Compiled linux with updated regions for p2 instances

cianfrocco-lab · Jul 14, 2017 · d12f58b · d12f58b
1 parent 1fe118a
commit d12f58b
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Showing 4 changed files with 3 additions and 3 deletions.
diff --git a/aws_build_linux/launch_AWS_instance.py b/aws_build_linux/launch_AWS_instance.py
diff --git a/aws_build_linux/qsub_aws b/aws_build_linux/qsub_aws
diff --git a/compile_repo.py b/compile_repo.py
@@ -5,7 +5,7 @@
 import subprocess
 
 notincluded=['aws_init.sh','rclone','rclone_mac','aws_init.sh','s3tmpout.txt']
-outdirname='aws_build_osx' #Choices: aws_build_linux, aws_build_osx
+outdirname='aws_build_linux' #Choices: aws_build_linux, aws_build_osx
 filelist=glob.glob('aws/*')
 
 for f in filelist: 

diff --git a/relion/qsub_aws_dev b/relion/qsub_aws_dev
@@ -3901,8 +3901,8 @@ def relion_autopick_mpi(project):
                 micdirlocation=indirlocation
                 cloudpath='/data/'+outdir
 		exec_remote_cmd('~/rclone sync rclonename:%s /data/%s --quiet --max-size 1G --transfers %i' %(bucketname.split('s3://')[-1],micpath,mpi*3))
-                if len(otherbucketDirName) > 0:
-			exec_remote_cmd('~/rclone sync rclonename:%s %s --quiet --transfers %i' %(bucketname.split('s3://')[-1],micpath,mpi*3))
+                #if len(otherbucketDirName) > 0:
+		#	exec_remote_cmd('~/rclone sync rclonename:%s %s --quiet  --max-size 1G --transfers %i' %(bucketname.split('s3://')[-1],micpath,mpi*3))
 
                 if gpu  == 1:
                         relion_remote_cmd='/home/EM_Packages/relion2.0/build/bin/relion_autopick %s --gpu ' %(relioncmd)