KpI CG133 420 - - - - NA NA NA NA NA NA NA NANCTC13368 NCTC USA 1994 unknown unknown unknown unknown ATCC 700603 KpII n/a 489 - - - - NA NA NA NA NA NA NA NANCTC9135 NCTC Denmark 1951 human diarrhoea diarrhoea infection MICH 61 KpI n/a 502 ybt - - - 4 133 ICEKp5 absent 14 NA NA NANCTC9133 NCTC Denmark 1952 human urine urine unknown KLEB 1470 KpI CG540 504 - - - - NA NA NA NA NA NA NA NANCTC8172 NCTC UK 1950 food butter Food NA C 37 KpI n/a 505 - - - - NA NA NA NA NA NA NA NANCTC11359 NCTC unknown 1954 unknown unknown unknown unknown 3454 KpI n/a 507 - - - - NA NA NA NA NA NA NA NANCTC9129 NCTC Denmark 1952 human urine urine unknown KLEB 56 KpI n/a 560 - - - - NA NA NA NA NA NA NA NANCTC9136 NCTC Denmark 1952 human surgical incision drainage sterile site unknown 2069/49 KpI n/a 561 - - - - NA NA NA NA NA NA NA NANCTC9138 NCTC Denmark 1952 human bronchial washings respiratory unknown 1754/49 KpI n/a 562 ybt - - - 4 135 ICEKp5 absent 14 NA NA NANCTC9139 NCTC Denmark 1952 human heart valve sterile site infection 293/50 KpI n/a 563 - - - - NA NA NA NA NA NA NA NANCTC13440 NCTC unknown unknown unknown unknown unknown unknown unknown KpI n/a 584 - - - - NA NA NA NA NA NA NA NANCTC11689 NCTC unknown unknown unknown unknown unknown unknown I5 KpI n/a 664 - - - - NA NA NA NA NA NA NA NANCTC9656 NCTC USA 1955 bovine mastitis unknown unknown 4045/53 KpI CG111 692 - - - - NA NA NA NA NA NA NA NANCTC13465 NCTC unknown unknown unknown unknown unknown unknown unknown KpI n/a 776 - - - - NA NA NA NA NA NA NA NANCTC11686 NCTC unknown unknown unknown unknown unknown unknown I2 KpI n/a 1026 - - - - NA NA NA NA NA NA NA NANCTC9177 NCTC Denmark 1952 human sputum respiratory unknown 4425/51 KpIII n/a 1217 - - - - NA NA NA NA NA NA NA NANCTC10262 NCTC unknown unknown unknown unknown unknown unknown K 71 KpIII n/a 1225 - - - - NA NA NA NA NA NA NA NANCTC11357 NCTC unknown unknown unknown unknown unknown unknown unknown KpII n/a 1226 - - - - NA NA NA NA NA NA NA NANCTC9134 NCTC Denmark 1952 human urine urine unknown Kleb 1193 KpI n/a 1227 ybt - - - 4 284 ICEKp12 present 16 NA NA NANCTC10314 NCTC UK 1960 unknown unknown unknown unknown L 2794 KpI n/a 5090 - - - - NA NA NA NA NA NA NA NANCTC11358 NCTC unknown unknown unknown unknown unknown unknown 370 KpI n/a 5091 - - - - NA NA NA NA NA NA NA NANCTC11695 NCTC unknown unknown unknown unknown unknown unknown I11 KpIII n/a 5092 - - - - NA NA NA NA NA NA NA NANCTC11697 NCTC unknown unknown unknown unknown unknown unknown I13 KpI n/a 5093 ybt - - iuc 3 314 ? absent no lineage NA NA NANCTC12146 NCTC unknown unknown unknown unknown unknown unknown L95 KpIII n/a 5094 - - - - NA NA NA NA NA NA NA NANCTC13097 NCTC unknown unknown unknown unknown unknown unknown T62 KpIII n/a 5095 - - - - NA NA NA NA NA NA NA NANCTC13098 NCTC unknown unknown unknown unknown unknown unknown T63 KpIII n/a 5096 - - - - NA NA NA NA NA NA NA NANCTC9645 NCTC USA 1955 unknown unknown unknown unknown 5060/53 KpI CG90 5097 - - - iuc NA NA NA NA NA NA NA NACDFO01000001-CDFO01000208 Onori et al. Italy 2011 human blood blood_sterile infection KpVA-5 KpI n/a 258 - - - - NA NA NA NA NA NA NA NACDGB01000001-CDGB01000181 Onori et al. Italy 2011 human blood blood_sterile infection KpVA-7 KpI n/a 258 - - - - NA NA NA NA NA NA NA NACDFQ01000001-CDFQ01000304 Onori et al. Italy 2011 human blood blood_sterile infection KpVA-4 KpI CG258 258 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDCDFR01000001-CDFR01000415 Onori et al. Italy 2013 human blood blood_sterile infection KpVA-3 KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NACDFP01000001-CDFP01000127 Onori et al. Italy 2013 human BAL respiratory infection KpVA-2 KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NACDFU01000001-CDFU01000179 Onori et al. Italy 2013 human blood blood_sterile infection KpVA-11 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDGA01000001-CDGA01000200 Onori et al. Italy 2011 human blood blood_sterile infection KpVA-6 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFT01000001-CDFT01000173 Onori et al. Italy 2013 human BAL respiratory infection KpVA-10 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFW01000001-CDFW01000211 Onori et al. Italy 2013 human BAL respiratory infection KpVA-14 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDGC01000001-CDGC01000169 Onori et al. Italy 2013 human BAL respiratory infection KpVA-8 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDGD01000001-CDGD01000366 Onori et al. Italy 2013 human BAL respiratory infection KpVA-9 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFM01000001-CDFM01000153 Onori et al. Italy 2012 human sputum respiratory infection KpVA-1 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFV01000001-CDFV01000150 Onori et al. Italy 2013 human tracheal aspirate respiratory infection KpVA-12 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFX01000001-CDFX01000178 Onori et al. Italy 2013 human urine urine infection KpVA-16 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFZ01000001-CDFZ01000166 Onori et al. Italy 2013 human urine urine infection KpVA-15 KpI CG258 512 - - - - NA NA NA NA NA NA NA NACDFY01000001-CDFY01000165 Onori et al. Italy 2013 human wound wound infection KpVA-13 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1162296.3 PATRIC Korea unknown human blood blood_sterile infection DSM 30104 KpI CG3 3 ybt clb - - 4 128 ICEKp10 present 12 1 ? ?573.1367 PATRIC USA unknown human Severe Trauma Site unknown infection 4640 KpI CG3 3 ybt clb - - 4 128 ICEKp10 present 12 1 ? ?573.1353 PATRIC unknown unknown unknown unknown unknown unknown ACTC 13883 KpI CG3 3 ybt clb - - 4 128 ICEKp10 present 12 1 ? ?573.1762 PATRIC France 2012 human central venous catheter catheter infection CH1034 KpI CG540 6 ybt - - - 3 152 ICEKp5 absent 14 NA NA NA573.1475 PATRIC France 2010 free-living unknown unknown infection KPM_nasey KpI CG258 11 - - - - NA NA NA NA NA NA NA NA1438730.3 PATRIC USA 2012 human blood blood_sterile infection CHS 24 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA573.1347 PATRIC Spain 2012 human blood blood_sterile infection KP_ST11_OXA48 KpI CG258 11 ybt - - - 3 112 ICEKp4 absent 10 NA NA NA573.1884 PATRIC Israel unknown human blood blood_sterile infection B86 KpI CG258 11 ybt - - - 1 181 ICEKp3 absent 9 NA NA NA573.1499 PATRIC USA 2011 human sputum respiratory infection CAV1392 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA1438792.3 PATRIC USA 2013 human sputum respiratory infection MGH 69 KpI CG258 11 ybt - - - 3 313 ICEKp11 absent 15 NA NA NA1125630.4 PATRIC China 2011 human sputum respiratory unknown HS11286 KpI CG258 11 ybt - - - 3 15 ICEKp3 absent 9 NA NA NA1380908.3 PATRIC China 2010 human 72-year-old male with cerebral infarction after colon carcinoma resection unknown unknown JM45 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA573.1511 PATRIC USA 2014 human unknown unknown unknown CHS93 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA573.1604 PATRIC USA 2014 human unknown unknown unknown CHS208 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA573.1622 PATRIC USA 2014 human unknown unknown unknown CHS229 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA573.1756 PATRIC USA 2014 human unknown unknown unknown CHS86 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA1263871.1 PATRIC USA 2010 human urine urine infection ATCC BAA-2146 KpI CG258 11 - - - - NA NA NA NA NA NA NA NA1432550.3 PATRIC unknown unknown unknown unknown unknown unknown IS33 KpI CG258 11 ybt - - - 1 27 ICEKp4 absent 10 NA NA NA573.1377 PATRIC unknown unknown unknown unknown unknown unknown unknown KpI n/a 12 - - - - NA NA NA NA NA NA NA NA1328391.3 PATRIC USA unknown human blood blood_sterile infection UCICRE 4 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA1236101.6 PATRIC Argentina 1981 human CSF blood_sterile infection JHCK1 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA1328405.3 PATRIC USA 2008 human peritoneal abscess intestinal infection BIDMC 11 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA573.1551 PATRIC USA 2014 human unknown unknown unknown CHS140 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA573.1657 PATRIC unknown 2014 human unknown unknown unknown MGH124 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA573.1747 PATRIC USA 2014 human unknown unknown unknown CHS175 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA573.1761 PATRIC Korea 2013 human Burn Patient unknown infection unknown KpI CG14/15 14 ybt - - - 1 140 ICEKp5 absent 14 NA NA NA72407.92 PATRIC South Africa unknown human unknown unknown unknown ST14:944535499 KpI CG14/15 14 ybt - - - 1 138 ICEKp5 ? 14 NA NA NA1438772.3 PATRIC USA 2013 human urine urine infection CHS 66 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA573.1344 PATRIC Curacao 2002 human urine urine infection SB2390 KpI CG14/15 14 ybt - - - 1 106 ICEKp4 absent 10 NA NA NA1328378.3 PATRIC USA 2012 human urine urine infection MGH 46 KpI CG14/15 14 ybt - - - 3 107 ICEKp4 absent 10 NA NA NA1406314.3 PATRIC USA 2013 human urine urine infection unknown KpI CG14/15 14 ybt - - - 1 140 ICEKp5 absent 14 NA NA NA1203545.3 PATRIC USA unknown unknown unknown unknown unknown WGLW2 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NA1438786.3 PATRIC USA 2013 human bile bile infection MGH 63 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA1438788.3 PATRIC USA 2013 human bile bile infection MGH 65 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA1284818.4 PATRIC USA 2009 human blood blood_sterile infection UHKPC179 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA1284817.3 PATRIC USA 2008 human Catheter tip catheter infection UHKPC57 KpI CG14/15 15 ybt - - - 3 16 ICEKp4 absent 10 NA NA NA1381121.4 PATRIC Taiwan 2010 human rectal swab intestinal carriage 303K KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA1329843.3 PATRIC USA 2012 human respiratory tract respiratory unknown BIDMC 33B KpI CG14/15 15 ybt - - - 1 28 ICEKp4 absent 10 NA NA NA573.1391 PATRIC Italy 2013 human unknown unknown unknown 18PV KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA573.1465 PATRIC Italy 2012 human unknown unknown unknown 99SGR KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA573.1527 PATRIC USA 2014 human unknown unknown unknown CHS112 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA573.1646 PATRIC unknown 2014 human unknown unknown unknown MGH101 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA573.1678 PATRIC unknown 2014 human unknown unknown unknown UCI96 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA573.1392 PATRIC Italy 2013 human unknown unknown unknown 19PV KpI CG14/15 15 ybt - - - 1 28 ICEKp4 absent 10 NA NA NA573.1633 PATRIC unknown 2014 human unknown unknown unknown MGH81 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA573.1648 PATRIC unknown 2014 human unknown unknown unknown MGH111 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA573.1653 PATRIC unknown 2014 human unknown unknown unknown MGH115 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA573.1654 PATRIC unknown 2014 human unknown unknown unknown MGH117 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA573.1359 PATRIC USA 2012 human soldier combat wound wound infection BAMC 07-18 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NA1438798.3 PATRIC USA 2013 human wound wound infection MGH 75 KpI CG14/15 15 ybt - - - 1 162 ICEKp4 absent 10 NA NA NA573.1378 PATRIC Italy 2012 human unknown unknown unknown 100SGR KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NA573.1411 PATRIC Italy 2013 human unknown unknown unknown 41AVR KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NA573.1631 PATRIC USA 2014 human unknown unknown unknown BWH58 KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NA573.1665 PATRIC unknown 2014 human unknown unknown unknown BIDMC91 KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NA573.1361 PATRIC China 2013 human blood blood_sterile infection XH209 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NA1438702.3 PATRIC USA 2013 human sputum respiratory infection BIDMC 69 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NA1438785.3 PATRIC USA 2013 human sputum respiratory infection MGH 60 KpI CG17/20 17 ybt - - - 3 20 ICEKp4 absent 10 NA NA NA573.1663 PATRIC unknown 2014 human unknown unknown unknown BIDMC89 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NA1328393.3 PATRIC USA unknown human urine urine infection UCICRE 7 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NA1328424.3 PATRIC USA 2012 human urine urine infection BIDMC 35 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NA1438809.3 PATRIC USA unknown human urine urine infection UCI 64 KpI CG17/20 17 - - - - NA NA NA NA NA NA NA NA1438706.3 PATRIC USA 2013 human urine urine infection BWH 48 KpI CG17/20 17 ybt - - - 3 231 ICEKp11 present 15 NA NA NA1328363.3 PATRIC USA 2012 human respiratory respiratory infection MGH 18 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NA573.1464 PATRIC Italy 2012 human unknown unknown unknown 98SGR KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NA573.1679 PATRIC USA 2013 human urine urine infection JS86C16 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NA1438793.3 PATRIC USA 2013 human urine urine infection MGH 70 KpI CG17/20 20 ybt - - - 4 135 ICEKp5 absent 14 NA NA NA484021.57 PATRIC Taiwan unknown human liver abscess liver infection NTUH-K2044 KpI CG23 23 ybt - iro iuc 1 326 ICEKp1 absent 2 NA NA NA1193292.6 PATRIC Taiwan 2002 human liver abscess liver infection 1084 KpI CG23 23 ybt clb - - 1 47 ICEKp10 present 1 2 no no573.1641 PATRIC unknown 2014 human unknown unknown unknown MGH94 KpI CG23 23 ybt clb iro iuc 1 57 ICEKp10 present 1 2 no no573.166 PATRIC unknown 2013 human unknown unknown unknown BIDMC85 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 yes no573.1661 PATRIC unknown 2014 human unknown unknown unknown BIDMC86 KpI CG23 23 ybt clb iro iuc 1 59 ICEKp10 absent 1 2 no no1438754.3 PATRIC USA 2013 human abscess abscess_pus infection CHS 48 KpI CG25 25 ybt - iro iuc 4/3? 323 ICEKp1 absent 2 NA NA NA573.1632 PATRIC USA 2014 human unknown unknown unknown BWH62 KpI CG25 25 - - iro iuc NA NA NA NA NA NA NA NA1438749.3 PATRIC USA 2013 human urine urine infection CHS 43 KpI CG25 25 ybt - iro iuc 4/3? 323 ICEKp1 absent 2 NA NA NA573.1363 PATRIC China 2013 human sputum respiratory infection XDR KpI CG29 29 - - - - NA NA NA NA NA NA NA NA573.1457 PATRIC Italy 2012 human unknown unknown unknown 91SGR KpI CG29 29 - - - - NA NA NA NA NA NA NA NA573.157 PATRIC USA 2014 human unknown unknown unknown CHS161 KpI CG29 29 - - - - NA NA NA NA NA NA NA NA573.1556 PATRIC USA 2014 human unknown unknown unknown CHS146 KpI CG29 29 ybt - - - 1 151 ICEKp5 absent 14 NA NA NA1365186.3 PATRIC Australia unknown unknown environment NA NA KP-1 KpI CG29 29 - - - - NA NA NA NA NA NA NA NA1328324.3 PATRIC USA 2012 human groin unknown unknown KPNIH27 KpI CG34 34 - - - - NA NA NA NA NA NA NA NA1328426.3 PATRIC USA 2012 human urine urine infection BIDMC 40 KpI CG34 34 - - - - NA NA NA NA NA NA NA NA1438807.3 PATRIC USA unknown human urine urine infection UCI 62 KpI CG34 34 - - - - NA NA NA NA NA NA NA NA1250520.3 PATRIC Spain unknown human stool intestinal carriage RYC492 KpI CG35 35 - - - - NA NA NA NA NA NA NA NA573.1398 PATRIC Italy 2013 human unknown unknown unknown 25BO KpI CG35 35 ybt - - - 4 156 ? absent 14 NA NA NA573.1399 PATRIC Italy 2013 human unknown unknown unknown 26BO KpI CG35 35 ybt - - - 1 197 ICEKp9 absent 8 NA NA NA573.1446 PATRIC Italy 2012 human unknown unknown unknown 79RE KpI CG35 35 ybt - - - 4 176 ICEKp3 absent 9 NA NA NA573.1459 PATRIC Italy 2012 human unknown unknown unknown 93SGR KpI CG35 35 ybt - - - 1 175 ICEKp9 absent 8 NA NA NA1438787.3 PATRIC USA 2013 human urine urine infection MGH 64 KpI CG35 35 - - - - NA NA NA NA NA NA NA NA1294269.3 PATRIC unknown unknown unknown mangrove sediment slurry NA NA HSL4 KpI CG35 35 - - - - NA NA NA NA NA NA NA NA1400167.3 PATRIC USA 2013 human urine urine infection BIDMC 51 KpI CG36 36 ybt - - - 3 71 ICEKp4 absent 10 NA NA NA573.1688 PATRIC USA 2013 human wound wound infection 1035_KPNE KpI CG36 36 - - - - NA NA NA NA NA NA NA NA573.1345 PATRIC China 2012 human bile bile infection 5422 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1226115.3 PATRIC Spain 2008 human blood blood_sterile infection KpQ3 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1395574.3 PATRIC Spain 2008 human blood blood_sterile infection KpQ24 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1395575.3 PATRIC Spain 2008 human blood blood_sterile infection KpQ15 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1328427.3 PATRIC USA 2012 human blood blood_sterile infection BIDMC 41 KpI CG37 37 ybt - - - 4 123 ICEKp8 absent 3 NA NA NA1328390.3 PATRIC USA unknown human sputum respiratory infection UCICRE 2 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1400166.3 PATRIC USA 2012 human sputum respiratory infection BIDMC 48 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA573.1389 PATRIC Italy 2011 human unknown unknown unknown 16BO KpI CG37 37 - - - - NA NA NA NA NA NA NA NA573.1401 PATRIC Italy 2011 human unknown unknown unknown 28BO KpI CG37 37 - - - - NA NA NA NA NA NA NA NA573.1407 PATRIC Italy 2013 human unknown unknown unknown 36AVR KpI CG37 37 - - - - NA NA NA NA NA NA NA NA573.1435 PATRIC Italy 2011 human unknown unknown unknown 68BO KpI CG37 37 - - - - NA NA NA NA NA NA NA NA573.1437 PATRIC Italy 2011 human unknown unknown unknown 70BO KpI CG37 37 - - - - NA NA NA NA NA NA NA NA573.1634 PATRIC unknown 2014 human unknown unknown unknown MGH82 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1328368.3 PATRIC USA 2012 human urine urine infection MGH 30 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1438795.3 PATRIC USA 2013 human urine urine infection MGH 72 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1438811.3 PATRIC USA unknown human urine urine infection UCI 68 KpI CG37 37 - - - - NA NA NA NA NA NA NA NA1328415.3 PATRIC USA 2010 human urine urine infection BIDMC 18D KpI CG37 37 ybt - - - 4 123 ICEKp8 absent 3 NA NA NA1328416.3 PATRIC USA 2012 human urine urine infection BIDMC 21 KpI CG37 37 ybt - - - 4 123 ICEKp8 absent 3 NA NA NA1400163.3 PATRIC USA 2013 human urine urine infection BIDMC 46a KpI CG37 37 ybt - - - 4 123 ICEKp8 absent 3 NA NA NA1400169.3 PATRIC USA 2013 human urine urine infection BIDMC 53 KpI CG37 37 ybt - - - 4 123 ICEKp8 absent 3 NA NA NA1328379.3 PATRIC USA 2012 human wound wound infection MGH 47 KpI CG37 37 ybt - - - 4 124 ICEKp8 absent 3 NA NA NA272620.9 PATRIC USA 1994 human sputum respiratory infection MGH 78578 KpI n/a 38 - - - - NA NA NA NA NA NA NA NA573.1713 PATRIC USA 2013 human urine urine infection 863_KPNE KpI CG43 43 - - - - NA NA NA NA NA NA NA NA1431455.3 PATRIC China unknown unknown blood blood_sterile infection NB60 KpI CG43 43 ybt clb - - 3 288 ICEKp10 present 17 3 ? ?1284797.4 PATRIC USA 2010 human blood blood_sterile infection DMC0799 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NA1438727.3 PATRIC USA 2012 human rectal swab intestinal carriage CHS 21 KpI CG45 45 - - - - NA NA NA NA NA NA NA NA573.14 PATRIC Italy 2011 human unknown unknown unknown 27BO KpI CG45 45 ybt - - - 1 79 ICEKp4 absent 10 NA NA NA573.1429 PATRIC Italy 2012 human unknown unknown unknown 60BG KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NA573.146 PATRIC Italy 2012 human unknown unknown unknown 94SGR KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NA573.1647 PATRIC unknown 2014 human unknown unknown unknown MGH102 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NA573.1672 PATRIC unknown 2014 human unknown unknown unknown UCI82 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NA573.1476 PATRIC USA 2012 unknown Turkey cecum NA NA UMNturkey9 KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NA1409963.3 PATRIC USA 2011 human blood blood_sterile infection MRSN 3562 KpI ST48 48 ybt - - - 1 139 ICEKp5 absent 14 NA NA NA1162297.3 PATRIC China unknown human pneumonia respiratory infection LCT-KP214 KpI ST48 48 ybt clb - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED1352932.3 PATRIC China unknown human unknown unknown unknown LCT-KP182 KpI ST48 48 ybt clb - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED1352933.3 PATRIC China unknown human unknown unknown unknown LCT-KP289 KpI ST48 48 ybt clb - - 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED1409962.3 PATRIC USA 2009 human wound wound infection MRSN 2404 KpI ST48 48 - - - - NA NA NA NA NA NA NA NA1409966.3 PATRIC Honduras 2012 human wound wound infection HE12 KpI ST48 48 ybt - - - 3 120 ? absent 10 NA NA NA1203544.3 PATRIC USA unknown unknown unknown unknown unknown WGLW1 KpI ST48 48 ybt clb - - 1 227 ICEKp10 present no lineage 3 yes no1203546.5 PATRIC USA unknown unknown unknown unknown unknown WGLW3 KpI ST48 48 ybt clb - - 1 227 ICEKp10 present no lineage 3 yes no1455602.3 PATRIC USA 2002 human peri-anal swab culture intestinal carriage 4006 KpI n/a 54 - - - - NA NA NA NA NA NA NA NA1449984.3 PATRIC Malaysia unknown human tongue tissue unknown T2-1-1 KpI CG65 65 - - iro iuc NA NA NA NA NA NA NA NA1449985.3 PATRIC Malaysia unknown human tongue tissue unknown T2-1-2 KpI CG65 65 - - iro iuc NA NA NA NA NA NA NA NA1392499.4 PATRIC Taiwan 2002 human unknown unknown unknown 1158 KpI CG65 65 ybt clb - - 4 235 ICEKp10 present 17 3 no no573.1488 PATRIC unknown unknown unknown unknown unknown unknown CIP 52.145 KpI CG66 66 ybt clb iro iuc 3 315 ICEKp10 present 12 1 yes no1267512.3 PATRIC unknown unknown unknown unknown unknown unknown B5055 KpI CG66 66 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED861365.4 PATRIC France 2004 human rhinoscleroma rhinoscleroma infection SB3432 KpI n/a 67 - - iroC iuc NA NA NA NA NA NA NA NA667127.8 PATRIC unknown unknown unknown unknown unknown unknown ATCC 13884 derivative KpI n/a 67 ybt - iroC iuc 1 309 ICE_rhino present 11 NA NA NA573.1644 PATRIC unknown 2014 human unknown unknown unknown MGH97 KpI n/a 70 ybt - - - 1 195 ICEKp9 absent 8 NA NA NA1438783.3 PATRIC USA 2013 human urine urine infection MGH 52 KpI n/a 70 - - - - NA NA NA NA NA NA NA NA1438797.3 PATRIC USA 2013 human urine urine infection MGH 74 KpI CG490 76 - - - - NA NA NA NA NA NA NA NA1244085.3 PATRIC Taiwan unknown human liver abscess liver infection CG43 KpI CG86 86 - - - - NA NA NA NA NA NA NA NA1267897.3 PATRIC USA unknown human liver abscess liver infection unknown KpI CG86 86 ybt - iro iuc ? 72 ? absent 10 NA NA NA1400183.3 PATRIC USA unknown human sputum respiratory infection UCI 42 KpI CG86 86 - - iro iuc NA NA NA NA NA NA NA NA1328392.3 PATRIC USA unknown human sputum respiratory infection UCICRE 6 KpI CG86 86 ybt - iro iuc 3 206 ICEKp3 absent 9 NA NA NA1379688.3 PATRIC unknown unknown unknown unknown unknown unknown SA1 KpI CG86 86 ybt - iro iuc 4 13 ICEKp12 absent no lineage NA NA NA1392500.3 PATRIC unknown unknown unknown unknown unknown unknown HK787 KpI CG86 86 ybt - - - 3 207 ICEKp3 absent 9 NA NA NA72407.102 PATRIC South Africa 2013 human Pus abscess_pus infection ST101:939996824 KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA72407.87 PATRIC South Africa 2013 human Pus abscess_pus infection ST101:945165838 KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA72407.98 PATRIC South Africa unknown human Pus abscess_pus infection ST101:957089165 KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA72407.86 PATRIC South Africa 2013 human blood blood_sterile infection ST101:951373950 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.104 PATRIC South Africa unknown human sputum respiratory infection ST101:945154233 KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA72407.97 PATRIC South Africa 2013 human TIP unknown unknown ST101:951384356 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.1 PATRIC South Africa 2013 human unknown unknown unknown ST101:U44822 KpI CG43 101 ybt - - - 3 199 ICEKp3 absent 9 NA NA NA72407.84 PATRIC South Africa unknown human unknown unknown unknown ST101:950171785 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.85 PATRIC South Africa unknown human unknown unknown unknown ST101:960186733 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.9 PATRIC South Africa unknown human unknown unknown unknown ST101:950173000 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.93 PATRIC South Africa unknown human unknown unknown unknown ST2016:951362657 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.103 PATRIC South Africa 2013 human urine urine infection ST101:951363981 KpI CG43 101 ybt - - - 3 184 ICEKp3 absent 9 NA NA NA72407.89 PATRIC South Africa 2013 human urine urine infection ST101:945169659 KpI CG43 101 ybt - - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED72407.96 PATRIC South Africa 2013 human urine urine infection ST101:957083896 KpI CG43 101 ybt - - - 3 183 ? absent 9 NA NA NA72407.99 PATRIC South Africa 2013 human urine urine infection ST101:957083320 KpI CG43 101 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA573.1349 PATRIC USA 1981 human urine urine infection IA565 KpI CG152 105 - - - - NA NA NA NA NA NA NA NA1438698.3 PATRIC USA 2013 human urine urine infection BIDMC 55 KpI CG152 105 - - - - NA NA NA NA NA NA NA NA573.1674 PATRIC unknown 2014 human unknown unknown unknown UCI92 KpI n/a 107 - - - - NA NA NA NA NA NA NA NA1409964.3 PATRIC USA 2011 human tissue tissue infection MRSN 3852 KpI CG111 111 ybt - - - 1 164 ICEKp2 present 10 NA NA NA573.1635 PATRIC unknown 2014 human unknown unknown unknown MGH84 KpI CG111 111 - - - - NA NA NA NA NA NA NA NA573.1652 PATRIC unknown 2014 human unknown unknown unknown MGH116 KpI CG111 111 ybt - - - 1 163 ICEKp2 present 10 NA NA NA1328366.3 PATRIC USA 2012 human urine urine infection MGH 21 KpI CG111 111 ybt - - - 1 147 ICEKp5 absent 14 NA NA NA1328370.3 PATRIC USA 2012 human urine urine infection MGH 32 KpI CG111 111 ybt - - - 1 225 ICEKp7 absent 7 NA NA NA1328418.3 PATRIC USA 2012 human urine urine infection BIDMC 23 KpI CG111 111 ybt - - - 1 99 ICEKp4 absent 10 NA NA NA1328382.3 PATRIC USA 2012 human peritoneal fluid intestinal infection BWH 15 KpI n/a 113 - - - - NA NA NA NA NA NA NA NA1328384.3 PATRIC USA 2012 human sputum respiratory infection BWH 28 KpI CG133 133 ybt clb - - 3 267 ICEKp10 present 17 3 no no1037908.3 PATRIC USA unknown human unknown unknown unknown 1162281 KpI CG133 133 - - - - NA NA NA NA NA NA NA NA1037890.3 PATRIC USA unknown human unknown unknown unknown JH1 KpI n/a 134 - - - - NA NA NA NA NA NA NA NA1328362.3 PATRIC USA 2012 human urine urine infection MGH 17 KpI n/a 134 - - - - NA NA NA NA NA NA NA NA1203547.3 PATRIC USA unknown unknown unknown unknown unknown WGLW5 KpI n/a 134 - - - - NA NA NA NA NA NA NA NA573.165 PATRIC unknown 2014 human unknown unknown unknown MGH113 ? n/a 143 - - - - NA NA NA NA NA NA NA NA507522.6 PATRIC unknown unknown maize the stem tissue of Zea mays NA NA 342 KpIII n/a 146 - - - - NA NA NA NA NA NA NA NA573.1375 PATRIC Australia 2012 human blood blood_sterile infection ST147 KpI CG147 147 ybt - - - 1 280 ICEKp12 present 16 NA NA NA573.1356 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH5262 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1357 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH3823 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1481 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH3707 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1482 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH3020 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1484 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH3823 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1485 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH3707 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1486 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH5262 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1487 PATRIC USA 2014 human respiratory secretion respiratory infection CDPH3020 KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1419 PATRIC Italy 2012 human unknown unknown unknown 49BG KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.143 PATRIC Italy 2011 human unknown unknown unknown 62BG KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1447 PATRIC Italy 2011 human unknown unknown unknown 81RE KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.1449 PATRIC Italy 2012 human unknown unknown unknown 83RE KpI CG147 147 - - - - NA NA NA NA NA NA NA NA573.164 PATRIC unknown 2014 human unknown unknown unknown MGH93 KpI CG147 147 ybt - - - 4 177 ? absent 9 NA NA NA573.1479 PATRIC Nepal 2012 human blood blood_sterile infection 442 KpI CG152 152 ybt - - - 3 161 ? ? no lineage NA NA NA573.1346 PATRIC USA 2004 human urine urine infection Top52 #1721 KpI CG152 152 - - - - NA NA NA NA NA NA NA NA573.1567 PATRIC USA 2014 human unknown unknown unknown CHS159 KpI n/a 158 - - - - NA NA NA NA NA NA NA NA573.1415 PATRIC Italy 2013 human unknown unknown unknown 45AVR KpI n/a 160 - - - - NA NA NA NA NA NA NA NA573.1689 PATRIC USA 2013 human urine urine infection 1263_KPNE KpI n/a 184 - - - - NA NA NA NA NA NA NA NA1328420.3 PATRIC USA 2012 human urine urine infection BIDMC 25 KpI n/a 186 - - - - NA NA NA NA NA NA NA NA573.1599 PATRIC USA 2014 human unknown unknown unknown CHS201 KpI n/a 188 - - - - NA NA NA NA NA NA NA NA1409961.3 PATRIC USA 2009 human wound wound infection MRSN 1319 KpI CG490 199 - - - - NA NA NA NA NA NA NA NA1455604.4 PATRIC USA 2005 human peri-anal swab culture intestinal carriage 11227-1 KpI CG34 228 - - - - NA NA NA NA NA NA NA NA573.1701 PATRIC USA 2013 human tracheal aspirate respiratory infection 743_KPNE KpI n/a 234 ybt clb - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED573.1703 PATRIC USA 2013 human sputum respiratory unknown 813_KPNE KpI n/a 234 ybt clb - - ? 270 ICEKp10 present 17 3 ? ?573.1709 PATRIC USA unknown human unknown unknown unknown 755.rep1_KPNE KpI n/a 234 ybt clb - - ? 269 ICEKp10 present 17 3 ? ?573.171 PATRIC USA unknown human unknown unknown unknown 755.rep2_KPNE KpI n/a 234 ybt clb - - ? 269 ICEKp10 present 17 3 ? ?573.17 PATRIC USA 2013 human urine urine infection 741_KPNE KpI n/a 234 ybt clb - - ? 269 ICEKp10 present 17 3 ? ?1284812.3 PATRIC USA 2008 human urine urine infection UHKPC81 KpI n/a 234 ybt clb - - 4? 269 ICEKp10 present 17 3 ? ?573.1394 PATRIC Italy 2012 human unknown unknown unknown 21PV KpI n/a 240 - - - - NA NA NA NA NA NA NA NA573.1694 PATRIC USA 2012 human urine urine infection 221_KPNE KpI n/a 247 - - - - NA NA NA NA NA NA NA NA573.1684 PATRIC USA 2013 human blood blood_sterile infection 1041_KPNE KpI CG253 253 - - - - NA NA NA NA NA NA NA NA1328421.3 PATRIC USA 2012 human abscess abscess_pus infection BIDMC 32 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438733.3 PATRIC USA 2013 human abscess abscess_pus infection CHS 27 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1758 PATRIC USA 2014 human bile bile infection SY-A KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.137 PATRIC USA 2012 human blood blood_sterile infection 38544 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.176 PATRIC USA 2014 human blood blood_sterile infection SY-B2 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA72407.105 PATRIC Italy 2010 human blood blood_sterile infection KK207/1 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284787.3 PATRIC USA 2008 human blood blood_sterile infection UHKPC40 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284788.3 PATRIC USA 2008 human blood blood_sterile infection UHKPC23 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284789.4 PATRIC USA 2008 human blood blood_sterile infection UHKPC28 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284790.3 PATRIC USA 2008 human blood blood_sterile infection UHKPC05 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284791.4 PATRIC USA 2008 human blood blood_sterile infection UHKPC47 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284792.4 PATRIC USA 2008 human blood blood_sterile infection UHKPC67 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284793.4 PATRIC USA 2008 human blood blood_sterile infection UHKPC69 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284794.4 PATRIC USA 2008 human blood blood_sterile infection UHKPC77 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284795.4 PATRIC USA 2008 human blood blood_sterile infection UHKPC96 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284796.3 PATRIC USA 2010 human blood blood_sterile infection DMC0526 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284798.4 PATRIC USA 2010 human blood blood_sterile infection DMC1097 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284799.4 PATRIC USA 2010 human blood blood_sterile infection DMC1316 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284819.3 PATRIC USA 2008 human blood blood_sterile infection UHKPC45 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304916.4 PATRIC USA 2011 human blood blood_sterile infection 140_1040 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304917.4 PATRIC USA 2012 human blood blood_sterile infection 160_1080 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1310158.5 PATRIC USA 2012 human blood blood_sterile infection Kb140 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328399.3 PATRIC USA 2010 human blood blood_sterile infection BIDMC 2A KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328401.3 PATRIC USA 2008 human blood blood_sterile infection BIDMC 5 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328407.3 PATRIC USA 2010 human blood blood_sterile infection BIDMC 12B KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328409.3 PATRIC USA 2009 human blood blood_sterile infection BIDMC 13 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328411.3 PATRIC USA 2009 human blood blood_sterile infection BIDMC 16 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1384549.3 PATRIC Italy 2010 human blood blood_sterile infection KKBO-1 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1384550.3 PATRIC Italy 2011 human blood blood_sterile infection KKBO-4 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400160.3 PATRIC USA 2012 human blood blood_sterile infection BIDMC 42a KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400161.3 PATRIC USA 2012 human blood blood_sterile infection BIDMC 42b KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438701.3 PATRIC USA 2013 human blood blood_sterile infection BIDMC 68 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438773.3 PATRIC USA 2013 human Blood or urine blood_sterile infection CHS 67 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1371 PATRIC USA 2012 human blood blood_sterile infection 38547 KpI CG258 258 ybt - - - 3 98 ICEKp4 absent 10 NA NA NA1438722.3 PATRIC USA 2013 human blood blood_sterile infection CHS 16 KpI CG258 258 ybt clb - - 3 261 ICEKp10 present 17 3 yes yes - clbB1438723.3 PATRIC USA 2012 human blood blood_sterile infection CHS 17 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438724.3 PATRIC USA 2012 human blood blood_sterile infection CHS 18 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438725.3 PATRIC USA 2010 human blood blood_sterile infection CHS 19 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438729.3 PATRIC USA 2012 human blood blood_sterile infection CHS 23 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438731.3 PATRIC USA 2013 human blood blood_sterile infection CHS 25 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438739.3 PATRIC USA 2013 human blood blood_sterile infection CHS 33 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438743.3 PATRIC USA 2013 human blood blood_sterile infection CHS 37 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438760.3 PATRIC USA 2013 human blood blood_sterile infection CHS 54 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438761.3 PATRIC USA 2013 human blood blood_sterile infection CHS 55 KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 ? yes - clbB1328398.3 PATRIC USA 2010 human "bone tissue, toe" bone infection BIDMC 1 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284826.3 PATRIC USA 2011 human Bodily fluid; pancreatic fluid fluid infection VAKPC269 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284827.3 PATRIC USA 2011 human Bodily fluid; pancreatic fluid fluid infection VAKPC278 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284828.3 PATRIC USA 2011 human Bodily fluid; pancreatic fluid fluid infection VAKPC280 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1087443.3 PATRIC USA 2011 human peritoneal fluid intestinal infection KPNIH4 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1087444.3 PATRIC USA 2011 human peritoneal fluid intestinal infection KPNIH5 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1087445.3 PATRIC USA 2011 human peritoneal fluid intestinal infection KPNIH6 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438699.3 PATRIC USA 2013 human peritoneal fluid intestinal infection BIDMC 60 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA72407.78 PATRIC USA 2013 human perirectal swab intestinal carriage KPNIH30 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1094168.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH8 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1094169.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH9 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1094171.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH11 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128946.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH12 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128948.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH14 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128951.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH17 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128952.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH18 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128953.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH19 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1168062.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH21 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1168063.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH22 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1168064.3 PATRIC USA 2011 human rectal swab intestinal carriage KPNIH23 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400174.3 PATRIC USA unknown human rectal swab intestinal carriage UCI 21 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438745.3 PATRIC USA 2013 human ascitic fluid intestinal unknown CHS 39 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1497 PATRIC USA 2012 human perirectal swab intestinal carriage CAV1596 KpI CG258 258 ybt - - - 2 198 ICEKp3 absent 9 NA NA NA1438711.3 PATRIC USA 2013 human rectal swab intestinal carriage CHS 05 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1284823.3 PATRIC USA 2007 human sputum respiratory carriage UHKPC04 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284829.3 PATRIC USA 2011 human sputum respiratory carriage VAKPC270 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1374 PATRIC USA 2011 human BAL respiratory infection 34618 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328386.3 PATRIC USA 2012 human BAL respiratory infection BWH 36 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438790.3 PATRIC USA 2013 human pleural tissue respiratory infection MGH 67 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1759 PATRIC USA 2014 human respiratory respiratory infection SY-B KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328367.3 PATRIC USA 2012 human respiratory respiratory infection MGH 29 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284815.3 PATRIC USA 2008 human sputum respiratory infection UHKPC24 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284816.3 PATRIC USA 2008 human sputum respiratory infection UHKPC26 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328325.3 PATRIC USA 2012 human sputum respiratory infection KPR0928 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328406.3 PATRIC USA 2012 human sputum respiratory infection BIDMC 12A KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1341693.3 PATRIC South Korea 2011 human sputum respiratory infection MP14 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1343063.3 PATRIC USA 2002 human sputum respiratory infection UKKV901664 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400175.3 PATRIC USA unknown human sputum respiratory infection UCI 22 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438810.3 PATRIC USA unknown human sputum respiratory infection UCI 67 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.135 PATRIC USA 2012 human Bronchoscopy respiratory unknown MRSN8157 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328408.3 PATRIC USA 2012 human endotrachael respiratory unknown BIDMC 12C KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1699 PATRIC USA 2013 human sputum respiratory unknown 733_KPNE KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328389.3 PATRIC USA unknown human sputum respiratory infection UCICRE 1 KpI CG258 258 ybt clb - - 3 272 ICEKp10 present 17 3 no no1438718.3 PATRIC USA 2012 human tracheal respiratory infection CHS 12 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438741.3 PATRIC USA 2013 human tracheal respiratory infection CHS 35 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438759.3 PATRIC USA 2013 human tracheal respiratory infection CHS 53 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1087440.3 PATRIC USA 2011 human Skin lesion skin infection KPNIH1 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128950.3 PATRIC USA 2011 human throat throat carriage KPNIH16 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1128954.3 PATRIC USA 2011 human throat throat carriage KPNIH20 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1225181.3 PATRIC USA 2012 human throat/groin throat carriage KPNIH24 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284824.3 PATRIC USA 2010 human tissue tissue infection VAKPC252 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328369.3 PATRIC USA 2012 human tissue tissue infection MGH 31 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438703.3 PATRIC USA 2013 human tissue tissue infection BWH 45 KpI CG258 258 ybt clb - - 3 247 ICEKp10 present 17 3 no no1438705.3 PATRIC USA 2013 human tissue tissue infection BWH 47 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 no no1236102.6 PATRIC USA 2007 human Clinical unknown infection VA360 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1094170.3 PATRIC USA 2011 human groin unknown unknown KPNIH10 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1438 PATRIC Italy 2011 human unknown unknown unknown 71RE KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1439 PATRIC Italy 2011 human unknown unknown unknown 72RE KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.144 PATRIC Italy 2011 human unknown unknown unknown 73RE KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1442 PATRIC Italy 2011 human unknown unknown unknown 75RE KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1509 PATRIC USA 2014 human unknown unknown unknown CHS91 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.152 PATRIC USA 2014 human unknown unknown unknown CHS102 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.153 PATRIC USA 2014 human unknown unknown unknown CHS114 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1537 PATRIC USA 2014 human unknown unknown unknown CHS123 KpI CG258 258 - clbAB? - - NA NA NA NA NA NA NA NA573.1542 PATRIC USA 2014 human unknown unknown unknown CHS129 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1548 PATRIC USA 2014 human unknown unknown unknown CHS137 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1554 PATRIC USA 2014 human unknown unknown unknown CHS144 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1561 PATRIC USA 2014 human unknown unknown unknown CHS151 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1595 PATRIC USA 2014 human unknown unknown unknown CHS194 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1601 PATRIC USA 2014 human unknown unknown unknown CHS205 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1603 PATRIC USA 2014 human unknown unknown unknown CHS207 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1626 PATRIC USA 2014 human unknown unknown unknown CHS234 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1638 PATRIC unknown 2014 human unknown unknown unknown MGH91 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1643 PATRIC unknown 2014 human unknown unknown unknown MGH95 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1658 PATRIC unknown 2014 human unknown unknown unknown MGH125 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1669 PATRIC unknown 2014 human unknown unknown unknown UCI75 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1671 PATRIC unknown 2014 human unknown unknown unknown UCI81 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1675 PATRIC unknown 2014 human unknown unknown unknown UCI93 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1677 PATRIC unknown 2014 human unknown unknown unknown UCI95 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1185419.3 PATRIC Italy unknown human unknown unknown unknown ST258-K26BO KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1276652.3 PATRIC unknown unknown human unknown unknown unknown ATCC BAA-1705 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1094167.3 PATRIC USA 2011 human ventilator unknown unknown KPNIH7 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1384 PATRIC Italy 2013 human unknown unknown unknown 11PV KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA573.1385 PATRIC Italy 2013 human unknown unknown unknown 12PV KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA573.1386 PATRIC Italy 2013 human unknown unknown unknown 13PV KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA573.1396 PATRIC Italy 2013 human unknown unknown unknown 23PV KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA573.1397 PATRIC Italy 2013 human unknown unknown unknown 24PV KpI CG258 258 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED573.142 PATRIC Italy 2011 human unknown unknown unknown 50BG KpI CG258 258 ybt - - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED573.1424 PATRIC Italy 2011 human unknown unknown unknown 54BG KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA573.1426 PATRIC Italy 2011 human unknown unknown unknown 56BG KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA573.1501 PATRIC USA 2014 human unknown unknown unknown CHS81 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1502 PATRIC USA 2014 human unknown unknown unknown CHS82 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1503 PATRIC USA 2014 human unknown unknown unknown CHS83 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1504 PATRIC USA 2014 human unknown unknown unknown CHS84 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1505 PATRIC USA 2014 human unknown unknown unknown CHS85 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1506 PATRIC USA 2014 human unknown unknown unknown CHS88 KpI CG258 258 ybt clb - - 3 256 ICEKp10 present 17 3 yes yes - clbB573.1507 PATRIC USA 2014 human unknown unknown unknown CHS89 KpI CG258 258 ybt clb - - 3 240 ICEKp10 present 17 3 yes yes - clbB573.1508 PATRIC USA 2014 human unknown unknown unknown CHS90 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.151 PATRIC USA 2014 human unknown unknown unknown CHS92 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1512 PATRIC USA 2014 human unknown unknown unknown CHS94 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1513 PATRIC USA 2014 human unknown unknown unknown CHS95 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1514 PATRIC USA 2014 human unknown unknown unknown CHS96 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1515 PATRIC USA 2014 human unknown unknown unknown CHS97 KpI CG258 258 ybt clb - - 3 257 ICEKp10 present 17 3 yes yes - clbB573.1516 PATRIC USA 2014 human unknown unknown unknown CHS98 KpI CG258 258 ybt clb - - 3 258 ICEKp10 present 17 3 yes yes - clbB573.1517 PATRIC USA 2014 human unknown unknown unknown CHS99 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1518 PATRIC USA 2014 human unknown unknown unknown CHS100 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1519 PATRIC USA 2014 human unknown unknown unknown CHS101 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1521 PATRIC USA 2014 human unknown unknown unknown CHS104 KpI CG258 258 ybt clb - - 3 262 ICEKp10 present 17 3 yes yes - clbB573.1522 PATRIC USA 2014 human unknown unknown unknown CHS105 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1523 PATRIC USA 2014 human unknown unknown unknown CHS106 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1525 PATRIC USA 2014 human unknown unknown unknown CHS109 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1526 PATRIC USA 2014 human unknown unknown unknown CHS110 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1528 PATRIC USA 2014 human unknown unknown unknown CHS111 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1529 PATRIC USA 2014 human unknown unknown unknown CHS113 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1531 PATRIC USA 2014 human unknown unknown unknown CHS115 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1532 PATRIC USA 2014 human unknown unknown unknown CHS116 KpI CG258 258 ybt clb - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED573.1533 PATRIC USA 2014 human unknown unknown unknown CHS117 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1534 PATRIC USA 2014 human unknown unknown unknown CHS118 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1536 PATRIC USA 2014 human unknown unknown unknown CHS122 KpI CG258 258 ybt clb - iucB 3 241 ICEKp10 present 17 3 yes "yes - clbB, clbH"573.1538 PATRIC USA 2014 human unknown unknown unknown CHS126 KpI CG258 258 ybt clb - - 3 242 ICEKp10 present 17 3 yes yes - clbB573.1539 PATRIC USA 2014 human unknown unknown unknown CHS125 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.154 PATRIC USA 2014 human unknown unknown unknown CHS127 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1541 PATRIC USA 2014 human unknown unknown unknown CHS128 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1543 PATRIC USA 2014 human unknown unknown unknown CHS131 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1544 PATRIC USA 2014 human unknown unknown unknown CHS132 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1545 PATRIC USA 2014 human unknown unknown unknown CHS133 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1546 PATRIC USA 2014 human unknown unknown unknown CHS134 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1547 PATRIC USA 2014 human unknown unknown unknown CHS135 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1549 PATRIC USA 2014 human unknown unknown unknown CHS139 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.155 PATRIC USA 2014 human unknown unknown unknown CHS138 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1552 PATRIC USA 2014 human unknown unknown unknown CHS141 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1553 PATRIC USA 2014 human unknown unknown unknown CHS142 KpI CG258 258 ybt clb - - 3 297 ICEKp10 present 17 3 yes yes - clbB573.1557 PATRIC USA 2014 human unknown unknown unknown CHS147 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1558 PATRIC USA 2014 human unknown unknown unknown CHS148 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1559 PATRIC USA 2014 human unknown unknown unknown CHS150 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.156 PATRIC USA 2014 human unknown unknown unknown CHS149 KpI CG258 258 ybt clb - - 3 241 ICEKp10 present 17 3 yes "yes - clbB, clbH"573.1562 PATRIC USA 2014 human unknown unknown unknown CHS152 KpI CG258 258 ybt clb - - 3 259 ICEKp10 present 17 3 yes yes - clbB573.1563 PATRIC USA 2014 human unknown unknown unknown CHS154 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1564 PATRIC USA 2014 human unknown unknown unknown CHS156 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1565 PATRIC USA 2014 human unknown unknown unknown CHS155 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1566 PATRIC USA 2014 human unknown unknown unknown CHS157 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1568 PATRIC USA 2014 human unknown unknown unknown CHS158 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1569 PATRIC USA 2014 human unknown unknown unknown CHS160 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1571 PATRIC USA 2014 human unknown unknown unknown CHS163 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1573 PATRIC USA 2014 human unknown unknown unknown CHS164 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1574 PATRIC USA 2014 human unknown unknown unknown CHS165 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1575 PATRIC USA 2014 human unknown unknown unknown CHS166 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1576 PATRIC USA 2014 human unknown unknown unknown CHS167 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1577 PATRIC USA 2014 human unknown unknown unknown CHS168 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1578 PATRIC USA 2014 human unknown unknown unknown CHS169 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1579 PATRIC USA 2014 human unknown unknown unknown CHS170 KpI CG258 258 ybt clb - - 3 243 ICEKp10 present 17 3 yes yes - clbB573.158 PATRIC USA 2014 human unknown unknown unknown CHS172 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1581 PATRIC USA 2014 human unknown unknown unknown CHS173 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1583 PATRIC USA 2014 human unknown unknown unknown CHS176 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1584 PATRIC USA 2014 human unknown unknown unknown CHS177 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1585 PATRIC USA 2014 human unknown unknown unknown CHS179 KpI CG258 258 ybt clb - - 3 244 ICEKp10 present 17 3 yes yes - clbB573.1586 PATRIC USA 2014 human unknown unknown unknown CHS181 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1587 PATRIC USA 2014 human unknown unknown unknown CHS182 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1588 PATRIC USA 2014 human unknown unknown unknown CHS183 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1589 PATRIC USA 2014 human unknown unknown unknown CHS184 KpI CG258 258 ybt clb - - 3 257 ICEKp10 present 17 3 yes yes - clbB573.159 PATRIC USA 2014 human unknown unknown unknown CHS185 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1591 PATRIC USA 2014 human unknown unknown unknown CHS186 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1592 PATRIC USA 2014 human unknown unknown unknown CHS189 KpI CG258 258 ybt clb - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED573.1593 PATRIC USA 2014 human unknown unknown unknown CHS191 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1594 PATRIC USA 2014 human unknown unknown unknown CHS192 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1596 PATRIC USA 2014 human unknown unknown unknown CHS195 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1597 PATRIC USA 2014 human unknown unknown unknown CHS197 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1598 PATRIC USA 2014 human unknown unknown unknown CHS200 KpI CG258 258 ybt clb - - 3 240 ICEKp10 present 17 3 yes yes - clbB573.16 PATRIC USA 2014 human unknown unknown unknown CHS202 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1605 PATRIC USA 2014 human unknown unknown unknown CHS209 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1606 PATRIC USA 2014 human unknown unknown unknown CHS210 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1608 PATRIC USA 2014 human unknown unknown unknown CHS213 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1609 PATRIC USA 2014 human unknown unknown unknown CHS214 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.161 PATRIC USA 2014 human unknown unknown unknown CHS215 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1611 PATRIC USA 2014 human unknown unknown unknown CHS216 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1612 PATRIC USA 2014 human unknown unknown unknown CHS217 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1613 PATRIC USA 2014 human unknown unknown unknown CHS218 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1614 PATRIC USA 2014 human unknown unknown unknown CHS219 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1615 PATRIC USA 2014 human unknown unknown unknown CHS220 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1616 PATRIC USA 2014 human unknown unknown unknown CHS221 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1617 PATRIC USA 2014 human unknown unknown unknown CHS223 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1618 PATRIC USA 2014 human unknown unknown unknown CHS224 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1619 PATRIC USA 2014 human unknown unknown unknown CHS225 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.162 PATRIC USA 2014 human unknown unknown unknown CHS226 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1621 PATRIC USA 2014 human unknown unknown unknown CHS228 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1623 PATRIC USA 2014 human unknown unknown unknown CHS230 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1624 PATRIC USA 2014 human unknown unknown unknown CHS231 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1625 PATRIC USA 2014 human unknown unknown unknown CHS232 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1627 PATRIC USA 2014 human unknown unknown unknown CHS235 KpI CG258 258 ybt clb - - 3 260 ICEKp10 present 17 3 yes yes - clbB573.1628 PATRIC USA 2014 human unknown unknown unknown CHS236 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1629 PATRIC USA 2014 human unknown unknown unknown CHS237 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.163 PATRIC USA 2014 human unknown unknown unknown BWH53 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 no no573.1673 PATRIC unknown 2014 human unknown unknown unknown UCI91 KpI CG258 258 ybt clb - - 3 220 ICEKp10 present no lineage 3 no no573.1737 PATRIC USA 2014 human unknown unknown unknown CHS240 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1738 PATRIC unknown 2013 human unknown unknown unknown UCI69 KpI CG258 258 ybt clb - - 3 272 ICEKp10 present 17 3 no no573.1739 PATRIC USA 2014 human unknown unknown unknown CHS239 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.174 PATRIC USA 2014 human unknown unknown unknown CHS238 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1741 PATRIC USA 2014 human unknown unknown unknown CHS212 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1742 PATRIC USA 2014 human unknown unknown unknown CHS198 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1743 PATRIC USA 2014 human unknown unknown unknown CHS196 KpI CG258 258 ybt clb - - 3 241 ICEKp10 present 17 3 yes "yes - clbB, clbH"573.1744 PATRIC USA 2014 human unknown unknown unknown CHS178 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1745 PATRIC USA 2014 human unknown unknown unknown CHS187 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1746 PATRIC USA 2014 human unknown unknown unknown CHS171 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1748 PATRIC USA 2014 human unknown unknown unknown CHS130 KpI CG258 258 ybt clb - - 4 251 ICEKp10 present 17 3 yes yes - clbB573.175 PATRIC USA 2014 human unknown unknown unknown CHS124 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1751 PATRIC USA 2014 human unknown unknown unknown CHS120 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1752 PATRIC USA 2014 human unknown unknown unknown CHS119 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1753 PATRIC USA 2014 human unknown unknown unknown CHS108 KpI CG258 258 ybt clb - - 1 245 ICEKp10 present 17 3 yes yes - clbB573.1754 PATRIC USA 2014 human unknown unknown unknown CHS103 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB573.1755 PATRIC USA 2014 human unknown unknown unknown CHS87 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB72407.75 PATRIC USA 2013 human unknown unknown unknown KPNIH33 KpI CG258 258 ybt clb - - 4 283 ICEKp10 present 17 3 no no1228988.4 PATRIC Australia 2012 human unknown unknown unknown KpMDU1 KpI CG258 258 ybt - - - 4 301 ICEKp2 absent 13 NA NA NA1284800.4 PATRIC USA 2008 human urine urine carriage UHKPC61 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284801.3 PATRIC USA 2008 human urine urine carriage UHKPC48 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284802.4 PATRIC USA 2008 human urine urine carriage UHKPC33 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284803.4 PATRIC USA 2008 human urine urine carriage UHKPC59 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284804.4 PATRIC USA 2007 human urine urine carriage UHKPC07 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284805.4 PATRIC USA 2008 human urine urine carriage UHKPC17 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284806.4 PATRIC USA 2008 human urine urine carriage UHKPC18 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284807.4 PATRIC USA 2008 human urine urine carriage UHKPC31 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284808.4 PATRIC USA 2007 human urine urine carriage UHKPC06 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284809.4 PATRIC USA 2007 human urine urine carriage UHKPC02 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284810.3 PATRIC USA 2007 human urine urine carriage UHKPC09 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284820.3 PATRIC USA 2008 human urine urine carriage UHKPC22 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284821.3 PATRIC USA 2008 human urine urine carriage UHKPC29 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284822.3 PATRIC USA 2008 human urine urine carriage UHKPC32 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284825.3 PATRIC USA 2010 human urine urine carriage VAKPC254 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1369 PATRIC USA 2010 human urine urine infection 32192 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA72407.106 PATRIC USA 2008 human urine urine infection ST258_FL KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1212766.3 PATRIC Israel 2006 human urine urine infection ST258-490 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284811.3 PATRIC USA 2007 human urine urine infection UHKPC01 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284813.3 PATRIC USA 2008 human urine urine infection UHKPC27 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284814.3 PATRIC USA 2008 human urine urine infection UHKPC 52 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284830.3 PATRIC USA 2011 human urine urine infection VAKPC276 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284831.3 PATRIC USA 2011 human urine urine infection VAKPC297 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1284832.3 PATRIC USA 2011 human urine urine infection VAKPC309 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1310159.5 PATRIC USA 2012 human urine urine infection Kb677 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328383.3 PATRIC USA 2012 human urine urine infection BWH 22 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328387.3 PATRIC USA 2012 human urine urine infection BWH 41 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328396.3 PATRIC USA unknown human urine urine infection UCICRE 13 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328402.3 PATRIC USA 2012 human urine urine infection BIDMC 7A KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328403.3 PATRIC USA 2012 human urine urine infection BIDMC 7B KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328410.3 PATRIC USA 2009 human urine urine infection BIDMC 14 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328412.3 PATRIC USA 2012 human urine urine infection BIDMC 18A KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328413.3 PATRIC USA 2010 human urine urine infection BIDMC 18B KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328414.3 PATRIC USA 2010 human urine urine infection BIDMC 18C KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328423.3 PATRIC USA 2012 human urine urine infection BIDMC 34 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400162.3 PATRIC USA 2013 human urine urine infection BIDMC 45 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400172.3 PATRIC USA unknown human urine urine infection UCI 19 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1400178.3 PATRIC USA unknown human urine urine infection UCI 33 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1420012.3 PATRIC USA 2010 human urine urine infection 30660/NJST258_1 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1420013.3 PATRIC USA 2010 human urine urine infection 30684/NJST258_2 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438697.3 PATRIC USA 2013 human urine urine infection BIDMC 54 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438750.3 PATRIC USA 2013 human urine urine infection CHS 44 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438753.3 PATRIC USA 2013 human urine urine infection CHS 47 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438755.3 PATRIC USA 2013 human urine urine infection CHS 49 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438757.3 PATRIC USA 2013 human urine urine infection CHS 51 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438762.3 PATRIC USA 2013 human urine urine infection CHS 56 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438782.3 PATRIC USA 2013 human urine urine infection MGH 51 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438784.3 PATRIC USA 2013 human urine urine infection MGH 59 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438794.3 PATRIC USA 2013 human urine urine infection MGH 71 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438800.3 PATRIC USA 2013 human urine urine infection MGH 79 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438806.3 PATRIC USA unknown human urine urine infection UCI 61 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304918.4 PATRIC USA 2012 human urine urine unknown 120_1020 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304919.4 PATRIC USA 2012 human urine urine unknown 280_1220 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304920.3 PATRIC USA 2012 human urine urine unknown 361_1301 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304921.4 PATRIC USA 2012 human urine urine unknown 440_1540 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304922.3 PATRIC USA 2012 human urine urine unknown 500_1420 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304923.3 PATRIC USA 2012 human urine urine unknown 540_1460 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1304924.3 PATRIC USA 2012 human urine urine unknown 646_1568 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1757 PATRIC Australia 2014 human urine urine infection ST258 KpI CG258 258 ybt - - - 4 299 ICEKp2 absent 13 NA NA NA1400180.3 PATRIC USA unknown human urine urine infection UCI 37 KpI CG258 258 ybt clb - - 3 266 ICEKp10 present 17 3 no no1400181.3 PATRIC USA unknown human urine urine infection UCI 38 KpI CG258 258 ybt clb - - 3 267 ICEKp10 present 17 3 ? ?1400182.3 PATRIC USA unknown human urine urine infection UCI 41 KpI CG258 258 ybt clb - - 3 267 ICEKp10 present 17 3 no yes - clbB1400184.3 PATRIC USA unknown human urine urine infection UCI 43 KpI CG258 258 ybt clb - - 3 264 ICEKp10 present 17 3 no no1400185.3 PATRIC USA unknown human urine urine infection UCI 44 KpI CG258 258 ybt clb - - 3 264 ICEKp10 present 17 3 no no1438709.3 PATRIC USA 2012 human urine urine infection CHS 03 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438713.3 PATRIC USA 2013 human urine urine infection CHS 07 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438714.3 PATRIC USA 2013 human urine urine infection CHS 08 KpI CG258 258 ybt clb - - 4 289 ICEKp10 present 17 3 ? ?1438715.3 PATRIC USA 2012 human urine urine infection CHS 09 KpI CG258 258 ybt clb - - 3 253 ICEKp10 present 17 3 yes yes - clbB1438717.3 PATRIC USA 2013 human urine urine infection CHS 11 KpI CG258 258 ybt clb - - 3 263 ICEKp10 present 17 3 yes yes - clbB1438719.3 PATRIC USA 2012 human urine urine infection CHS 13 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438720.3 PATRIC USA 2012 human urine urine infection CHS 14 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438726.3 PATRIC USA 2013 human urine urine infection CHS 20 KpI CG258 258 ybt clb - - 4 256 ICEKp10 present 17 3 yes yes - clbB1438728.3 PATRIC USA 2013 human urine urine infection CHS 22 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438732.3 PATRIC USA 2013 human urine urine infection CHS 26 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438734.3 PATRIC USA 2013 human urine urine infection CHS 28 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438735.3 PATRIC USA 2013 human urine urine infection CHS 29 KpI CG258 258 ybt clb - - 3 254 ICEKp10 present 17 3 yes yes - clbB1438736.3 PATRIC USA 2013 human urine urine infection CHS 30 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438737.3 PATRIC USA 2013 human urine urine infection CHS 31 KpI CG258 258 ybt - - - 3 299 ICEKp2 absent 13 NA NA NA1438738.3 PATRIC USA 2013 human urine urine infection CHS 32 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438740.3 PATRIC USA 2013 human urine urine infection CHS 34 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438742.3 PATRIC USA 2013 human urine urine infection CHS 36 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438744.3 PATRIC USA 2013 human urine urine infection CHS 38 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438746.3 PATRIC USA 2013 human urine urine infection CHS 40 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438747.3 PATRIC USA 2013 human urine urine infection CHS 41 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes "yes - clbB, clbO"1438748.3 PATRIC USA 2013 human urine urine infection CHS 42 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438751.3 PATRIC USA 2013 human urine urine infection CHS 45 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438752.3 PATRIC USA 2013 human urine urine infection CHS 46 KpI CG258 258 ybt clb - - 3 248 ICEKp10 present 17 3 yes yes - clbB1438758.3 PATRIC USA 2013 human urine urine infection CHS 52 KpI CG258 258 ybt clb - - 3 249 ICEKp10 present 17 3 yes yes - clbB1438763.3 PATRIC USA 2013 human urine urine infection CHS 57 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438764.3 PATRIC USA 2013 human urine urine infection CHS 58 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438765.3 PATRIC USA 2013 human urine urine infection CHS 59 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438766.3 PATRIC USA 2013 human urine urine infection CHS 60 KpI CG258 258 ybt clb - - 3 241 ICEKp10 present 17 3 yes ?1438767.3 PATRIC USA 2013 human urine urine infection CHS 61 KpI CG258 258 ybt clb - - 3 241 ICEKp10 present 17 3 yes "yes - clbB, clbH"1438768.3 PATRIC USA 2013 human urine urine infection CHS 62 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438769.3 PATRIC USA 2013 human urine urine infection CHS 63 KpI CG258 258 ybt clb - - 3 241 ICEKp10 present 17 3 yes "yes - clbB, clbH"1438770.3 PATRIC USA 2013 human urine urine infection CHS 64 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438771.3 PATRIC USA 2013 human urine urine infection CHS 65 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438774.3 PATRIC USA 2013 human urine urine infection CHS 70 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438775.3 PATRIC USA 2013 human urine urine infection CHS 71 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438776.3 PATRIC USA 2013 human urine urine infection CHS 72 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438777.3 PATRIC USA 2013 human urine urine infection CHS 73 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438778.3 PATRIC USA 2013 human urine urine infection CHS 74 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438779.3 PATRIC USA 2013 human urine urine infection CHS 75 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438780.3 PATRIC USA 2013 human urine urine infection CHS 76 KpI CG258 258 ybt clb - - 3 255 ICEKp10 present 17 3 yes yes - clbB1438781.3 PATRIC USA 2013 human urine urine infection CHS 80 KpI CG258 258 ybt clb - - 3 250 ICEKp10 present 17 3 yes yes - clbB573.1351 PATRIC USA 2012 human wound wound infection MRSN6920 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1087441.3 PATRIC USA 2011 human wound wound infection KPNIH2 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1409965.3 PATRIC USA 2012 human wound wound infection MRSN 6902 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438804.3 PATRIC USA unknown human wound wound infection UCI 59 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438808.3 PATRIC USA unknown human wound wound infection UCI 63 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1328404.3 PATRIC USA 2009 human foot culture wound unknown BIDMC 10 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1438712.3 PATRIC USA 2013 human groin wound wound infection CHS 06 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 yes yes - clbB1438756.3 PATRIC USA 2013 human wound wound infection CHS 50 KpI CG258 258 ybt clb - - 3 241 ICEKp10 present 17 3 yes "yes - clbB, clbH"1438796.3 PATRIC USA 2013 human wound wound infection MGH 73 KpI CG258 258 ybt clb - - 3 251 ICEKp10 present 17 3 no no1438802.3 PATRIC USA unknown human wound wound infection UCI 55 KpI CG258 258 ybt clb - - 3 268 ICEKp10 present 17 3 no no72407.76 PATRIC USA 2013 unknown perirectal swab intestinal unknown KPNIH32 KpI CG258 258 ybt clb - - 3 252 ICEKp10 present 17 3 yes yes - clbB72407.8 PATRIC unknown unknown unknown unknown unknown unknown ATCC 13883 KpI CG258 258 - - - - NA NA NA NA NA NA NA NA1185420.3 PATRIC Italy unknown unknown unknown unknown unknown ST258-K28BO KpI CG258 258 - - - - NA NA NA NA NA NA NA NA573.1422 PATRIC Italy 2006 human unknown unknown unknown 52BG KpI CG36 268 - - - - NA NA NA NA NA NA NA NA1400173.3 PATRIC USA unknown human urine urine infection UCI 20 KpI CG36 268 - - - - NA NA NA NA NA NA NA NA573.136 PATRIC Malaysia 2013 unknown blood blood_sterile infection 349 KpI CG36 268 ybt - - - 4 208 ICEKp3 absent 9 NA NA NA573.1436 PATRIC Italy 2011 human unknown unknown unknown 69BO KpI n/a 277 - - - - NA NA NA NA NA NA NA NA573.1676 PATRIC unknown 2014 human unknown unknown unknown UCI94 KpI n/a 277 - - - - NA NA NA NA NA NA NA NA573.1686 PATRIC USA 2013 human wound wound infection 1331_KPNE KpI n/a 278 - - - - NA NA NA NA NA NA NA NA573.139 PATRIC Italy 2012 human unknown unknown unknown 17PV KpI ST307 307 - - - - NA NA NA NA NA NA NA NA573.1466 PATRIC Italy 2012 human unknown unknown unknown 9PV KpI ST307 307 - - - - NA NA NA NA NA NA NA NA573.1383 PATRIC Italy 2012 human unknown unknown unknown 10PV KpI ST307 307 ybt - - - 3 157 ICEKp3 absent 9 NA NA NA573.141 PATRIC Italy 2013 human unknown unknown unknown 40AVR KpI ST307 307 ybt - - - 3 158 ICEKp3 absent 9 NA NA NA1328375.3 PATRIC USA 2012 human urine urine infection MGH 43 KpI ST307 307 - - - - NA NA NA NA NA NA NA NA573.1736 PATRIC unknown 2014 human unknown unknown unknown MGH83 KpI CG37 309 - - - - NA NA NA NA NA NA NA NA573.149 PATRIC Italy 2009 human unknown unknown unknown 53BG KpI n/a 321 - - - - NA NA NA NA NA NA NA NA573.167 PATRIC unknown 2014 human unknown unknown unknown UCI76 KpI CG322 322 - - - - NA NA NA NA NA NA NA NA573.1695 PATRIC USA 2012 human eye eye infection 436_KPNE KpI CG323 323 - - - - NA NA NA NA NA NA NA NA573.1368 PATRIC Brazil 2013 human rectal swab intestinal carriage CCBH13327 KpI CG323 323 - - - - NA NA NA NA NA NA NA NA573.1408 PATRIC Italy 2013 human unknown unknown unknown 37AVR KpI CG323 323 - - - - NA NA NA NA NA NA NA NA573.1417 PATRIC Italy 2013 human unknown unknown unknown 47AVR KpI CG323 323 - - - - NA NA NA NA NA NA NA NA72407.91 PATRIC South Africa unknown human unknown unknown unknown ST323:941530379 KpI CG323 323 - - - - NA NA NA NA NA NA NA NA573.1885 PATRIC Israel 2005 human blood blood_sterile infection B199 KpI n/a 327 ybt - - - 3 96 ICEKp4 absent 10 NA NA NA573.1682 PATRIC USA 2013 human BAL respiratory infection 1183_KPNE KpI n/a 327 - - - - NA NA NA NA NA NA NA NA1226680.3 PATRIC unknown unknown unknown NCIB 418 unknown unknown Ecl8 KpI CG65 375 - - iro iuc NA NA NA NA NA NA NA NA573.148 PATRIC Germany 2014 unknown unknown unknown unknown DSM 2026 KpI CG65 375 - - iro iuc NA NA NA NA NA NA NA NA1049565.4 PATRIC unknown unknown unknown unknown unknown unknown KCTC 2242 KpI CG65 375 - - iro iuc NA NA NA NA NA NA NA NA1379689.3 PATRIC unknown unknown unknown unknown unknown unknown T69 KpI CG65 375 ybt - iro iuc ? 12 ? absent 5 NA NA NA573.1715 PATRIC USA 2013 human blood blood_sterile infection 913_KPNE KpI CG380 380 ybt - iro iuc ? 143 ? ? 14 NA NA NA573.1716 PATRIC USA 2013 human BAL respiratory unknown 930_KPNE KpI CG380 380 ybt - iro iuc ? 143 ? ? 14 NA NA NA573.1886 PATRIC USA 2013 human BAL respiratory unknown 912_KPNE KpI CG380 380 ybt - iro iuc ? 143 ? ? 14 NA NA NA1379687.3 PATRIC unknown unknown unknown unknown unknown unknown BJ1-GA KpI CG380 380 ybt clb iro iuc ? 1 ICEKp10 present 12 1 ? ?1328371.3 PATRIC USA 2012 human bile bile infection MGH 35 KpI CG147 392 - - - - NA NA NA NA NA NA NA NA573.1372 PATRIC Colombia 2012 human Bodily fluid fluid unknown 6234 KpI CG147 392 - - - - NA NA NA NA NA NA NA NA573.1636 PATRIC unknown 2014 human unknown unknown unknown MGH89 KpI CG147 392 - - - - NA NA NA NA NA NA NA NA72407.79 PATRIC USA 2013 human urine urine infection KPNIH31 KpI CG147 392 - - - - NA NA NA NA NA NA NA NA573.1409 PATRIC Italy 2013 human unknown unknown unknown 39AVR KpI CG258 395 - - - - NA NA NA NA NA NA NA NA573.1416 PATRIC Italy 2013 human unknown unknown unknown 46AVR KpI CG258 395 - - - - NA NA NA NA NA NA NA NA1074486.3 PATRIC Netherlands 2011 human unknown unknown unknown 1191100241 KpI CG258 395 - - - - NA NA NA NA NA NA NA NA573.1352 PATRIC USA 2012 human urine urine infection unknown KpI CG258 395 - - - - NA NA NA NA NA NA NA NA573.1365 PATRIC USA 2006 human wound wound infection 101488 KpI CG258 395 - - - - NA NA NA NA NA NA NA NA573.1535 PATRIC USA 2014 human unknown unknown unknown CHS121 KpI n/a 405 - - - - NA NA NA NA NA NA NA NA573.1406 PATRIC Italy 2013 human unknown unknown unknown 34AVR KpI n/a 405 ybt - - - 3 160 ? absent no lineage NA NA NA573.1448 PATRIC Italy 2012 human unknown unknown unknown 82RE KpI n/a 405 ybt - - - 1 312 ? present no lineage NA NA NA573.1433 PATRIC Italy 2013 human unknown unknown unknown 66BO KpI n/a 416 - - - - NA NA NA NA NA NA NA NA1306950.3 PATRIC China 2012 human blood blood_sterile infection unknown KpII n/a 421 - - - - NA NA NA NA NA NA NA NA573.1524 PATRIC USA 2014 human unknown unknown unknown CHS107 KpI n/a 432 - - - - NA NA NA NA NA NA NA NA573.1491 PATRIC USA 2014 human sputum respiratory infection ST-437 KpI CG258 437 - - - - NA NA NA NA NA NA NA NA1400170.3 PATRIC USA unknown human urine urine infection UCI 17 KpI CG258 437 ybt clb - - 3 295 ICEKp10 present 17 3 yes "yes - clbC, clbF, clbQ"1123862.3 PATRIC Brazil 2009 human blood blood_sterile infection Kp13 KpI n/a 442 ybt - - - 4 223 ICEKp5 absent no lineage NA NA NA573.1662 PATRIC unknown 2014 human unknown unknown unknown BIDMC88 KpIII n/a 454 - - - - NA NA NA NA NA NA NA NA573.1692 PATRIC USA 2012 human sputum respiratory infection 570_KPNE KpI n/a 461 - - - - NA NA NA NA NA NA NA NA573.1405 PATRIC Italy 2013 human unknown unknown unknown 32AVR KpI CG35 466 ybt - - - 3 94 ICEKp4 absent 10 NA NA NA573.1425 PATRIC Italy 2012 human unknown unknown unknown 55BG KpI CG35 466 ybt - - - 3 100 ICEKp4 absent 10 NA NA NA1328372.3 PATRIC USA 2012 human urine urine infection MGH 36 KpI CG35 466 ybt - - - 3 95 ICEKp4 absent 10 NA NA NA573.1376 PATRIC Australia 2014 human urine urine infection ST485 KpI CG45 485 ybt - - - 4 302 ICEKp2 absent 13 NA NA NA1276653.3 PATRIC unknown unknown human unknown unknown unknown 700603 KpII n/a 489 - - - - NA NA NA NA NA NA NA NA573.1373 PATRIC Malaysia 2014 environment Water from farm environment NA GN8 KpI CG490 490 - - - - NA NA NA NA NA NA NA NA573.1355 PATRIC unknown unknown human unknown unknown unknown KPPR1 KpI n/a 493 ybt - iro - 1 321 ICEKp1 absent 2 NA NA NA72407.38 PATRIC USA 2000 unknown unknown unknown unknown VK055 KpI n/a 493 ybt - iro - 1 321 ICEKp1 absent 2 NA NA NA1290996.3 PATRIC Italy 2011 human blood blood_sterile infection KP3-S KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1413253.3 PATRIC Italy 2011 human blood blood_sterile infection KPB-2 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1413252.3 PATRIC Italy 2011 human pleural fluid respiratory infection KPB-1 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1379 PATRIC Italy 2012 human unknown unknown unknown 102BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.138 PATRIC Italy 2012 human unknown unknown unknown 101BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1381 PATRIC Italy 2012 human unknown unknown unknown 103BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1382 PATRIC Italy 2012 human unknown unknown unknown 104BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1402 PATRIC Italy 2012 human unknown unknown unknown 29BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1403 PATRIC Italy 2012 human unknown unknown unknown 30BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1404 PATRIC Italy 2013 human unknown unknown unknown 31AVR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1412 PATRIC Italy 2013 human unknown unknown unknown 42AVR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1413 PATRIC Italy 2013 human unknown unknown unknown 43AVR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1414 PATRIC Italy 2013 human unknown unknown unknown 44AVR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1418 PATRIC Italy 2013 human unknown unknown unknown 48AVR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1428 PATRIC Italy 2011 human unknown unknown unknown 58BG KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1441 PATRIC Italy 2011 human unknown unknown unknown 74RE KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1452 PATRIC Italy 2011 human unknown unknown unknown 86SGR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1453 PATRIC Italy 2011 human unknown unknown unknown 87SGR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1454 PATRIC Italy 2011 human unknown unknown unknown 88SGR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1455 PATRIC Italy 2011 human unknown unknown unknown 89SGR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1456 PATRIC Italy 2011 human unknown unknown unknown 90SGR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1463 PATRIC Italy 2012 human unknown unknown unknown 97SGR KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1294139.3 PATRIC Italy 2011 unknown blood blood_sterile infection KP4-R KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1294140.3 PATRIC Italy 2010 unknown blood blood_sterile infection KP1-I KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1294141.3 PATRIC Italy 2010 unknown rectal swab intestinal unknown KP2-R KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1467 PATRIC unknown unknown unknown unknown unknown unknown IND1 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1468 PATRIC unknown unknown unknown unknown unknown unknown IND3 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1469 PATRIC unknown unknown unknown unknown unknown unknown NAIVER KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.147 PATRIC unknown unknown unknown unknown unknown unknown IND2 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1471 PATRIC unknown unknown unknown unknown unknown unknown REV1 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1472 PATRIC unknown unknown unknown unknown unknown unknown REV2 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1473 PATRIC unknown unknown unknown unknown unknown unknown REV3 KpI CG258 512 - - - - NA NA NA NA NA NA NA NA573.1474 PATRIC unknown unknown unknown unknown unknown unknown NAIVEI KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1185418.3 PATRIC Italy unknown unknown unknown unknown unknown ST512-K30BO KpI CG258 512 - - - - NA NA NA NA NA NA NA NA1294138.3 PATRIC Italy 2011 human urine urine infection KP5-R KpI CG258 512 - - - - NA NA NA NA NA NA NA NA72407.81 PATRIC Germany 2011 human blood blood_sterile infection 234-12 KpI n/a 514 - - - - NA NA NA NA NA NA NA NA1400165.3 PATRIC USA 2012 human urine urine infection BIDMC 47 KpI CG540 540 - - - - NA NA NA NA NA NA NA NA1438704.3 PATRIC USA 2013 human sputum respiratory infection BWH 46 KpI CG34 592 - - iro iuc NA NA NA NA NA NA NA NA1328395.3 PATRIC USA unknown human blood blood_sterile infection UCICRE 10 KpIII n/a 596 - - - - NA NA NA NA NA NA NA NA573.1659 PATRIC unknown 2014 human unknown unknown unknown MGH126 KpI n/a 607 - - - - NA NA NA NA NA NA NA NA573.1655 PATRIC unknown 2014 human unknown unknown unknown MGH118 KpI n/a 628 - - - - NA NA NA NA NA NA NA NA1400168.3 PATRIC USA 2013 human urine urine infection BIDMC 52 KpI n/a 628 ybt - - - 3 108 ICEKp4 absent 10 NA NA NA573.1651 PATRIC unknown 2014 human unknown unknown unknown MGH114 KpIII n/a 641 - - - - NA NA NA NA NA NA NA NA1400171.3 PATRIC USA unknown human urine urine infection UCI 18 KpIII n/a 641 - - - - NA NA NA NA NA NA NA NA1328425.3 PATRIC USA 2012 human blood blood_sterile infection BIDMC 36 KpI CG661 661 - - - - NA NA NA NA NA NA NA NA1438803.3 PATRIC USA unknown human sputum respiratory infection UCI 56 KpI n/a 678 - - - - NA NA NA NA NA NA NA NA573.1887 PATRIC USA 2013 human sputum respiratory infection 1335_KPNE KpIII n/a 681 - - - - NA NA NA NA NA NA NA NA573.1495 PATRIC Malaysia 2013 Food Chilli Food NA CH4 KpIII n/a 697 - - - - NA NA NA NA NA NA NA NA573.1637 PATRIC unknown 2014 human unknown unknown unknown MGH90 KpI n/a 784 - - - - NA NA NA NA NA NA NA NA573.168 PATRIC USA 2013 human sputum respiratory infection 1012_KPNE KpI n/a 846 - - - - NA NA NA NA NA NA NA NA573.1687 PATRIC USA 2013 human sputum respiratory infection 1010_KPNE KpI n/a 846 - - - - NA NA NA NA NA NA NA NA1400176.3 PATRIC USA unknown human urine urine infection UCI 25 KpI n/a 873 - - - - NA NA NA NA NA NA NA NA573.15 PATRIC USA 2010 human urine urine infection CAV1344 KpI n/a 941 - - - - NA NA NA NA NA NA NA NA573.1388 PATRIC Italy 2012 human unknown unknown unknown 15PV KpI n/a 976 ybt - - - 1 146 ICEKp5 absent 14 NA NA NA573.1668 PATRIC unknown 2013 human unknown unknown unknown UCI70 KpI n/a 997 - - - - NA NA NA NA NA NA NA NA573.1387 PATRIC Italy 2012 human unknown unknown unknown 14PV KpI n/a 1079 - - - - NA NA NA NA NA NA NA NA1328377.3 PATRIC USA 2012 human urine urine infection MGH 45 KpI CG258 1084 - - - - NA NA NA NA NA NA NA NA1455605.3 PATRIC USA 2004 human peri-anal swab culture intestinal carriage 7699 KpI CG17/20 1123 - - - - NA NA NA NA NA NA NA NA573.1445 PATRIC Italy 2012 human unknown unknown unknown 78RE KpI n/a 1164 - - - - NA NA NA NA NA NA NA NA1328417.3 PATRIC USA 2012 human urine urine infection BIDMC 22 KpI n/a 1189 - - - - NA NA NA NA NA NA NA NA1328394.3 PATRIC USA unknown human urine urine infection UCICRE 8 KpI CG37 1198 - - - - NA NA NA NA NA NA NA NA1438708.3 PATRIC USA 2013 human urine urine infection CHS 02 KpI CG258 1199 ybt clb - - 3 246 ICEKp10 present 17 3 yes yes - clbB1177153.3 PATRIC China 2010 environment soil environment NA LZ KpI n/a 1222 - - - - NA NA NA NA NA NA NA NA573.1432 PATRIC Italy 2013 human unknown unknown unknown 65BO KpI n/a 1243 - - - - NA NA NA NA NA NA NA NA573.1443 PATRIC Italy 2012 human unknown unknown unknown 76RE KpI n/a 1243 - - - - NA NA NA NA NA NA NA NA573.1362 PATRIC USA 2013 human urine urine infection FDAARGOS_84 KpI CG490 1263 - - - - NA NA NA NA NA NA NA NA1316939.3 PATRIC China unknown environment soil environment NA G5-2 KpI CG29 1271 - - - - NA NA NA NA NA NA NA NA1316938.3 PATRIC China unknown unknown unknown unknown unknown ATCC 25955 KpI CG29 1271 - - - - NA NA NA NA NA NA NA NA1284833.4 PATRIC USA 2004 human stool intestinal carriage KP-7 KpI CG36 1272 - - - - NA NA NA NA NA NA NA NA1284834.3 PATRIC USA 2004 human stool intestinal carriage KP-11 KpI CG36 1272 - - - - NA NA NA NA NA NA NA NA573.1461 PATRIC Italy 2012 human unknown unknown unknown 95SGR KpI CG230 1307 ybt - - - 4 142 ICEKp5 absent 14 NA NA NA1357295.3 PATRIC India 2010 environment nitro-aromatics containing industrial waste water NA NA EGD-HP19 KpI CG322 1377 - - - - NA NA NA NA NA NA NA NA1279040.3 PATRIC Malaysia 2009 human blood blood_sterile infection PR04 KpI n/a 1402 - - - - NA NA NA NA NA NA NA NA573.1555 PATRIC USA 2014 human unknown unknown unknown CHS145 KpI n/a 1411 - - - - NA NA NA NA NA NA NA NA1328419.3 PATRIC USA 2012 human urine urine infection BIDMC 24 KpI n/a 1430 - - - - NA NA NA NA NA NA NA NA1328385.3 PATRIC USA 2012 human blood blood_sterile infection BWH 30 KpI n/a 1431 - - - - NA NA NA NA NA NA NA NA1328364.3 PATRIC USA 2012 human urine urine infection MGH 19 KpI n/a 1432 - - - - NA NA NA NA NA NA NA NA1328365.3 PATRIC USA 2012 human respiratory respiratory infection MGH 20 KpIII n/a 1433 ybt - - - 1 224 ICEKp11 absent no lineage NA NA NA1328374.3 PATRIC USA 2012 human urine urine infection MGH 40 KpIII n/a 1434 - - - - NA NA NA NA NA NA NA NA1328376.3 PATRIC USA 2012 human respiratory respiratory infection MGH 44 KpII n/a 1435 - - - - NA NA NA NA NA NA NA NA1328380.3 PATRIC USA 2012 human urine urine infection MGH 48 KpI n/a 1436 - - - - NA NA NA NA NA NA NA NA1328397.3 PATRIC USA unknown human sputum respiratory infection UCICRE 14 KpII n/a 1437 - - - - NA NA NA NA NA NA NA NA1400179.3 PATRIC USA unknown human urine urine infection UCI 34 KpI CG34 1444 - - - - NA NA NA NA NA NA NA NA72407.101 PATRIC South Africa unknown human art line unknown unknown ST1478:939997103 KpIII n/a 1478 - - - - NA NA NA NA NA NA NA NA72407.77 PATRIC USA 2013 human perirectal swab intestinal carriage KPNIH29 KpI n/a 1518 - - - - NA NA NA NA NA NA NA NA573.1666 PATRIC unknown 2014 human unknown unknown unknown BIDMC95 KpII n/a 1535 - - - - NA NA NA NA NA NA NA NA1328373.3 PATRIC USA 2012 human urine urine infection MGH 39 KpI CG230 1583 ybt - - - 3 210 ICEKp12 absent 9 NA NA NA573.1395 PATRIC Italy 2012 human unknown unknown unknown 22PV KpI n/a 1625 ybt - - - 3 113 ICEKp4 absent 10 NA NA NA573.1421 PATRIC Italy 2007 human unknown unknown unknown 51BG KpI n/a 1626 - - - - NA NA NA NA NA NA NA NA573.1431 PATRIC Italy 2011 human unknown unknown unknown 63BG KpI n/a 1627 - - - - NA NA NA NA NA NA NA NA573.1434 PATRIC Italy 2013 human unknown unknown unknown 67BO KpI n/a 1628 ybt - - - 4 153 ICEKp5 absent 14 NA NA NA573.1444 PATRIC Italy 2012 human unknown unknown unknown 77RE KpI n/a 1629 - - - - NA NA NA NA NA NA NA NA573.1462 PATRIC Italy 2012 human unknown unknown unknown 96SGR KpI n/a 1630 ybt - - - 4 285 ICEKp12 present 16 NA NA NA573.1393 PATRIC Italy 2012 human unknown unknown unknown 20PV KpI n/a 1631 - - - - NA NA NA NA NA NA NA NA72407.88 PATRIC South Africa 2012 human abdomen intestinal infection ST2017:950118422 KpI CG43 2017 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA72407.95 PATRIC South Africa unknown human tracheal fluid respiratory infection ST2017:950142398 KpI CG43 2017 ybt - - - 3 183 ICEKp3 absent 9 NA NA NA72407.94 PATRIC South Africa 2012 human urine urine infection ST2017:950117510 KpI CG43 2017 ybt - - - 3 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED573.1354 PATRIC Malaysia 2013 human skin swab skin unknown 325 KpI CG66 2039 ybt clb iro iuc 3 40 ICEKp10 present 12 1 ? ?573.1477 PATRIC Malaysia 2012 environment soil environment NA 1kgm KpII n/a 2045 - - - - NA NA NA NA NA NA NA NA573.1645 PATRIC unknown 2014 human unknown unknown unknown MGH98 KpI n/a 2072 - - - - NA NA NA NA NA NA NA NA573.1602 PATRIC USA 2014 human unknown unknown unknown CHS206 KpI n/a 2121 - - - - NA NA NA NA NA NA NA NA573.1693 PATRIC USA 2012 human urine urine infection 187_KPNE KpI n/a 2333 - - - - NA NA NA NA NA NA NA NA1438799.3 PATRIC USA 2013 human bile bile infection MGH 76 KpIII n/a 5007 - - - - NA NA NA NA NA NA NA NA573.1494 PATRIC Malaysia 2013 unknown Bitter gout unknown unknown B1 KpIII n/a 5008 - - - - NA NA NA NA NA NA NA NA573.1492 PATRIC unknown 1956 unknown unknown unknown unknown CICC10011 KpIII n/a 5021 - - - - NA NA NA NA NA NA NA NA1455603.3 PATRIC USA 2003 human peri-anal swab culture intestinal carriage 4541-2 KpI CG36 5022 - - - - NA NA NA NA NA NA NA NA1451263.3 PATRIC Singapore 2013 human rectal swab intestinal carriage JT4 KpI n/a 5023 - - - - NA NA NA NA NA NA NA NA573.1639 PATRIC unknown 2014 human unknown unknown unknown MGH92 KpIII n/a 5034 - - - - NA NA NA NA NA NA NA NA573.1642 PATRIC unknown 2014 human unknown unknown unknown MGH96 KpII n/a 5035 - - - - NA NA NA NA NA NA NA NA573.1649 PATRIC unknown 2014 human unknown unknown unknown MGH112 KpI n/a 5037 - - - - NA NA NA NA NA NA NA NA573.1656 PATRIC unknown 2014 human unknown unknown unknown MGH123 KpII n/a 5038 - - - - NA NA NA NA NA NA NA NA573.1664 PATRIC unknown 2014 human unknown unknown unknown BIDMC90 KpIII n/a 5039 - - - - NA NA NA NA NA NA NA NA573.1667 PATRIC unknown 2014 human unknown unknown unknown BIDMC96 KpI n/a 5040 - - - - NA NA NA NA NA NA NA NA1232392.6 PATRIC Spain 2012 human blood blood_sterile infection KpO3210 KpI n/a 5041 - - - - NA NA NA NA NA NA NA NA573.1572 PATRIC USA 2014 human unknown unknown unknown CHS162 KpI n/a 5042 - - - - NA NA NA NA NA NA NA NA573.1582 PATRIC USA 2014 human unknown unknown unknown CHS174 KpI CG35 5043 ybt - - - plasmid 37 plasmid absent 4 NA NA NA573.1607 PATRIC USA 2014 human unknown unknown unknown CHS211 KpI CG258 5044 - - - - NA NA NA NA NA NA NA NA573.1749 PATRIC USA 2014 human unknown unknown unknown CHS136 KpI n/a 5045 - - - - NA NA NA NA NA NA NA NA573.1681 PATRIC USA 2013 human urine urine infection 1098_KPNE KpI n/a 5046 ybt - - - plasmid 221 plasmid absent 4 NA NA NA573.1683 PATRIC USA 2013 human urine urine infection 1294_KPNE KpII n/a 5047 - - - - NA NA NA NA NA NA NA NA573.1685 PATRIC USA 2013 human fluid unknown infection 1239_KPNE KpI CG253 5048 - - - - NA NA NA NA NA NA NA NA573.169 PATRIC USA 2012 human urine urine infection 194_KPNE KpI n/a 5049 - - - - NA NA NA NA NA NA NA NA573.1691 PATRIC USA 2012 human BAL respiratory unknown 500_KPNE KpI n/a 5050 ybt - - - 1 150 ICEKp5 ? 14 NA NA NA573.1696 PATRIC USA 2012 human sputum respiratory unknown 501_KPNE KpI n/a 5050 ybt - - - 1 150 ICEKp5 ? 14 NA NA NA573.1708 PATRIC USA 2013 human urine urine infection 887_KPNE KpI n/a 5050 ybt - - - ? 150 ICEKp5 ? 14 NA NA NA573.1697 PATRIC USA 2013 human sputum respiratory infection 648_KPNE KpI CG34 5052 - - - - NA NA NA NA NA NA NA NA573.1698 PATRIC USA 2013 human sputum respiratory infection 731_KPNE KpI CG661 5053 - - - - NA NA NA NA NA NA NA NA573.1702 PATRIC USA 2013 human tracheal aspirate respiratory infection 780_KPNE KpIII n/a 5054 - - - - NA NA NA NA NA NA NA NA573.1704 PATRIC USA 2013 human tracheal aspirate respiratory infection 833_KPNE KpIII n/a 5054 - - - - NA NA NA NA NA NA NA NA573.1705 PATRIC USA 2013 human tracheal aspirate respiratory infection 835_KPNE KpIII n/a 5054 - - - - NA NA NA NA NA NA NA NA573.1706 PATRIC USA 2013 human tracheal aspirate respiratory infection 836_KPNE KpIII n/a 5054 - - - - NA NA NA NA NA NA NA NA573.1711 PATRIC USA 2013 human tracheal aspirate respiratory infection 834_KPNE KpIII n/a 5054 - - - - NA NA NA NA NA NA NA NA573.1712 PATRIC USA 2013 human tracheal aspirate respiratory infection 837_KPNE KpIII n/a 5054 - - - - NA NA NA NA NA NA NA NA573.1707 PATRIC USA 2013 human urine urine infection 845_KPNE KpI n/a 5055 - - - - NA NA NA NA NA NA NA NA573.1714 PATRIC USA 2013 human urine urine infection 865_KPNE KpII n/a 5056 - - - - NA NA NA NA NA NA NA NA573.1717 PATRIC USA 2012 human blood blood_sterile infection 98_KPNE KpI CG34 5057 - - iro iuc NA NA NA NA NA NA NA NA1199150.3 PATRIC USA 2005 "Southern green stink bug, Nezara viridula" unknown unknown unknown KP5-1 KpIII n/a 5058 - - - - NA NA NA NA NA NA NA NA573.1427 PATRIC Italy 2011 human unknown unknown unknown 57BG KpI CG258 5060 ybt - - - 4 300 ICEKp2 absent 13 NA NA NA573.145 PATRIC Italy 2012 human unknown unknown unknown 84RE KpI CG322 5061 - - - - NA NA NA NA NA NA NA NA573.1451 PATRIC Italy 2012 human unknown unknown unknown 85RE KpI CG37 5062 - - - - NA NA NA NA NA NA NA NA573.1458 PATRIC Italy 2012 human unknown unknown unknown 92SGR KpI n/a 5063 - - - - NA NA NA NA NA NA NA NA1236531.3 PATRIC unknown unknown unknown unknown unknown unknown JCM 1662 KpI CG3 5064 ybt clb - - 4 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED1316582.3 PATRIC unknown unknown unknown unknown unknown unknown 45T1-2A KpII n/a 5066 - - - - NA NA NA NA NA NA NA NA573.1493 PATRIC China 2007 Food rugao ham Food NA yzusk-4 KpI n/a 5116 - - - - NA NA NA NA NA NA NA NA573.1489 PATRIC Malaysia 2014 human Pus abscess_pus infection 223/14 KpIII n/a 5227 - - - - NA NA NA NA NA NA NA NA1328381.3 PATRIC USA 2011 human tissue tissue infection BWH2 n/a 5230 ybt - - - 2/3? 183 ICEKp3 absent 9 NA NA NA1400164.3 PATRIC USA 2013 human urine urine infection BIDMC 46b KpI n/a 5233 - - - - NA NA NA NA NA NA NA NA1400177.3 PATRIC USA unknown human urine urine infection UCI 26 KpI n/a 5234 - - - - NA NA NA NA NA NA NA NA1438700.3 PATRIC USA 2013 human urine urine infection BIDMC 61 KpIII n/a 5235 - - - - NA NA NA NA NA NA NA NA1438791.3 PATRIC USA 2013 human urine urine infection MGH 68 KpIII n/a 5236 - - - - NA NA NA NA NA NA NA NA1438801.3 PATRIC USA 2013 human urine urine infection MGH 80 KpIII n/a 5237 - - - - NA NA NA NA NA NA NA NA1438805.3 PATRIC USA unknown human urine urine infection UCI 60 KpI n/a 5238 - - - - NA NA NA NA NA NA NA NA573.1366 PATRIC USA 2007 human wound wound infection 101712 KpI CG14/15 5239 ybt - - - 3 17 ICEKp4 absent 10 NA NA NA72407.83 PATRIC China 2013 panda giant panda feces panda faeces carriage HKUOPLC KpII n/a 5292 - - - - NA NA NA NA NA NA NA NAERR276938 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR276940 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR276968 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR276983 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NAERR276950 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG14/15 15 ybt - - - 1 28 ICEKp4 absent 10 NA NA NAERR276953 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG17/20 16 - - - - NA NA NA NA NA NA NA NAERR276951 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG17/20 17 ybt - - - 3 277 ICEKp12 present 16 NA NA NAERR276981 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG17/20 17 ybt - - - 3 231 ICEKp11 present 15 NA NA NAERR276987 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG17/20 22 - - - - NA NA NA NA NA NA NA NAERR276927 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR276949 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG35 35 ybt - - - 4 180 ICEKp3 absent 9 NA NA NAERR276979 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG35 35 ybt - - iuc 4 186 ICEKp3 absent 9 NA NA NAERR276921 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG36 36 - - - - NA NA NA NA NA NA NA NAERR276926 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR276937 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR276962 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR276966 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG45 45 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR276936 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI ST48 48 ybt clb - - 3 282 ICEKp10 present 17 3 yes noERR276980 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG86 86 ybt - iro iuc 3 205 ICEKp3 absent 9 NA NA NAERR276975 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG43 101 - - - - NA NA NA NA NA NA NA NAERR276984 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG152 105 ybt - - - 1 134 ICEKp5 absent 14 NA NA NAERR276988 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG152 105 ybt - - - 1 134 ICEKp5 absent 14 NA NA NAERR276943 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG147 147 - - - - NA NA NA NA NA NA NA NAERR276923 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 234 - - - - NA NA NA NA NA NA NA NAERR276947 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI ST307 307 - - - - NA NA NA NA NA NA NA NAERR276989 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG37 309 - - - - NA NA NA NA NA NA NA NAERR276922 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG322 322 - - - - NA NA NA NA NA NA NA NAERR276925 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 348 - - - - NA NA NA NA NA NA NA NAERR276982 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG65 375 - - iro iuc NA NA NA NA NA NA NA NAERR276971 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG380 380 ybt - iro iuc 1 279 ICEKp12 present 16 NA NA NAERR276972 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 432 - - - - NA NA NA NA NA NA NA NAERR276930 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG258 437 - - - - NA NA NA NA NA NA NA NAERR276942 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276945 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276946 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276948 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276952 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276955 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276956 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276957 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276958 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276959 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276960 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276961 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276963 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276965 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276967 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG490 490 - - - - NA NA NA NA NA NA NA NAERR276944 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR276954 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG874 874 - - - - NA NA NA NA NA NA NA NAERR276939 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 940 - - - - NA NA NA NA NA NA NA NAERR276969 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 1310 - - - - NA NA NA NA NA NA NA NAERR276977 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 1686 - - - - NA NA NA NA NA NA NA NAERR276974 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG37 1779 - - - - NA NA NA NA NA NA NA NAERR276928 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpIII n/a 5021 - - - - NA NA NA NA NA NA NA NAERR276924 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpIII n/a 5071 - - - - NA NA NA NA NA NA NA NAERR276929 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG253 5072 ybt - - - 4 135 ICEKp5 absent 14 NA NA NAERR276964 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG253 5072 ybt - - - 4 135 ICEKp5 absent 14 NA NA NAERR276931 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpIII n/a 5073 - - - - NA NA NA NA NA NA NA NAERR276932 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 5074 ybt - - - 3 119 ICEKp4 absent 10 NA NA NAERR276933 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpIII n/a 5075 - - - - NA NA NA NA NA NA NA NAERR276934 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI CG45 5076 ybt - - - 1 78 ICEKp4 absent 10 NA NA NAERR276935 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpII n/a 5077 - - - - NA NA NA NA NA NA NA NAERR276941 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpIII n/a 5078 - - - - NA NA NA NA NA NA NA NAERR276970 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 5080 - - - - NA NA NA NA NA NA NA NAERR276978 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 5080 - - - - NA NA NA NA NA NA NA NAERR276973 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 5081 - - - - NA NA NA NA NA NA NA NAERR276976 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpIII n/a 5082 - - - - NA NA NA NA NA NA NA NAERR276985 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 5084 - - - - NA NA NA NA NA NA NA NAERR276986 Stoesser et al. 2013 UK 2011 human unknown unknown unknown unknown KpI n/a 5085 - - - - NA NA NA NA NA NA NA NASRR1508855 Stoesser et al. 2014 Nepal 2012 human urine urine infection H32 KpI CG258 11 ybt - - - 3 183 ICEKp3 absent 9 NA NA NASRR1508863 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection H1545 KpI CG14/15 14 - - - - NA NA NA NA NA NA NA NASRR1508858 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1247 KpI CG14/15 14 ybt - - - 1 191 ICEKp3 absent 9 NA NA NASRR1508862 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection H1496 KpI CG14/15 14 ybt - - - 1 190 ICEKp3 absent 9 NA NA NASRR1508819 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK1 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508821 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK3 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508822 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK4a KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508823 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK4b KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508824 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK5a KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508825 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK5b KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508826 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK6 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508827 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK7 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508829 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection PMK9 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508831 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK11 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508832 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK12 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508833 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK13a KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508834 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK13b KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508835 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK14 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508836 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK15 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508837 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK16 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508838 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK17 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508839 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK18 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508840 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK19 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508841 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK20a KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508842 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK21a KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508843 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK21b KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508844 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK21c KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508845 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK21d KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508846 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK21e KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508847 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK22 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508848 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK23 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508849 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK24 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508850 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK25 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508851 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK26a KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508852 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK26b KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508853 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H30 KpI CG14/15 15 ybt - - - 1 277 ICEKp12 present 16 NA NA NASRR1508861 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection H1460 KpI CG14/15 15 ybt - - - 1 290 ICEKp12 present 16 NA NA NASRR1508864 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1183 KpI CG34 34 - - - - NA NA NA NA NA NA NA NASRR1508866 Stoesser et al. 2014 Nepal 2011 human Blood or urine blood_sterile infection C1046 KpI ST48 48 - - - - NA NA NA NA NA NA NA NASRR1508881 Stoesser et al. 2014 Nepal 2009 human Blood or urine blood_sterile infection C369 KpI CG147 147 - - - - NA NA NA NA NA NA NA NASRR1508854 Stoesser et al. 2014 Nepal 2012 human sputum respiratory infection H31 KpI CG147 147 - - - - NA NA NA NA NA NA NA NASRR1508857 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1267 KpI CG17/20 336 ybt - - - 1 166 ICEKp9 absent 8 NA NA NASRR1508859 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection H1361 KpI CG17/20 336 ybt - - - 4 230 ICEKp11 present 15 NA NA NASRR1508860 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection H1360 KpI CG17/20 336 ybt - - - 4 230 ICEKp11 present 15 NA NA NASRR1508872 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1263 KpI CG17/20 336 ybt - - - 1 166 ICEKp9 absent 8 NA NA NASRR1508873 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1271 KpI CG17/20 336 ybt - - - 1 167 ICEKp9 absent 8 NA NA NASRR1508874 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1277 KpI CG17/20 336 ybt - - - 1 166 ICEKp9 absent 8 NA NA NASRR1508876 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1265 KpI CG17/20 336 ybt - - - 1 166 ICEKp9 absent 8 NA NA NASRR1508882 Stoesser et al. 2014 Nepal 2008 human Blood or urine blood_sterile infection C5250 KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1508883 Stoesser et al. 2014 Nepal 2008 human Blood or urine blood_sterile infection C5243 KpI CG258 340 - - - - NA NA NA NA NA NA NA NASRR1508865 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection H1438 KpI n/a 478 - - - - NA NA NA NA NA NA NA NASRR1508877 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H1167 KpI n/a 515 - - - - NA NA NA NA NA NA NA NASRR1508820 Stoesser et al. 2014 Nepal 2011 human blood blood_sterile infection H2 KpI n/a 1626 - - - - NA NA NA NA NA NA NA NASRR1508830 Stoesser et al. 2014 Nepal 2012 human blood blood_sterile infection PMK10 KpI CG14/15 5144 ybt - - - 1 290 ICEKp12 present 16 NA NA NAERR713649 Struve et al. USA unknown human urine urine infection C3091 KpI CG14/15 14 ybt clb iroB - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR720260 Struve et al. USA 2011 human respiratory tract respiratory unknown TG21960 KpI CG14/15 15 - - - - NA NA NA NA NA NA NA NAERR720257 Struve et al. USA 1990-1991 unknown unknown unknown unknown TG21569 KpI CG17/20 20 - - - - NA NA NA NA NA NA NA NAERR720254 Struve et al. USA 2007 human blood blood_sterile infection TG12387 KpI CG17/20 22 - - - - NA NA NA NA NA NA NA NAERR706870 Struve et al. Canada 2006 human liver abscess liver infection CAS692 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NAERR712789 Struve et al. Norway 2010 human liver abscess liver infection CAS905 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NAERR712790 Struve et al. Norway 2010 human liver abscess liver infection CAS906 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NAERR699266 Struve et al. USA 2005 human liver abscess liver infection CAS685 KpI CG23 23 ybt clb iro iuc 1 54 ICEKp10 present 1 2 no noERR699269 Struve et al. USA 2005 human liver abscess liver infection CAS687 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 yes noERR712623 Struve et al. Canada 2006 human liver abscess liver infection CAS694 KpI CG23 23 ybt clb iro iuc 1 55 ICEKp10 present 1 2 no noERR712624 Struve et al. Canada 2006 human liver abscess liver infection CAS695 KpI CG23 23 ybt clb iro iuc 1 EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR712625 Struve et al. USA 2007 human liver abscess liver infection CAS699 KpI CG23 23 ybt clb iro iuc 1 46 ICEKp10 present 1 2 no noERR712626 Struve et al. USA 2007 human liver abscess liver infection CAS701 KpI CG23 23 ybt clb iro iuc 1 46 ICEKp10 present 1 2 no noERR712791 Struve et al. Taiwan 1996 human liver abscess liver infection CAS983 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR712792 Struve et al. Taiwan 1996 human liver abscess liver infection CAS984 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR712793 Struve et al. Taiwan 1996 human liver abscess liver infection CAS985 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR712794 Struve et al. Taiwan 1996 human liver abscess liver infection CAS986 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR712899 Struve et al. Taiwan 1996 human liver abscess liver infection CAS987 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR712900 Struve et al. Taiwan 1997 human liver abscess liver infection CAS988 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR713521 Struve et al. USA 2004 human liver abscess liver infection CAS683 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 yes noERR713522 Struve et al. Canada 2005 human liver abscess liver infection CAS691 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR713524 Struve et al. Canada 2005 human liver abscess liver infection CAS690 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR713641 Struve et al. USA 2006 human liver abscess liver infection CAS698 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR713642 Struve et al. Sweden 2008 human liver abscess liver infection CAS726 KpI CG23 23 ybt clb iro iuc 1 58 ICEKp10 present 1 2 no noERR713643 Struve et al. Norway 2008 human liver abscess liver infection CAS727 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 ? ?ERR713644 Struve et al. Denmark 2008 human liver abscess liver infection CAS813 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR718793 Struve et al. Norway 2012 human liver abscess liver infection CAS951 KpI CG23 23 ybt clb iro iuc 1 54 ICEKp10 present 1 2 no noERR712901 Struve et al. South Africa 1996 human pneumonia respiratory infection CAS989 KpI CG23 23 ybt clb iro iuc 1 47 ICEKp10 present 1 2 no noERR712903 Struve et al. South Africa 1997 human pneumonia respiratory infection CAS991 KpI CG23 23 ybt clb iro iuc 1 49 ICEKp10 present 1 2 yes noERR712904 Struve et al. South Africa 1997 human pneumonia respiratory infection CAS992 KpI CG23 23 ybt clb iro iuc ? 47 ICEKp10 present 1 2 ? ?ERR706869 Struve et al. Canada 2005 human liver abscess liver infection CAS689 KpI CG25 25 - - iro iuc NA NA NA NA NA NA NA NAERR720263 Struve et al. USA 2010 human blood blood_sterile infection TG21980 KpI CG34 34 - - - - NA NA NA NA NA NA NA NAERR720245 Struve et al. USA 2005 human blood blood_sterile infection TG04605 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR720249 Struve et al. USA 1999 human respiratory tract respiratory unknown TG12354 KpI CG36 36 ybt - - - 3 71 ICEKp4 absent 10 NA NA NAERR720264 Struve et al. USA 2010 human blood blood_sterile infection TG21982 KpI CG37 37 ybt - - - 4 123 ICEKp8 absent 3 NA NA NAERR720248 Struve et al. USA 2006 human respiratory tract respiratory unknown TG12351 KpI CG37 37 - - - - NA NA NA NA NA NA NA NAERR720246 Struve et al. USA 2006 human blood blood_sterile infection TG12333 KpI n/a 62 ybt - - - 1? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR713646 Struve et al. unknown unknown human unknown unknown infection 8045 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR713645 Struve et al. unknown unknown human unknown unknown infection A5054 KpI ST82 82 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR706868 Struve et al. USA 2005 human liver abscess liver infection CAS688 KpI CG86 86 ybt - iro iuc 3 204 ICEKp3 absent 9 NA NA NAERR720262 Struve et al. USA 2011 human blood blood_sterile infection TG21976 KpI n/a 192 - - - - NA NA NA NA NA NA NA NAERR713647 Struve et al. Denmark 1990-1992 human blood blood_sterile infection Sp29 KpI n/a 249 - - - - NA NA NA NA NA NA NA NAERR713648 Struve et al. Denmark 1990-1992 human blood blood_sterile infection Sp221 KpI n/a 249 ybt clb iro iucAB ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR720265 Struve et al. USA 2010 human urine urine unknown TG21984 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR727149 Struve et al. USA 2011 human urine urine unknown TG21996 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR727150 Struve et al. USA 2011 human urine urine unknown TG22026 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR727151 Struve et al. USA 2011 human urine urine unknown TG22030 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR727152 Struve et al. USA 2010 human urine urine unknown TG22675 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR727153 Struve et al. USA 2010 human urine urine unknown TG22706 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR727156 Struve et al. USA 2010 human urine urine unknown TG22672 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR720255 Struve et al. USA unknown unknown unknown unknown unknown TG21539 KpI CG258 258 - - - - NA NA NA NA NA NA NA NAERR720256 Struve et al. USA 2008 unknown unknown unknown unknown TG21545 KpI CG258 258 ybt clb - - 1 251 ICEKp10 present 17 3 no noERR713523 Struve et al. Taiwan 1996 human liver abscess liver infection CAS686 KpI CG23 260 ybt clb iro iuc 1 50 ICEKp10 present 1 2 no noERR720259 Struve et al. USA unknown unknown unknown unknown unknown TG21587 KpI CG65 375 - - - - NA NA NA NA NA NA NA NAERR720250 Struve et al. USA 1999 human respiratory tract respiratory unknown TG12357 KpI n/a 416 - - - - NA NA NA NA NA NA NA NAERR720251 Struve et al. USA 1999 human respiratory tract respiratory unknown TG12366 KpI n/a 416 - - - - NA NA NA NA NA NA NA NAERR732499 Struve et al. USA 2000 human respiratory tract respiratory unknown TG12369 KpI n/a 416 - - - - NA NA NA NA NA NA NA NAERR720261 Struve et al. USA 2011 human blood blood_sterile infection TG21974 KpI n/a 461 - - - - NA NA NA NA NA NA NA NAERR727148 Struve et al. USA 2010 human urine urine unknown TG21950 KpI n/a 461 - - - - NA NA NA NA NA NA NA NAERR726901 Struve et al. USA 2010 human urine urine unknown TG21942 KpI n/a 584 - - - - NA NA NA NA NA NA NA NAERR720252 Struve et al. USA 2000 human respiratory tract respiratory unknown TG12372 KpI CG34 1521 - - - - NA NA NA NA NA NA NA NAERR732774 Struve et al. USA 2006 human blood blood_sterile infection TG04609 KpI CG147 1709 - - - - NA NA NA NA NA NA NA NAERR720253 Struve et al. USA 2000 human respiratory tract respiratory unknown TG12378 KpI n/a 5001 - - - - NA NA NA NA NA NA NA NAERR732775 Struve et al. USA 2006 human respiratory tract respiratory unknown TG01970 KpI n/a 5024 - - - - NA NA NA NA NA NA NA NAERR720244 Struve et al. USA 2005 human blood blood_sterile infection TG04601 KpI CG258 5117 - - - - NA NA NA NA NA NA NA NAERR720247 Struve et al. USA 2006 human blood blood_sterile infection TG12336 KpI n/a 5118 - - - - NA NA NA NA NA NA NA NAERR712902 Struve et al. South Africa 1996 human pneumonia respiratory infection CAS990 KpI n/a 5299 ybt clb iro iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR230425 Wand et al. unknown 1932 unknown unknown unknown unknown M109 KpI CG23 23 - - iro iuc NA NA NA NA NA NA NA NAERR204293 Wand et al. unknown 1940 human stool intestinal carriage M295 KpI CG35 35 - - - - NA NA NA NA NA NA NA NAERR230399 Wand et al. unknown 1937 human blood blood_sterile infection M44 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR230435 Wand et al. unknown 1941 human pneumonia respiratory infection M175A KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR230441 Wand et al. unknown 1940 human pneumonia respiratory infection M124 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR314323 Wand et al. unknown 1949 human pneumonia respiratory infection M342 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR279266 Wand et al. unknown 1940 human Acute cholecystitis unknown infection M636 KpI ST82 82 - - iroD iuc NA NA NA NA NA NA NA NAERR230400 Wand et al. unknown 1940 human antral washout unknown unknown M69 KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NAERR230383 Wand et al. unknown 1935 human unknown unknown unknown M42 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR279255 Wand et al. unknown 1935 human unknown unknown unknown M665 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR230407 Wand et al. unknown 1940 unknown unknown unknown unknown M45 KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NAERR230443 Wand et al. unknown 1935 unknown unknown unknown unknown M176 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR279212 Wand et al. unknown 1947 unknown unknown unknown unknown M588 KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NAERR279213 Wand et al. unknown 1947 unknown unknown unknown unknown M587 KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NAERR279215 Wand et al. unknown 1932 unknown unknown unknown unknown M584 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR279216 Wand et al. unknown 1932 unknown unknown unknown unknown M583 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR279267 Wand et al. unknown 1940 unknown unknown unknown unknown M635 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR314324 Wand et al. unknown 1946 unknown unknown unknown unknown M343 KpI ST82 82 - - iroD - NA NA NA NA NA NA NA NAERR314326 Wand et al. unknown 1940 unknown unknown unknown unknown M345 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR314329 Wand et al. unknown 1949 unknown unknown unknown unknown M371 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR314330 Wand et al. unknown 1949 unknown unknown unknown unknown M372 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR314345 Wand et al. unknown 1940 unknown unknown unknown unknown M414 KpI ST82 82 - - iro iuc NA NA NA NA NA NA NA NAERR279244 Wand et al. unknown 1940 human pneumonia respiratory infection M404 KpI CG90 90 - - - iuc NA NA NA NA NA NA NA NAERR314344 Wand et al. unknown 1940 human pneumonia respiratory infection M403 KpI CG90 90 - - - iuc NA NA NA NA NA NA NA NAERR314340 Wand et al. unknown 1940 human antral washout respiratory infection M398 KpI CG90 91 ybt - - iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR314341 Wand et al. unknown 1940 human antral washout respiratory infection M399 KpI CG90 91 ybt - - iuc ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR314342 Wand et al. unknown 1940 human antral washout respiratory infection M400 KpI CG90 91 ybt - - - ? EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDED EXCLUDEDERR279259 Wand et al. unknown 1941 human antrum unknown unknown M654 KpI CG90 91 ybt - - iuc 4 114 ICEKp4 absent 10 NA NA NAERR279265 Wand et al. unknown unknown unknown unknown unknown unknown M637_NCTC20298 KpI CG90 91 ybt - - iuc ? 318 ICEKp4 present 10 NA NA NAERR314350 Wand et al. unknown 1940 human tonsil unknown unknown M433 KpI CG90 93 ybt - - iuc 4 74 ICEKp4 absent 10 NA NA NAERR230391 Wand et al. unknown 1940 human nasopharynx pus pus unknown M43 KpI CG90 5086 - - - - NA NA NA NA NA NA NA NAERR204292 Wand et al. unknown 1940 human bile unknown unknown M19_NCTC20014 KpI CG29 5088 ybt - - - 4 97 ICEKp4 absent 10 NA NA NAERR314347 Wand et al. unknown 1940 human urine urine infection M426 KpI n/a 5089 - - - - NA NA NA NA NA NA NA NA