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Allow numeric sample names in read.vcf #2

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zkamvar opened this issue Aug 29, 2014 · 1 comment
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Allow numeric sample names in read.vcf #2

zkamvar opened this issue Aug 29, 2014 · 1 comment

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@zkamvar
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zkamvar commented Aug 29, 2014

When reading in the vcf file with read.vcf, sample names such as 2968 are coverted to X2968 because of the default argument check.names = TRUE in the function read.table on line 252. If you change it to FALSE, numeric sample
@zkamvar zkamvar changed the title Allow numeric sample names Allow numeric sample names in read.vcf Aug 29, 2014
@knausb knausb closed this as completed Aug 31, 2014
@knausb
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knausb commented Aug 31, 2014

Thank you for the suggestion and thank you more for the proposed solution! I've made the change. Please let me know if you have troubles with it.

This was referenced May 4, 2016
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@jessepoland jessepoland mentioned this issue Mar 19, 2019
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@zkamvar @knausb