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initialize.py
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initialize.py
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# -*- coding: utf-8 -*-
"""
Initialization Scripts for a thousand of init lines
Created on Sat Mar 22 13:05:08 2014
All rights reserved by David Weber
@author: David Weber
"""
global _self
_self = None
import config
def init_files(_self):
_self.f_li0 = None
_self.f_li1 = None
_self.f_li3 = None
_self.f_li4 = None
_self.f_agilent_voltage = None
_self.f_agilent_current = None
_self.f_motor = None
_self.f_temp = None
_self.f_ips = None
_self.f_ips_2 = None
_self.f_femto = None
_self.f_config = None
_self.hdf5_file = None
def open_files():
from functions import close_logfile,set_logfile
import os
import hdf5_interface
if not _self.f_li0 == None:
_self.f_li0.close()
_self.f_li1.close()
_self.f_li3.close()
_self.f_li4.close()
_self.f_agilent_voltage.close()
_self.f_agilent_current.close()
_self.f_motor.close()
_self.f_temp.close()
_self.f_itc.close()
_self.f_femto.close()
_self.f_ips.close()
_self.f_ips_2.close()
if not _self.f_config == None:
_self.f_config.close()
if not _self.hdf5_file == None:
_self.hdf5_file.close()
close_logfile()
d = str(_self.ui.editSetupDir.text())+str(_self.ui.editHeader.text())+"\\"
d_name = os.path.dirname(d)
if not os.path.exists(d_name):
os.makedirs(d_name)
if config.save_good_old_txt:
_self.f_li0 = open(d+"li0.txt", 'a') # TODO os.path.join()
_self.f_li1 = open(d+"li1.txt", 'a')
_self.f_li3 = open(d+"li3.txt", 'a')
_self.f_li4 = open(d+"li4.txt", 'a')
_self.f_agilent_voltage = open(d+"agilent_new.txt", 'a')
_self.f_agilent_current = open(d+"agilent_old.txt", 'a')
_self.f_femto = open(d+"femto.txt", 'a')
_self.f_motor = open(d+"motor.txt", 'a')
_self.f_temp = open(d+"temp.txt", 'a')
_self.f_itc = open(d+"itc.txt", 'a')
_self.f_ips = open(d+"ips.txt", 'a')
_self.f_ips_2 = open(d+"ips_2.txt", 'a')
_self.f_config = open(d+"config.txt", 'a')
_self.hdf5_file = hdf5_interface.hdf5_saving(d)
set_logfile(d+"log.txt")
def close_files():
from functions import close_logfile,log
if not _self.f_li0 == None:
try:
_self.f_li0.close()
_self.f_li1.close()
_self.f_li3.close()
_self.f_li4.close()
_self.f_femto.close()
_self.f_motor.close()
_self.f_temp.close()
_self.f_itc.close()
_self.f_ips.close()
_self.f_ips_2.close()
except Exception,e:
log("Failed to Close a File",e)
if not _self.f_config == None:
try:
_self.f_config.close()
except Exception,e:
log("Failed to Close Config File",e)
_self.f_li0 = None
_self.f_li1 = None
_self.f_li3 = None
_self.f_li4 = None
_self.f_agilent_voltage = None
_self.f_agilent_current = None
_self.f_femto = None
_self.f_motor = None
_self.f_temp = None
_self.f_itc = None
_self.f_ips = None
_self.f_ips_2 = None
_self.f_config = None
if not _self.hdf5_file == None:
try:
_self.hdf5_file.close()
except Exception,e:
log("Failed to Close HDF5 File",e)
_self.hdf5_file = None
close_logfile()
def write_config(text):
from functions import log
try:
if not _self.f_config == None:
_self.f_config.write(text)
_self.f_config.flush()
except Exception,e:
log("Failed to write config",e)
def init_curvewidgets(_self):
from guiqwt.builder import make
_self.data_curve1 = make.curve([],[])
_self.data_curve2 = make.curve([],[], yaxis="right", color="b")
_self.data_curve3 = make.curve([],[])
_self.data_curve4 = make.curve([],[], yaxis="right", color="b")
_self.data_curve5 = make.curve([],[]) # magnet
_self.data_curve5b = make.curve([],[], color="G") # magnet 2
_self.data_curve6 = make.curve([],[], yaxis="right", color="b")
_self.data_curve6b = make.curve([],[], yaxis="right", color="g")
_self.data_curve6c = make.curve([],[], yaxis="right", color="y")
_self.data_curve6d = make.curve([],[], yaxis="right", color="r")
_self.data_curve6e = make.curve([],[], yaxis="right", color="l")
_self.data_curve7 = make.curve([],[])
_self.data_curve8 = make.curve([1],[1], yaxis="right", color="b")
_self.data_curve8b = make.curve([1],[1], yaxis="right", color="g")
_self.data_curve9 = make.curve([],[], linestyle="NoPen", marker="Rect", markersize=3, markeredgecolor="k", markerfacecolor="b") # SolidLine NoPen
_self.data_curve10 = make.curve([],[],yaxis="right",color="b")
_self.data_curve11 = make.curve([],[], linestyle="NoPen", marker="Rect" ,markersize=3, markeredgecolor="k", markerfacecolor="k") # SolidLine NoPen
_self.data_curve12 = make.curve([],[], yaxis="right", linestyle="NoPen", marker="Ellipse", markersize=4, markeredgecolor="k",markerfacecolor="r") # SolidLine NoPen
_self.ui.cw1.plot.set_axis_title(_self.ui.cw1.plot.Y_LEFT, "AUX0/Sample")
_self.ui.cw1.plot.set_axis_title(_self.ui.cw1.plot.Y_RIGHT, "AUX1/RRef")
_self.ui.cw1.plot.set_axis_color(_self.ui.cw1.plot.Y_RIGHT, "MediumBlue")
_self.ui.cw2.plot.set_axis_title(_self.ui.cw2.plot.Y_LEFT, "Motor Position")
_self.ui.cw2.plot.set_axis_title(_self.ui.cw2.plot.Y_RIGHT, "Motor Speed (RPM)")
_self.ui.cw2.plot.set_axis_color(_self.ui.cw2.plot.Y_RIGHT, "MediumBlue")
_self.ui.cw3.plot.set_axis_title(_self.ui.cw3.plot.Y_LEFT, "Magnet (B)")
_self.ui.cw3.plot.set_axis_title(_self.ui.cw3.plot.Y_RIGHT, "Temperatures (K)")
_self.ui.cw3.plot.set_axis_color(_self.ui.cw3.plot.Y_RIGHT, "MediumBlue")
_self.ui.cw4.plot.set_axis_title(_self.ui.cw4.plot.Y_LEFT, "Resistance (Ohm)")
_self.ui.cw4.plot.set_axis_title(_self.ui.cw4.plot.Y_RIGHT, "Conductance (Go)")
_self.ui.cw4.plot.set_axis_color(_self.ui.cw4.plot.Y_RIGHT, "MediumBlue")
_self.ui.cw4.plot.set_axis_scale(_self.ui.cw4.plot.Y_RIGHT, "log")
_self.ui.cw5.plot.set_axis_title(_self.ui.cw5.plot.Y_LEFT, "I (A)")
_self.ui.cw5.plot.set_axis_title(_self.ui.cw5.plot.Y_RIGHT, "dI/dV")
_self.ui.cw5.plot.set_axis_title(_self.ui.cw5.plot.X_BOTTOM, "Voltage (V)")
_self.ui.cw6.plot.set_axis_title(_self.ui.cw6.plot.Y_LEFT, "d2I/dV2 Sample")
_self.ui.cw6.plot.set_axis_color(_self.ui.cw6.plot.Y_RIGHT, "MediumBlue")
_self.ui.cw6.plot.set_axis_title(_self.ui.cw6.plot.Y_RIGHT, "d2I/dV2 Reference")
_self.ui.cw6.plot.set_axis_title(_self.ui.cw6.plot.X_BOTTOM, "Voltage (V)")
_self.ui.cw6.plot.set_axis_color(_self.ui.cw6.plot.Y_RIGHT, "DarkRed")
_self.ui.cw1.plot.add_item(_self.data_curve1)
_self.ui.cw1.plot.add_item(_self.data_curve2)
_self.ui.cw2.plot.add_item(_self.data_curve3)
_self.ui.cw2.plot.add_item(_self.data_curve4)
_self.ui.cw3.plot.add_item(_self.data_curve5)
_self.ui.cw3.plot.add_item(_self.data_curve5b)
_self.ui.cw3.plot.add_item(_self.data_curve6)
_self.ui.cw3.plot.add_item(_self.data_curve6b)
_self.ui.cw3.plot.add_item(_self.data_curve6c)
_self.ui.cw3.plot.add_item(_self.data_curve6d)
_self.ui.cw3.plot.add_item(_self.data_curve6e)
_self.ui.cw4.plot.add_item(_self.data_curve7)
_self.ui.cw4.plot.add_item(_self.data_curve8)
_self.ui.cw4.plot.add_item(_self.data_curve8b)
_self.ui.cw5.plot.add_item(_self.data_curve9)
_self.ui.cw5.plot.add_item(_self.data_curve10)
_self.ui.cw6.plot.add_item(_self.data_curve11)
_self.ui.cw6.plot.add_item(_self.data_curve12)
_self.ui.cw1.plot.enable_used_axes()
_self.ui.cw2.plot.enable_used_axes()
_self.ui.cw3.plot.enable_used_axes()
_self.ui.cw4.plot.enable_used_axes()
_self.ui.cw5.plot.enable_used_axes()
_self.ui.cw6.plot.enable_used_axes()
def init_variables(_self):
import time
_self._start_time = time.time()
# holds data to plot in specialized plots
_self.plot_data = {}
_self.plot_data["new"] = [False,False,False,False]
_self.plot_data["save"] = False
_self.plot_data["x1"] = []
_self.plot_data["y1"] = []
_self.plot_data["x2"] = []
_self.plot_data["y2"] = []
_self.plot_data["x3"] = []
_self.plot_data["y3"] = []
_self.plot_data["x4"] = []
_self.plot_data["y4"] = []
# holds all the data read from devices
_self.data = {}
_self.data["li_timestamp_0"] = []
_self.data["li_aux0"] = []
_self.data["li_aux1"] = []
_self.data["li_0_x"] = []
_self.data["li_0_y"] = []
_self.data["li_timestamp_1"] = []
_self.data["li_1_x"] = []
_self.data["li_1_y"] = []
_self.data["li_timestamp_3"] = []
_self.data["li_3_x"] = []
_self.data["li_3_y"] = []
_self.data["li_timestamp_4"] = []
_self.data["li_4_x"] = []
_self.data["li_4_y"] = []
_self.data["agilent_voltage_timestamp"] = []
_self.data["agilent_voltage_voltage"] = []
_self.data["agilent_current_timestamp"] = []
_self.data["agilent_current_voltage"] = []
_self.data["motor_timestamp"] = []
_self.data["motor_pos"] = []
_self.data["motor_cur"] = []
_self.data["motor_vel"] = []
_self.data["temp_timestamp"] = []
_self.data["temp1"] = []
_self.data["temp2"] = []
_self.data["itc_timestamp"] = []
_self.data["itc_temp1"] = []
_self.data["itc_temp2"] = []
_self.data["itc_temp3"] = []
_self.data["ips_timestamp"] = []
_self.data["ips_mfield"] = []
_self.data["ips_2_timestamp"] = []
_self.data["ips_2_mfield"] = []
_self.data["femto_timestamp"] = []
_self.data["femto_channela"] = []
_self.data["femto_channelb"] = []
# holds some config data like offset
_self.config_data = {}
_self.config_data["lockin_phases"] = [0,0,0,0]
_self.config_data["main_index"] = 0
_self.config_data["sub_index"] = 0
# holds all the fields and boxes of the form with recent values
_self.form_data = {}
# amplifiers
_self.config_data["offset_agilent_voltage"] = [0,0,0,0]
_self.config_data["offset_agilent_current"] = [0,0,0,0]
_self.config_data["offset_agilent_voltage"][0] = float(_self.ui.editOffsetVoltage.text())
_self.config_data["offset_agilent_current"][0] = float(_self.ui.editOffsetCurrent.text())
_self.config_data["offset_agilent_voltage"][1] = float(_self.ui.editOffsetVoltage_2.text())
_self.config_data["offset_agilent_current"][1] = float(_self.ui.editOffsetCurrent_2.text())
_self.config_data["offset_agilent_voltage"][2] = float(_self.ui.editOffsetVoltage_3.text())
_self.config_data["offset_agilent_current"][2] = float(_self.ui.editOffsetCurrent_3.text())
_self.config_data["offset_agilent_voltage"][3] = float(_self.ui.editOffsetVoltage_4.text())
_self.config_data["offset_agilent_current"][3] = float(_self.ui.editOffsetCurrent_4.text())
_self.config_data["offset_voltage"] = 0
_self.config_data["offset_current"] = 0
_self.config_data["range_voltage"] = 1
_self.config_data["range_current"] = 1
_self.factor_voltage = float(_self.ui.editFactorVoltage.text())
_self.factor_current = float(_self.ui.editFactorCurrent.text())
_self._excluded_splits = ["timestamp","li","femto"]
_self.histogram_in_progress = False
_self.iv_in_progress = False
def init_shutdowns(_self):
_self.stop_measure = False
_self.shutdown = False
_self.temp_sweep_abort = False
_self.offset_in_progress = False
def init_validators(_self):
from PyQt4 import QtCore, QtGui
# validators
intValidator = QtGui.QIntValidator()
intValidator.setLocale(QtCore.QLocale(QtCore.QLocale.English, QtCore.QLocale.UnitedStates))
doubleValidator = QtGui.QDoubleValidator()
doubleValidator.setLocale(QtCore.QLocale(QtCore.QLocale.English, QtCore.QLocale.UnitedStates))
# histogram
_self.ui.editHistogramBias.setValidator(doubleValidator)
_self.ui.editHistogramLower.setValidator(doubleValidator)
_self.ui.editHistogramUpper.setValidator(doubleValidator)
_self.ui.editHistogramOpeningSpeed.setValidator(intValidator)
_self.ui.editHistogramClosingSpeed.setValidator(intValidator)
# motor
_self.ui.editLowerLimit.setValidator(doubleValidator)
_self.ui.editUpperLimit.setValidator(doubleValidator)
_self.ui.editSpeed.setValidator(intValidator)
# view
_self.ui.editViewBegin.setValidator(intValidator)
_self.ui.editViewEnd.setValidator(intValidator)
_self.ui.editViewStep.setValidator(intValidator)
_self.ui.editTimerInterval.setValidator(intValidator)
_self.ui.editMaximumValues.setValidator(intValidator)
# iv
_self.ui.editIVTime.setValidator(intValidator)
_self.ui.editIVMin.setValidator(doubleValidator)
_self.ui.editIVMax.setValidator(doubleValidator)
# temperature
_self.ui.editTempSetpoint.setValidator(doubleValidator)
_self.ui.editTempHeater.setValidator(intValidator)
_self.ui.editTempP.setValidator(intValidator)
_self.ui.editTempI.setValidator(intValidator)
_self.ui.editTempD.setValidator(intValidator)
_self.ui.editTempSweepStart.setValidator(doubleValidator)
_self.ui.editTempSweepStop.setValidator(doubleValidator)
_self.ui.editTempSweepStep.setValidator(doubleValidator)
_self.ui.editTempSweepDelay.setValidator(doubleValidator)
# b-field
_self.ui.editBMax.setValidator(doubleValidator)
_self.ui.editBRate.setValidator(doubleValidator)
# lockin
_self.ui.editLIFreq.setValidator(doubleValidator)
_self.ui.editLITC.setValidator(doubleValidator)
_self.ui.editLIAmpl.setValidator(doubleValidator)
_self.ui.editRate.setValidator(intValidator)
# setup
_self.ui.editFactorVoltage.setValidator(intValidator)
_self.ui.editFactorCurrent.setValidator(intValidator)
def init_connections(_self):
from PyQt4 import QtCore
import gui_helper
QtCore.QObject.connect(_self.ui.btnUltraStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_Ultra)
QtCore.QObject.connect(_self.ui.btnHistogramStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_Histogram)
QtCore.QObject.connect(_self.ui.btnIVStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_IV)
QtCore.QObject.connect(_self.ui.btnBCircleStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_B_Circle)
QtCore.QObject.connect(_self.ui.btnBSweepStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_B_Sweep)
QtCore.QObject.connect(_self.ui.btnBIVMapStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_B_IV_Map)
QtCore.QObject.connect(_self.ui.btnSwitchingStart, QtCore.SIGNAL("clicked()"), _self.measurement_btn_Acquire_Switching)
QtCore.QObject.connect(_self.ui.btnNature, QtCore.SIGNAL("clicked()"), gui_helper.send_to_nature)
QtCore.QObject.connect(_self.ui.btnResetBeginTime, QtCore.SIGNAL("clicked()"), gui_helper.reset_begin_times)
QtCore.QObject.connect(_self.ui.btnInitDevices, QtCore.SIGNAL("clicked()"), gui_helper.init_device_parameters)
QtCore.QObject.connect(_self.ui.btnBStart, QtCore.SIGNAL("clicked()"), gui_helper.magnet_goto)
QtCore.QObject.connect(_self.ui.btnBInitMagnet, QtCore.SIGNAL("clicked()"), gui_helper.magnet_init)
QtCore.QObject.connect(_self.ui.btnBZeroMagnet, QtCore.SIGNAL("clicked()"), gui_helper.magnet_zero)
QtCore.QObject.connect(_self.ui.btnSwitchHeaterOn, QtCore.SIGNAL("clicked()"), gui_helper.switchheater_on)
QtCore.QObject.connect(_self.ui.btnSwitchHeaterOff, QtCore.SIGNAL("clicked()"), gui_helper.switchheater_off)
QtCore.QObject.connect(_self.ui.btnBStart_2, QtCore.SIGNAL("clicked()"), gui_helper.magnet_goto_2)
QtCore.QObject.connect(_self.ui.btnBInitMagnet_2, QtCore.SIGNAL("clicked()"), gui_helper.magnet_init_2)
QtCore.QObject.connect(_self.ui.btnBZeroMagnet_2, QtCore.SIGNAL("clicked()"), gui_helper.magnet_zero_2)
QtCore.QObject.connect(_self.ui.btnSwitchHeaterOn_2, QtCore.SIGNAL("clicked()"), gui_helper.switchheater_on_2)
QtCore.QObject.connect(_self.ui.btnSwitchHeaterOff_2, QtCore.SIGNAL("clicked()"), gui_helper.switchheater_off_2)
QtCore.QObject.connect(_self.ui.btnMeasurementStop, QtCore.SIGNAL("clicked()"), gui_helper.measurement_btn_Stop)
QtCore.QObject.connect(_self.ui.btnUnbreak, QtCore.SIGNAL("clicked()"), gui_helper.motor_unbreak)
QtCore.QObject.connect(_self.ui.btnBreak, QtCore.SIGNAL("clicked()"), gui_helper.motor_break)
QtCore.QObject.connect(_self.ui.btnStop, QtCore.SIGNAL("clicked()"), gui_helper.motor_stop)
QtCore.QObject.connect(_self.ui.btnMotorHome, QtCore.SIGNAL("clicked()"), gui_helper.motor_home)
QtCore.QObject.connect(_self.ui.btnMotorSetLimit, QtCore.SIGNAL("clicked()"), gui_helper.motor_set_limit)
QtCore.QObject.connect(_self.ui.btnSetBias, QtCore.SIGNAL("clicked()"), gui_helper.set_bias)
QtCore.QObject.connect(_self.ui.btnBiasInvert, QtCore.SIGNAL("clicked()"), gui_helper.bias_invert)
QtCore.QObject.connect(_self.ui.btnSaveStart, QtCore.SIGNAL("clicked()"), open_files)
QtCore.QObject.connect(_self.ui.btnSaveStop, QtCore.SIGNAL("clicked()"), close_files)
QtCore.QObject.connect(_self.ui.btnSaveDescription, QtCore.SIGNAL("clicked()"), gui_helper.save_description)
QtCore.QObject.connect(_self.ui.btnOffset, QtCore.SIGNAL("clicked()"), _self.offset_correct)
QtCore.QObject.connect(_self.ui.btnLockinSet, QtCore.SIGNAL("clicked()"), gui_helper.lockin_set)
QtCore.QObject.connect(_self.ui.btnLIReadPhase, QtCore.SIGNAL("clicked()"), gui_helper.lockin_read_phase)
QtCore.QObject.connect(_self.ui.btnLIZeroPhase, QtCore.SIGNAL("clicked()"), gui_helper.lockin_set_phase)
QtCore.QObject.connect(_self.ui.btnLIResync, QtCore.SIGNAL("clicked()"), gui_helper.lockin_resync)
QtCore.QObject.connect(_self.ui.btnTempSet, QtCore.SIGNAL("clicked()"), gui_helper.set_temp_parameters)
QtCore.QObject.connect(_self.ui.btnTempSweep, QtCore.SIGNAL("clicked()"), _self.temp_sweep)
QtCore.QObject.connect(_self.ui.btnTempSweepStop, QtCore.SIGNAL("clicked()"), gui_helper.temp_sweep_stop)
QtCore.QObject.connect(_self.ui.btnTemperatureCustom, QtCore.SIGNAL("clicked()"), gui_helper.temp_custom)
QtCore.QObject.connect(_self.ui.btnExecute, QtCore.SIGNAL("clicked()"), _self.execute)
QtCore.QObject.connect(_self.ui.btnFemtoSet, QtCore.SIGNAL("clicked()"), gui_helper.femto_set)
# switching
QtCore.QObject.connect(_self.ui.btnSwitchSetHigh, QtCore.SIGNAL("clicked()"), gui_helper.switch_high)
QtCore.QObject.connect(_self.ui.btnSwitchSetLow, QtCore.SIGNAL("clicked()"), gui_helper.switch_low)
#QtCore.QObject.connect(_self.ui.editBias, QtCore.SIGNAL("clicked()"), gui_helper.lockin_resync)