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Read length #33

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jloupe opened this issue May 1, 2018 · 2 comments
Closed

Read length #33

jloupe opened this issue May 1, 2018 · 2 comments

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@jloupe
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jloupe commented May 1, 2018

We have been using the Aquas pipeline successfully with 75bp SE reads. However, our sequencing core is adding NovaSeq machines that will at minimum give 100bp reads. Is there an advantage/disadvantage to the extra read length? Will we need to change anything in the pipeline to adjust for this difference?

Thank you in advance!
@akundaje
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akundaje commented May 1, 2018

No change. The pipeline will work just fine.

@jloupe
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jloupe commented May 1, 2018

That's great, thank you for the quick response!

@jloupe jloupe closed this as completed May 1, 2018
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@akundaje @jloupe