/
coding.py
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/
coding.py
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import os
import collections
import gevent.queue
from headers import DataNodeHeader
from common import ClassLogger
from bufferedio import InputStreamReader, InputStream
from networking import Client
from galoisbuffer import GaloisBuffer
class CodingException(Exception):
pass
class TemporalBufferQueue(gevent.queue.Queue):
queues = {}
def __init__(self, name, *args, **kwargs):
super(TemporalBufferQueue, self).__init__(*args, **kwargs)
TemporalBufferQueue.queues[name] = self
@staticmethod
def get_temp(name):
return TemporalBufferQueue.queues[name]
@staticmethod
def delete_temp(name):
TemporalBufferQueue.pop(name)
@ClassLogger
class RemoteNetCodingReader(InputStreamReader):
def __init__(self, node_addr, block_id, coding_id, stream_id,
nodes, **kwargs):
nodes = ';'.join(map(str, nodes))
self.client = Client(*node_addr)
self.header = DataNodeHeader.generate(DataNodeHeader.OP_CODING,
block_id, coding_id, stream_id,
nodes)
self.client.send(self.header)
super(RemoteNetCodingReader, self).__init__(self.client.recv_stream(),
async=True, **kwargs)
def finalize(self, kill=False):
if not kill:
self.client.assert_ack()
super(RemoteNetCodingReader, self).finalize(kill)
@ClassLogger
class NetCodingResolver(object):
def __init__(self, block_id, stream_id, block_store, nodes):
self.stream_id = stream_id
self.block_id = block_id
self.block_store = block_store
self.nodes = nodes
def get_enc_node(self, coding_id):
return self.nodes[coding_id]
def get_reader(self, key):
assert False, "unimplemented"
def get_writer(self, key):
assert False, "unimplemented"
@ClassLogger
class NetCodingExecutor(object):
#FIXME: We need a process to monitor the queues and collect garbage!
queues = {}
sizes = {}
numreg = collections.defaultdict(int)
def __init__(self, operations, resolver, stream_id, bf=16):
self.stream_id = stream_id
self.operations = operations
self.resolver = resolver
self.finalized = False
self.bitfield_op = bf
# Create dictionaries
self.buffers = {}
self.readers = {}
self.writers = {}
if __debug__: self.logger.debug('New executor for %d %s.', os.getpid(),
self.stream_id)
if __debug__: self.logger.debug('Processing streams...')
for stream_name, stream_type in self.operations.streams:
if __debug__: self.logger.debug('Processing stream: %s.',
unicode(stream_name))
if stream_type=='r':
self.readers[stream_name] = self.resolver.\
get_reader(stream_name)
elif stream_type=='w':
self.writers[stream_name] = self.resolver.\
get_writer(stream_name)
else:
raise TypeError('Invalid operation stream.')
if __debug__: self.logger.debug('Processing streams finished.')
self.size = None
for reader in self.readers.itervalues():
s = reader.input_stream.size
if self.size==None:
self.size = s
elif self.size!=s:
raise CodingException('Reader sizes are not aligned: %d, %d.'\
%(self.size, s))
# If there is no input stream... (no fixed size) we
# try to get the size from a previous set executor in the same stream.
if self.size==None:
self.size = NetCodingExecutor.sizes[self.stream_id]
assert self.size!=None
if self.stream_id not in NetCodingExecutor.queues:
NetCodingExecutor.queues[self.stream_id] = collections\
.defaultdict(gevent.queue.Queue)
# Keep track of which iobuffers we have to free here.
self.disposable_buffers = set()
NetCodingExecutor.sizes[self.stream_id] = self.size
NetCodingExecutor.numreg[self.stream_id] += 1
def finalize(self):
if self.finalized:
return
self.finalized = True
'''
NetCodingExecutor.numreg[self.stream_id] -= 1
if NetCodingExecutor.numreg[self.stream_id] == 0:
del NetCodingExecutor.sizes[self.stream_id]
del NetCodingExecutor.queues[self.stream_id]
'''
if __debug__: self.logger.debug('Finalizing coding...')
for reader in self.readers.itervalues():
reader.finalize(True)
for writer in self.writers.itervalues():
writer.finalize()
if __debug__: self.logger.debug('Waiting for writers..')
for writer in self.writers.itervalues():
writer.join()
'''
if __debug__: self.logger.debug('Killing clients..')
for reader in self.readers.itervalues():
if isinstance(reader, RemoteNetCodingReader):
reader.finalize(kill)
'''
def execute_instruction(self, instruction):
if __debug__: self.logger.debug('NetCodingInputStream %s is '
'processing instruction %s',
self.stream_id, str(instruction))
bytes_processed = None
if instruction[0]=='COPY':
dst_buffer = self.buffers[instruction[1]]
src_buffer = self.buffers[instruction[2]]
src_buffer.copy_to(dst_buffer)
bytes_processed = dst_buffer.length
elif instruction[0]=='PUSH':
queue = instruction[1]
buff = self.buffers[instruction[2]]
#if __debug__: self.logger.debug("Non disposable: %d", id(buff))
self.disposable_buffers.remove(buff)
NetCodingExecutor.queues[self.stream_id][queue].put(buff)
bytes_processed = buff.length
elif instruction[0]=='POP':
assert self.stream_id in NetCodingExecutor.queues
queue = instruction[1]
buff = NetCodingExecutor.queues[self.stream_id][queue].get()
#if __debug__: self.logger.debug("Make disposable: %d", id(buff))
self.disposable_buffers.add(buff)
self.buffers[instruction[2]] = buff
bytes_processed = buff.length
elif instruction[0]=='LOAD':
buff = self.readers[instruction[2]].get()
self.buffers[instruction[1]] = buff
#if __debug__: self.logger.debug("Make disposable: %d", id(buff))
self.disposable_buffers.add(buff)
bytes_processed = self.buffers[instruction[1]].length
elif instruction[0]=='WRITE':
buff = self.buffers[instruction[1]]
dst_stream = self.writers[instruction[2]]
#if __debug__: self.logger.debug("Non disposable: %d", id(buff))
self.disposable_buffers.remove(buff)
dst_stream.write(buff)
bytes_processed = buff.length
elif instruction[0]=='IADD':
src_buffer = self.buffers[instruction[2]]
dst_buffer = self.buffers[instruction[1]]
src = GaloisBuffer(src_buffer.size, bitfield=self.bitfield_op,
buffer=src_buffer.buff)
dst = GaloisBuffer(dst_buffer.size, bitfield=self.bitfield_op,
buffer=dst_buffer.buff)
dst += src
dst_buffer.length = src_buffer.length
bytes_processed = dst_buffer.length
elif instruction[0]=='MULADD':
src_buffer = self.buffers[instruction[3]]
literal_value = instruction[2]
dst_buffer = self.buffers[instruction[1]]
if src_buffer.length==0:
raise CodingException('Empty buffer.')
if src_buffer.size!=dst_buffer.size:
self.logger.error('Buffer sizes are not aligned.')
raise CodingException('Buffers sizes are not aligned.')
src = GaloisBuffer(src_buffer.size, bitfield=self.bitfield_op,
buffer=src_buffer.buff)
dst = GaloisBuffer(dst_buffer.size, bitfield=self.bitfield_op,
buffer=dst_buffer.buff)
src.multadd(literal_value, dest=dst, add=True)
dst_buffer.length = src_buffer.length
bytes_processed = dst_buffer.length
elif instruction[0]=='MULT':
src_buffer = self.buffers[instruction[3]]
literal_value = instruction[2]
dst_buffer = self.buffers[instruction[1]]
if src_buffer.length==0:
raise CodingException('Empty buffer.')
if src_buffer.size!=dst_buffer.size:
self.logger.error('Buffer sizes are not aligned.')
raise CodingException('Buffer sizes are not aligned.')
src = GaloisBuffer(src_buffer.size, bitfield=self.bitfield_op,
buffer=src_buffer.buff)
dst = GaloisBuffer(dst_buffer.size, bitfield=self.bitfield_op,
buffer=dst_buffer.buff)
src.multadd(literal_value, dest=dst, add=False)
dst_buffer.length = src_buffer.length
bytes_processed = dst_buffer.length
else:
raise CodingException('Invalid coding instruction: %s'\
%(str(instruction)))
if bytes_processed==None:
raise CodingException('The number of processed bytes was not set '
'for instruction: %s'%(str(instruction)))
return bytes_processed
def execute_step(self, output=None):
bytes_processed = None
if self.operations.output!=None:
if output!=None:
self.buffers[self.operations.output] = output
else:
assert False
for instruction in self.operations.instructions:
bp = self.execute_instruction(instruction)
if bytes_processed!=None and bytes_processed!=bp:
raise CodingException('Buffer sizes are not aligned.')
bytes_processed = bp
# Release used buffers
for iobuffer in self.disposable_buffers:
iobuffer.free()
self.disposable_buffers.clear()
if __debug__: self.logger.debug('Coding processed %d bytes.',
bytes_processed)
return bytes_processed
def execute(self):
read = 0
while read<self.size:
if __debug__: self.logger.debug('execute iter %d/%d',
read, self.size)
read += self.execute_step()
yield read
@ClassLogger
class NetCodingInputStream(InputStream):
def __init__(self, executor):
self.executor = executor
super(NetCodingInputStream, self).__init__(self.executor.size)
def finalize(self):
super(NetCodingInputStream, self).finalize()
self.executor.finalize()
def read(self, iobuffer, nbytes=None):
if nbytes==None:
nbytes = iobuffer.size
else:
nbytes = min(iobuffer.size, nbytes)
if __debug__: self.logger.debug('Reading %d bytes from '
'NetCodingInputStream %s.', nbytes,
hex(id(self)))
num_read = self.executor.execute_step(iobuffer)
if __debug__: self.logger.debug('Coding processed %d bytes.', num_read)
assert num_read==iobuffer.length, (num_read,iobuffer.length)
return num_read
class NetCodingOperations(object):
def __init__(self, node, streams=[], output=None):
self.node = node
self.streams = streams
self.output = output
self.instructions = []
def add(self, inst):
self.instructions.append(inst)
def is_stream(self):
return self.output!=None