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I thought I had successfully installed lipsia on my Ubuntu machine using Docker. However, when I try to run e.g. ECM, I get the following error:
Unable to find image 'lipsia:latest' locally
docker: Error response from daemon: pull access denied for lipsia,
repository does not exist or may require 'docker login'.
See 'docker run --help'.
So I tried docker login, which did not help. Docker images gives me
REPOSITORY TAG IMAGE ID CREATED SIZE
fb20ff7eb363 8 days ago 639MB
ubuntu 16.04 5f2bf26e3524 2 weeks ago 123MB
hello-world latest fce289e99eb9 10 months ago 1.84kB
so apparently, there is no lipsia image. I then tried to re-run the installation to see whether something/what went wrong there. I first got the following errors:
make -C utils/
make[1]: *** No targets specified and no makefile found. Stop.
make[1]: Entering directory '/opt/lipsia/src/utils'
make[1]: Leaving directory '/opt/lipsia/src/utils'
Makefile:25: recipe for target 'utils/' failed
make: *** [utils/] Error 2
The command '/bin/sh -c cd /opt && git clone https://github.com/lipsia-fmri/lipsia.git && cd lipsia && bash -c "source lipsia-setup.sh && cd src && make"' returned a non-zero code: 2
The first part seems to be a common error and I had that one before when I installed lipsia on another machine. However, on that machine it runs perfectly so I figured that cannot be the issue. I ran the second command separately, which worked fine. So I ended up with only this error:
make -C utils/
make[1]: Entering directory '/opt/lipsia/src/utils'
make[1]: *** No targets specified and no makefile found. Stop.
make[1]: Leaving directory '/opt/lipsia/src/utils'
Makefile:25: recipe for target 'utils/' failed
make: *** [utils/] Error 2
and still the same error as before (Unable to find image 'lipsia:latest' locally etc.) when trying to run a command with e.g.
Dear all,
I thought I had successfully installed lipsia on my Ubuntu machine using Docker. However, when I try to run e.g. ECM, I get the following error:
Unable to find image 'lipsia:latest' locally
docker: Error response from daemon: pull access denied for lipsia,
repository does not exist or may require 'docker login'.
See 'docker run --help'.
So I tried docker login, which did not help. Docker images gives me
REPOSITORY TAG IMAGE ID CREATED SIZE
fb20ff7eb363 8 days ago 639MB
ubuntu 16.04 5f2bf26e3524 2 weeks ago 123MB
hello-world latest fce289e99eb9 10 months ago 1.84kB
so apparently, there is no lipsia image. I then tried to re-run the installation to see whether something/what went wrong there. I first got the following errors:
make -C utils/
make[1]: *** No targets specified and no makefile found. Stop.
make[1]: Entering directory '/opt/lipsia/src/utils'
make[1]: Leaving directory '/opt/lipsia/src/utils'
Makefile:25: recipe for target 'utils/' failed
make: *** [utils/] Error 2
The command '/bin/sh -c cd /opt && git clone https://github.com/lipsia-fmri/lipsia.git && cd lipsia && bash -c "source lipsia-setup.sh && cd src && make"' returned a non-zero code: 2
The first part seems to be a common error and I had that one before when I installed lipsia on another machine. However, on that machine it runs perfectly so I figured that cannot be the issue. I ran the second command separately, which worked fine. So I ended up with only this error:
make -C utils/
make[1]: Entering directory '/opt/lipsia/src/utils'
make[1]: *** No targets specified and no makefile found. Stop.
make[1]: Leaving directory '/opt/lipsia/src/utils'
Makefile:25: recipe for target 'utils/' failed
make: *** [utils/] Error 2
and still the same error as before (Unable to find image 'lipsia:latest' locally etc.) when trying to run a command with e.g.
docker run lipsia vecm -in media/newvol/100206/MNINonLinear/Results/rfMRI_REST2_LRRL_hp2000_clean.nii.gz -mask /media/newvol/GMmask.nii.gz -out media/newvol/100206/MNINonLinear/Results/ECM_Jpos.v -j 4 -metric pos
I would be very thankful for every suggestion or help.
Thank you very much!
Best,
Franziska Goltz
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