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ReadParseScoary.R not separating groups of genes #2

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TWhiteleyAPHA opened this issue Jul 8, 2022 · 0 comments
Open

ReadParseScoary.R not separating groups of genes #2

TWhiteleyAPHA opened this issue Jul 8, 2022 · 0 comments

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@TWhiteleyAPHA
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When I created scoary outputs using the --collapse flag, the groups of genes were separated by "--". Unfortunately ReadParseScoary.R only separates them at the second "-". Line 20 of needs to be changed from

genes_[i]<-sub("-\b.*", "",data_$Gene[i])

to

genes_[i]<-sub("--\b.*", "",data_$Gene[i])
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@TWhiteleyAPHA