Created: 2022/08/11 11:02:25 Last modified: 2022/08/18 13:15:33
- Aim: This document documents/describes basecalling for this project
- Prerequisite software: slurm v20.11.6, GNU coreutils
- OS: ORAC (CentOS Linux) (ESR production network)
The flowcell and kit information used in the basecalling script was found in the sequencing report file report_FAQ91555_20220804_0852_3fb67c88.md
Run bash script to get the run basecalling. See my script at ./scripts/02_basecalling/01_basecalling.sh
sbatch ./scripts/02_basecalling/01_basecalling.shRun bash script to get the merge the fastq files. See my script at ./scripts/02_basecalling/02_merge_fastq.sh
sbatch ./scripts/02_basecalling/02_merge_fastq.sh