| Project | ENCODE |
| Lab | Michael Snyder, Stanford |
| TF | CTCF (CCCTC-binding factor) |
| Bio sample | Homo sapiens K562 |
| Reference genome | GRCh38 |
| narrowPeak (bed) | ENCFF660GHM.bed.gz (md5sum = 2b9e2c2ba7afe8d64f5f3549ce16cf1a) |
| narrowPeak (bigBed) | ENCFF400DFR.bigBed (md5sum = 15bf51e2a37b8d93b44c8746b83583b4) |
| signal Pvalue (bigWig) | ENCFF336UPT.bigWig (md5sum = 883eb33a975e14130e142b98070b14c0) |
| Project | ENCODE |
| Lab | Michael Snyder, Stanford |
| TF | RAD21 |
| Bio sample | Homo sapiens K562 |
| Reference genome | GRCh38 |
| narrowPeak (bed) | ENCFF057JFH.bed.gz (md5sum = 0e638759eb09e8d0825d3d124b2c77d6) |
| narrowPeak (bigBed) | ENCFF066JWO.bigBed (md5sum = 92d3e303d3d880db5c9d604823e9831d) |
| signal Pvalue (bigWig) | ENCFF130GMP.bigWig (md5sum = c7e73bd2fba6a21a9d02da181e303578) |
These files can be used as genomic "background".
| Dataset (Human, GRCh38/hg38) | md5sum |
|---|---|
| remap2022_CRM_hg38_v1_0.bed.gz | 4717178cd730471f5ac897838c55847c |
| ENCODE_CCRE_hg38.bed.gz | a572f25b1f7a51283591f4afd8f0c3b7 |
| GeneHancer_v4.4_hg38.bed.gz | e6fbecf8f637db49ce12d1390c6285b6 |
| CpG_island_hg38.bed.gz | 8c783529fb4a8f86b1d90d70afa6a1f7 |
| Dataset (Mouse, GRCm39/mm39) | md5sum |
|---|---|
| remap2022_CRM_mm39_v1_0.bed.gz | 9c20058b6ab324f2292029566e59993a |
| Dataset (Fly, dm6) | md5sum |
|---|---|
| remap2022_CRM_dm6_v1_0.bed.gz | 3633180a8cba0495147682cc9b288aca |