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First of all, great tool to find the potential recombinants. Made my life easy.
I needed to parse the output of sc2rf only to get the potential recombinant sequences and the breakpoints of it. I see the --csvfile option in the README. But, it must not have been included in the sc2rf python executable. I get this error.
Hey!
First of all, great tool to find the potential recombinants. Made my life easy.
I needed to parse the output of sc2rf only to get the potential recombinant sequences and the breakpoints of it. I see the --csvfile option in the README. But, it must not have been included in the sc2rf python executable. I get this error.
sc2rf.py: error: unrecognized arguments: --csvfile output.csv
Any idea if I could get the ouput in the way I need?
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